Gvermi12357.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi12357.t1
Unique NameGvermi12357.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length189
Homology
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BLAST of Gvermi12357.t1 vs. uniprot
Match: A0A2V3IIW0_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IIW0_9FLOR)

HSP 1 Score: 106 bits (264), Expect = 4.020e-25
Identity = 86/183 (46.99%), Postives = 119/183 (65.03%), Query Frame = 0 
Query:    1 LAQNKGLVNGICQECAPGSYGFGINALAEHSCVQCPAGTFRDVANDVNIASCDPSSNEDCPEPLPCKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLREGAGSEPVSFTGPFGAIIEEEDPEETSTQPLPVLDEIDDILTSAEPEESQVPEIDLPTTDEAIAFSDEPVSSTGERPLESS 183
            LAQNKG+V+G C++C PGSYG   +   +++CVQ  AG+FR++ ND+ +A+C  S    CP+ +PC+          XXXXXXXXXXXXXXXXXXXXXXXLREG  SEPV F  P G + ++ D  E S+QP+P LDE +D+ +S EP ES +P+  +        FS+E  S++    + S+
Sbjct:   36 LAQNKGIVDGFCRQCPPGSYGKSGDVFQQNTCVQXXAGSFRNLENDILLAACAMSGEASCPKAVPCQTCPPNTVAREXXXXXXXXXXXXXXXXXXXXXXXLREGGASEPVLFNDPIGLVDDQFDEVEESSQPVPDLDE-NDMTSSTEPVESPLPQSIVEIEKSLPDFSEELPSASDPEQMMST 217
The following BLAST results are available for this feature:
BLAST of Gvermi12357.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IIW0_9FLOR4.020e-2546.99Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSMARTSM01411GCC2_GCC3_2coord: 6..52
e-value: 0.037
score: 23.2
coord: 66..100
e-value: 1.8
score: 14.8
NoneNo IPR availableGENE3D2.10.50.10Tumor Necrosis Factor Receptor, subunit A, domain 2coord: 22..100
e-value: 1.0E-8
score: 37.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 144..188
IPR009030Growth factor receptor cysteine-rich domain superfamilySUPERFAMILY57184Growth factor receptor domaincoord: 9..101

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_3404contigScGOVlb_3404:4332039..4332605 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi12357.t1Gvermi12357.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_3404 4332039..4332605 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi12357.t1 ID=Gvermi12357.t1|Name=Gvermi12357.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=189bp
LAQNKGLVNGICQECAPGSYGFGINALAEHSCVQCPAGTFRDVANDVNIA
SCDPSSNEDCPEPLPCKKCPPNSVTRAPGATQCQPCPQGTFSYGLGETEC
LREGAGSEPVSFTGPFGAIIEEEDPEETSTQPLPVLDEIDDILTSAEPEE
SQVPEIDLPTTDEAIAFSDEPVSSTGERPLESSALFLE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009030Growth_fac_rcpt_cys_sf