Gvermi12364.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi12364.t1
Unique NameGvermi12364.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length449
Homology
BLAST of Gvermi12364.t1 vs. uniprot
Match: A0A2V3IEW4_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IEW4_9FLOR)

HSP 1 Score: 288 bits (736), Expect = 5.450e-92
Identity = 138/232 (59.48%), Postives = 178/232 (76.72%), Query Frame = 0
Query:  180 AVKRAVENEDPDDDELKESMRTLVSQSRDXXXXXXXXPDNILEREREVAREADYQ--VTSRGIGNVGDFFKIVMRPMETFIFGRLMKRGQRVGEVMGSVIGKIMRASETRMKVCLMANSLGAHVLVGLLNRPHTLPYKLHTVFFVQGAIAQEYFEDGGRFGHVKEFVAGPVVVSHSEHDRMLRNVFGWFHGIAIGYSGTPAGASCRMKALSEIDEDPYSFECGEWNNIDGSE 409
            A+  +V NEDPDDD+LK++MR+LV +SR         PD ++ERE+EV+R+   Q  V +RG+ N+   F  VMRP ET +FGRLMKRGQRVG VMGSV+GK+M+A+E R KVC+MANSLGA VL GLLNRPH LPYK+HT+FFVQGAIA+++F  G ++G+V E VAGPV+ ++S+ D +LRN+FGWFHGIAIG+ GTP G   RMK L E+ +DPY F C  WNN+DG+E
Sbjct:   27 AMLLSVLNEDPDDDDLKQAMRSLVVESRVDDNDDEEDPDTVVEREQEVSRQQGSQEVVENRGLNNI---FTTVMRPFETVVFGRLMKRGQRVGHVMGSVLGKLMKATEDRRKVCVMANSLGAQVLCGLLNRPHQLPYKIHTIFFVQGAIAKDWFHPGAKYGYVHEVVAGPVLCTYSQRDLLLRNIFGWFHGIAIGFDGTPIGQMIRMKHLHEVADDPYGFGCEAWNNVDGTE 255          
BLAST of Gvermi12364.t1 vs. uniprot
Match: R7QS28_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QS28_CHOCR)

HSP 1 Score: 278 bits (712), Expect = 2.080e-84
Identity = 148/279 (53.05%), Postives = 196/279 (70.25%), Query Frame = 0
Query:  171 DSDIAHACDAVKRAVENEDPDDDELKESMRTLVSQSRDXXXXXXXXPDNILEREREVAREADYQVTSRGIGNVGDFFKIVMRPMETFIFGRLMKRGQRVGEVMGSVIGKIMRAS-ETRMKVCLMANSLGAHVLVGLLNRPHTLPYKLHTVFFVQGAIAQEYFEDGGRFGHVKEFVAGPVVVSHSEHDRMLRNVFGWFHGIAIGYSGTPAGASCRMKALSEIDEDPYSFECGEWNNIDGSEFINEGNPVAGGHGDFKEDETTSLYWSAIKTEVDDSAYDI 448
            ++DIA A  A K+A+E+++PDD++L   ++ L   SR+  XXXXXX  +   + R +  EA  Q T    G + +  KI++ P + F FGR M RGQR G+VM  V+GK+M A+ + + KVCLMANSLGAHVL  +LN+P TLP+K+HTVFFVQGAI +E F D  +F  +   VAGP++ +HSE D ML+NVFG F G AIG SG   G S  MK L +  E+PY F CGEW +++G++FI+EGN +AGGHGDFKEDETTS YW+AI TEV+DS YDI
Sbjct:  142 ETDIAKAALAAKKAIEDDNPDDEDLANQLKILADDSRNDSXXXXXXXCDA--KVRRLKEEAVVQKTGF-FGAMSNVAKIILNPFQHFAFGRFMARGQRTGKVMEKVLGKLMVANGDVKTKVCLMANSLGAHVLASILNKPQTLPHKIHTVFFVQGAITREVFADTKKFCAITNNVAGPIICTHSERDLMLKNVFGMFFGSAIGLSGVERGHSILMKGLRQAGEEPYRFACGEWTSVNGTQFIDEGNAIAGGHGDFKEDETTSCYWAAICTEVEDSCYDI 417          
BLAST of Gvermi12364.t1 vs. uniprot
Match: R7QSG2_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QSG2_CHOCR)

HSP 1 Score: 218 bits (555), Expect = 4.800e-66
Identity = 99/164 (60.37%), Postives = 127/164 (77.44%), Query Frame = 0
Query:  285 ETRMKVCLMANSLGAHVLVGLLNRPHTLPYKLHTVFFVQGAIAQEYFEDGGRFGHVKEFVAGPVVVSHSEHDRMLRNVFGWFHGIAIGYSGTPAGASCRMKALSEIDEDPYSFECGEWNNIDGSEFINEGNPVAGGHGDFKEDETTSLYWSAIKTEVDDSAYDI 448
            + + KVCLMANSLGAHVL G+LN+P TLP+K+HTVFFVQGAI +E F D  +F  +   VAGP++ +HSE D +L+N+FG F+G AIG SG   G S  MK L +  E+PY F CGEW +++G++FI+EGN +AGGHGDFKEDETTS YW+AI TEV+DS YD+
Sbjct:    6 DVKTKVCLMANSLGAHVLAGILNKPQTLPHKIHTVFFVQGAITREVFADTKKFCAINNNVAGPIICTHSERDLLLKNMFGVFYGSAIGLSGVERGHSILMKGLRQAGEEPYRFACGEWTSVNGTQFIDEGNAIAGGHGDFKEDETTSCYWAAICTEVEDSCYDM 169          
BLAST of Gvermi12364.t1 vs. uniprot
Match: A0A2V3IZR0_9FLOR (Uncharacterized protein n=3 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IZR0_9FLOR)

HSP 1 Score: 180 bits (457), Expect = 8.510e-51
Identity = 99/157 (63.06%), Postives = 124/157 (78.98%), Query Frame = 0
Query:  194 ELKESMRTLVSQSRDXXXXXXXXPDNILEREREVAREADYQ--VTSRGIGNVGDFFKIVMRPMETFIFGRLMKRGQRVGEVMGSVIGKIMRASETRMKVCLMANSLGAHVLVGLLNRPHTLPYKLHTVFFVQGAIAQEYFEDGGRFGHVKEFVAGPV 348
            +LK++MR  V +S D XXXXXXXPD ++ERE EVAR+   Q  V +RG+ N+   F  VMRP ETF+FGR MKRGQ V +VMGSV+GK+M+A+E R KVC++ANSL AHVL GLLNRPH LPYK+HTVFFVQGAIA+++F  G ++GHV E VAGP+
Sbjct:   33 DLKQAMRMSVVESCDDXXXXXXXPDTVVEREHEVARQKGSQEEVENRGLNNI---FTTVMRPFETFVFGRHMKRGQTVCQVMGSVLGKLMKATEYRKKVCVLANSLDAHVLCGLLNRPHQLPYKIHTVFFVQGAIAKDWFHPGAKYGHVHEVVAGPL 186          
BLAST of Gvermi12364.t1 vs. uniprot
Match: UPI001687C623 (hypothetical protein n=1 Tax=Leptolyngbya sp. FACHB-321 TaxID=2692807 RepID=UPI001687C623)

HSP 1 Score: 84.3 bits (207), Expect = 6.090e-14
Identity = 103/441 (23.36%), Postives = 181/441 (41.04%), Query Frame = 0
Query:   50 MPGDNAKYPYFLVQLAEREEREYEGQLVSDAIAEYIRTHRVTHIFAQTHGWNTPPDKAVAVPFTEFMGGMQDDRA----MPESSDDFQPIFIAFIWPAVPV--DFIKTDDALTKAELLASNERELEGDSDIAHACDAVKRAVEN--EDPDDDELKESM---RTLVSQSRDXXXXXXXX----------PDNILEREREVAREADYQVTSRGIGNVGDFF-KIVMRPMETFIFGRLMKRGQRVGEVMG-SVIGKIMRASETRMKVCLMANSLGAHVLVGLLNRPHT---LPYKLHTVFFVQGAIAQ-EYFEDGGRF-GHVKEF--------VAGPVVVSHSEHDRMLRNVFGWFHGIAI---GYSGTPA------------GASCRMKALSEIDEDPYSFECGEWNNIDGSEFINEGNPVAG---GHGDFKEDETTSLYWSA 436
            +P  + +Y         +E  E +G  +S  + E +    +T +F  +HGW      A    +  ++  M  + A    + +    F+P+ I   WP++P   + I+        EL+ S+  E   DS  A   +A+K       +D + DEL E+      ++ Q  D                  P++I E E E+  E        G+ N G F    V  P+    + ++    ++ GE  G   + ++ +A+  +++  L+ +S G  V+   L  P     LP  ++++  +QGA++   Y  D  +  GH   F        VAGP+VV+ SEHD  +  ++    G+A+    + G P             G       +   D++ YSFE G+  N++ S +I +    AG    HG+F E E     W A
Sbjct:    6 VPDTSLRYYLINFDALGQERNEPDGTKLSQTVLEVLAQEPITDVFIFSHGWQGDIP-AARNQYNRWIKAMAANTADIERIKQLRPGFKPLLIGLHWPSLPWGDESIEATTEEAAIELMVSHYAEHVADSQPAQ--EALKTIFSEALDDMEXDELSEATVEAYKVLDQETDLGSEGLVAAPGDDREPFNPESIYE-ESELETEIIGDSADFGLLNGGGFILSRVFSPLRALSYWKMKALARKFGESTGFEFLTRLQQATSEQVRFHLVGHSFGCIVMSATLAGPKAQGVLPRPVNSLCLIQGAVSMWTYCADIPKERGHAGYFYPVIRDGKVAGPIVVTLSEHDTAVGKLYPLASGLAMKTAAFDGFPKYGAIGAFGIQGDGIPLNPMKMLPCDQE-YSFEAGQIYNLESSRYIWKKPKEAGLGGAHGEFDEPEVAHAVWVA 441          
BLAST of Gvermi12364.t1 vs. uniprot
Match: A0A2V3ITW5_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ITW5_9FLOR)

HSP 1 Score: 57.8 bits (138), Expect = 6.040e-7
Identity = 36/68 (52.94%), Postives = 48/68 (70.59%), Query Frame = 0
Query:  194 ELKESMRTLVSQSRDXXXXXXXXPDNILEREREVAREADYQ--VTSRGIGNVGDFFKIVMRPMETFIF 259
            +LK++MR LV +S D   XXXXXPD ++ERE EVAR+ + Q  V +RG+ N+   F  VMRP ETF+F
Sbjct:   33 DLKQAMRMLVVESFDDNKXXXXXPDTVVEREHEVARQKESQEEVENRGLNNI---FTTVMRPFETFVF 97          
BLAST of Gvermi12364.t1 vs. uniprot
Match: A0A543BA42_9MICO (Uncharacterized protein n=1 Tax=Microbacterium saperdae TaxID=69368 RepID=A0A543BA42_9MICO)

HSP 1 Score: 60.5 bits (145), Expect = 3.100e-6
Identity = 99/411 (24.09%), Postives = 166/411 (40.39%), Query Frame = 0
Query:   72 YEGQLVSDAIAEYI--RTHRVTHIFAQTHGWNTPPDKAVAVPFTEFMGGM--QDDRAMPESSDDFQPIFIAFIWPAVPVDFIKTDDALTKAELLASNERELEGD-----SDIAHACDAVKRA--VENEDP----DDDELKESMRTLVSQSRDXXXXXXXXPD-------------NILERERE-----VAREADYQVTSRGIGNVGDFFKIVMRPMETFIFGRLMKRGQRVGEVMGSVIGKIM-RASETRMKVCLMANSLGAHVLVGLLNRPHTLPYKLHTVFFVQGAI-----AQEYFEDG--GRFGHVKEFVAGPVVVSHSEHDRMLRNVF---------GWFHGIAIGYSGT--------PAG-ASCRMKALSEIDEDPYSFECGEWNNIDGSEFINEGNPVAGGHGD 423
            ++G L+S   A     R    T ++  +HGWN     A    +T+F+ G   Q +       DD++P+ I  IWP+    F+K  +        A +E   EG       ++  +  A  RA  +E  D     D+D+ +++   +    +D        PD             N+   E +     +  +A      R +   G F      P        + K   R G V    +G ++ +  E+  ++ L+ +S GA VL+  + R   L   +H++  +Q A+     A++  E G  G + +V E V  P++++ SEHD  L  VF         G F+  AIG + T        P+G A     AL+  +    +   GE   ++GS  I +G    GGHGD
Sbjct:   24 HDGSLLSKQTAAMAVERARTATDVYVFSHGWNNVFADAKR-EYTDFIQGYIAQREEFGITVPDDYRPVLIGIIWPSTW--FVKQSEEGPAIAATAESEGMAEGSVEALLDEVGDSLPAENRAALIELLDGVELLDEDDARQAAGLVSGLWKDRDETSMAPPDLNQILMAWAALDGNVEPYEDDGIAGVIVEDAPDAEAERFVIAGGGF-----DPRTILRLASVWKIKSRAGLVGRHGVGPVLAQLLESSARLHLIGHSYGARVLLSAIARTK-LRRSVHSLLLLQPAVNRWCFAKKVGETGKKGGYANVPERVERPIMLTFSEHDFPLHEVFHLFVRGDNLGEFNAAAIGDTDTYGALGGYGPSGIAFTAPNALAPGERHELT---GEIVAVNGSVLI-DGEKAIGGHGD 421          
The following BLAST results are available for this feature:
BLAST of Gvermi12364.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
A0A2V3IEW4_9FLOR5.450e-9259.48Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QS28_CHOCR2.080e-8453.05Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
R7QSG2_CHOCR4.800e-6660.37Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A2V3IZR0_9FLOR8.510e-5163.06Uncharacterized protein n=3 Tax=Gracilariopsis cho... [more]
UPI001687C6236.090e-1423.36hypothetical protein n=1 Tax=Leptolyngbya sp. FACH... [more]
A0A2V3ITW5_9FLOR6.040e-752.94Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A543BA42_9MICO3.100e-624.09Uncharacterized protein n=1 Tax=Microbacterium sap... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 183..220
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..33
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 183..207

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_3404contigScGOVlb_3404:4369380..4370985 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi12364.t1Gvermi12364.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_3404 4369380..4370985 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi12364.t1 ID=Gvermi12364.t1|Name=Gvermi12364.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=449bp
MGGTQSGEEVSEVVYDGDQAPEQPQEEEDTVHYEEMSEDMKALLDANTYM
PGDNAKYPYFLVQLAEREEREYEGQLVSDAIAEYIRTHRVTHIFAQTHGW
NTPPDKAVAVPFTEFMGGMQDDRAMPESSDDFQPIFIAFIWPAVPVDFIK
TDDALTKAELLASNERELEGDSDIAHACDAVKRAVENEDPDDDELKESMR
TLVSQSRDDDDDDDDDPDNILEREREVAREADYQVTSRGIGNVGDFFKIV
MRPMETFIFGRLMKRGQRVGEVMGSVIGKIMRASETRMKVCLMANSLGAH
VLVGLLNRPHTLPYKLHTVFFVQGAIAQEYFEDGGRFGHVKEFVAGPVVV
SHSEHDRMLRNVFGWFHGIAIGYSGTPAGASCRMKALSEIDEDPYSFECG
EWNNIDGSEFINEGNPVAGGHGDFKEDETTSLYWSAIKTEVDDSAYDI*
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