Gvermi12354.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi12354.t1
Unique NameGvermi12354.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length145
Homology
BLAST of Gvermi12354.t1 vs. uniprot
Match: A0A2V3IIS8_9FLOR (30S ribosomal protein S7 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IIS8_9FLOR)

HSP 1 Score: 235 bits (600), Expect = 1.100e-77
Identity = 115/144 (79.86%), Postives = 132/144 (91.67%), Query Frame = 0
Query:    1 MSLHLSDPIVHKLVRVIMKDGKKHSALRIVDEAFHILRTQQDVNSPVSLLHRAVANAAPVVETRRYKVGGRALQVPLPCAPKRSQSLAMRFIRDAFRERKEHGGGLRLANELAALDKRQGGAFARREELHKRAETNRAFAHYAR 144
            MSLHLSDPIVHKLVR+IMK GKKH+AL+IVD+AFHILR++ +V SP++L HRAVANAAPVVETR YK  GR + VPLPC PKRSQSLAMRFIRDAFRERKE+GGGL+LANEL AL+KRQGGA++RREE+HKRAE NRAFAH+AR
Sbjct:    1 MSLHLSDPIVHKLVRMIMKHGKKHAALKIVDDAFHILRSKHNVGSPIALFHRAVANAAPVVETRGYKASGRTVHVPLPCGPKRSQSLAMRFIRDAFRERKENGGGLKLANELFALEKRQGGAYSRREEMHKRAEANRAFAHFAR 144          
BLAST of Gvermi12354.t1 vs. uniprot
Match: M1VCX2_CYAM1 (Mitochondrial ribosomal protein S7 n=1 Tax=Cyanidioschyzon merolae (strain 10D) TaxID=280699 RepID=M1VCX2_CYAM1)

HSP 1 Score: 136 bits (342), Expect = 1.980e-38
Identity = 72/142 (50.70%), Postives = 96/142 (67.61%), Query Frame = 0
Query:    1 MSLHLSDPIVHKLVRVIMKDGKKHSALRIVDEAFHILRTQQDVNSPVSLLHRAVANAAPVVETRRYKVGGRALQVPLPCAPKRSQSLAMRFIRDAFR-ERKEHGGGLRLANELAALDKRQGGAFARREELHKRAETNRAFAH 141
            MSL+ +D ++ KLV ++M+DGKK +A RIVDEAF IL+ +  V  P S    A+  A PVVE  RY++ GR LQVP P  P R+ +LA+R IRDA R ER+E G   RLA EL  + ++QG A+ RR++LHK AE N+ F H
Sbjct:    1 MSLYTADSVLSKLVNILMRDGKKSTAQRIVDEAFWILKREYQVPDPASYAKEAIEQAKPVVELTRYRLSGRNLQVPSPLMPHRATALALRAIRDAVRSERRERGAAARLAAELVDIHRQQGVAWKRRQDLHKMAEANKMFTH 142          
BLAST of Gvermi12354.t1 vs. uniprot
Match: A0A7S0T3W4_9RHOD (Hypothetical protein n=1 Tax=Erythrolobus madagascarensis TaxID=708628 RepID=A0A7S0T3W4_9RHOD)

HSP 1 Score: 136 bits (343), Expect = 2.070e-38
Identity = 68/139 (48.92%), Postives = 95/139 (68.35%), Query Frame = 0
Query:    1 MSLHLSDPIVHKLVRVIMKDGKKHSALRIVDEAFHILRTQQDVNSPVSLLHRAVANAAPVVETRRYKVGGRALQVPLPCAPKRSQSLAMRFIRDAFRERKEHGGGLRLANELAALDKRQGGAFARREELHKRAETNRAF 139
            MS H  D +V ++VR+ M+ GKK ++ +I+D A  IL+   ++  P+ +L+ AV NA P+VETR     GR + +P P +P+R +SLA+RFIRDA RER E+G  LRLANE+  L K+QGGA  RR+  H+ AE NRAF
Sbjct:   17 MSFHARDAMVSRMVRIFMRHGKKTTSQKIIDGAMGILKRDHNIQDPLKMLYEAVQNAKPLVETRPVINAGRKVLIPRPVSPERQESLALRFIRDAMRERNENGSPLRLANEILELHKKQGGARRRRDNQHRTAEANRAF 155          
BLAST of Gvermi12354.t1 vs. uniprot
Match: A0A1X6P3Z7_PORUM (Ribosomal_S7 domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P3Z7_PORUM)

HSP 1 Score: 135 bits (341), Expect = 2.900e-38
Identity = 64/142 (45.07%), Postives = 99/142 (69.72%), Query Frame = 0
Query:    1 MSLHLSDPIVHKLVRVIMKDGKKHSALRIVDEAFHILRTQQDVNSPVSLLHRAVANAAPVVETRRYKVGGRALQVPLPCAPKRSQSLAMRFIRDAFRERKEHGGGLRLANELAALDKRQGGAFARREELHKRAETNRAFAHY 142
            MSL + DP++ ++  + M+ G+K  ++ +++EA   LR +  V  PV  +  AV NA P+VET ++K GGRA+Q+P+PC P R++SLA+R +RD+FR RKEHG GLRLA EL  L K+ G    RR+++H+ AE N+A+ ++
Sbjct:    1 MSLLMRDPMMARMACMFMRHGEKTKSMALIEEAVVELRRRHGVERPVEFIRSAVENAKPLVETVKWKAGGRAIQMPVPCRPARAESLALRMLRDSFRLRKEHGAGLRLAAELVDLSKKTGRTRGRRDDMHRAAEANKAYVYF 142          
BLAST of Gvermi12354.t1 vs. uniprot
Match: A0A7S0ZCK2_9RHOD (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZCK2_9RHOD)

HSP 1 Score: 130 bits (326), Expect = 4.840e-36
Identity = 65/137 (47.45%), Postives = 91/137 (66.42%), Query Frame = 0
Query:    1 MSLHLSDPIVHKLVRVIMKDGKKHSALRIVDEAFHILRTQQDVNSPVSLLHRAVANAAPVVETRRYKVGGRALQVPLPCAPKRSQSLAMRFIRDAFRERKEHGGGLRLANELAALDKRQGGAFARREELHKRAETNR 137
            MS    DP++ +LVR++M DGKK ++++IVD A  IL+ +  +  PV  ++ AV  A P++E     V GR + VP P  PKR + LA+R+IRDA R RKEHG  LRLANEL  L  +QGGA  +R++ H+ AE+NR
Sbjct:    1 MSFLQKDPLISRLVRILMWDGKKITSMKIVDGALMILKREHKIQDPVQFVYHAVEQAKPLIENFSMVVAGRRVPVPRPVYPKRQEGLALRYIRDAMRARKEHGSALRLANELLDLSNKQGGARKKRDDQHRIAESNR 137          
BLAST of Gvermi12354.t1 vs. uniprot
Match: M2XY53_GALSU (30S ribosomal protein S7 (Plastid) isoform 1 n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XY53_GALSU)

HSP 1 Score: 126 bits (317), Expect = 1.300e-34
Identity = 64/141 (45.39%), Postives = 95/141 (67.38%), Query Frame = 0
Query:    2 SLHLSDPIVHKLVRVIMKDGKKHSALRIVDEAFHILRTQQDVNSPVSLLHRAVANAAPVVETRRYKVGGRALQVPLPCAPKRSQSLAMRFIRDAFRERKEHGGGLRLANELAALDKRQGGAFARREELHKRAETNRAFAHY 142
            SL+ SD ++ K+V + M+DG+K  +L+++DEAF  L+ +  V  P+SL+HRAV  A P+V    +   G+ + VP+P  P++    A+RFI+ A  +RKEH G +RLANEL  L K  GGA  RR++LH+ AE NRA+AH+
Sbjct:    3 SLYKSDVVIGKMVNIFMRDGEKGVSLKLIDEAFRELKVKHGVKDPLSLVHRAVDIAKPLVALIPHYPHGKKVAVPIPLKPEQQLGKALRFIKQAVADRKEHYGHVRLANELLELSKGAGGAKKRRDDLHRLAEQNRAYAHF 143          
BLAST of Gvermi12354.t1 vs. uniprot
Match: H5SGQ8_9BACT (30S ribosomal protein S7 n=5 Tax=Bacteria TaxID=2 RepID=H5SGQ8_9BACT)

HSP 1 Score: 117 bits (293), Expect = 7.220e-31
Identity = 63/136 (46.32%), Postives = 87/136 (63.97%), Query Frame = 0
Query:    7 DPIVHKLVRVIMKDGKKHSALRIVDEAFHILRTQQDVNSPVSLLHRAVANAAPVVETRRYKVGGRALQVPLPCAPKRSQSLAMRFIRDAFRERKEHGGGLRLANELAALDKRQGGAFARREELHKRAETNRAFAHY 142
            D +V K + VIM+DGKK  A RIV EAF I+R ++    P+   H+A+ N APVVE R  ++GG   Q+P+     R  +LAMR+I+   RER++    L+LA EL A    +GGA  +R+E+H+ AE NRAFAHY
Sbjct:   19 DVMVAKFINVIMRDGKKSIARRIVYEAFDIIR-ERTKKDPLETFHKAITNVAPVVEVRSRRIGGANYQIPMEVREDRRIALAMRWIKQYARERRDKSMALKLAAELIAAANGEGGAIRKRDEVHRMAEANRAFAHY 153          
BLAST of Gvermi12354.t1 vs. uniprot
Match: F0S1B6_DESTD (30S ribosomal protein S7 n=9 Tax=Desulfurobacteriaceae TaxID=558314 RepID=F0S1B6_DESTD)

HSP 1 Score: 113 bits (282), Expect = 3.410e-29
Identity = 61/136 (44.85%), Postives = 86/136 (63.24%), Query Frame = 0
Query:    7 DPIVHKLVRVIMKDGKKHSALRIVDEAFHILRTQQDVNSPVSLLHRAVANAAPVVETRRYKVGGRALQVPLPCAPKRSQSLAMRFIRDAFRERKEHGGGLRLANELAALDKRQGGAFARREELHKRAETNRAFAHY 142
            D +V KL+  +MKDGKK  A +IV  AF I++ +     P+++ H+AV N  P++E R  +VGG   QVP+   P+R   LA+++I DA R R E G   +LANEL      +GGAF ++E+ HK AE N+AFAHY
Sbjct:   20 DKLVAKLINKVMKDGKKSKAEKIVYGAFDIIKEKLG-EDPLAVFHKAVENVKPIMEVRPRRVGGATYQVPMEVRPERQIHLALKWIVDAARARSERGMVNKLANELIDAYNERGGAFKKKEDTHKMAEANKAFAHY 154          
BLAST of Gvermi12354.t1 vs. uniprot
Match: A0A7V5S8M3_9BACT (30S ribosomal protein S7 n=1 Tax=Candidatus Fraserbacteria bacterium TaxID=2268184 RepID=A0A7V5S8M3_9BACT)

HSP 1 Score: 110 bits (275), Expect = 4.220e-28
Identity = 62/141 (43.97%), Postives = 85/141 (60.28%), Query Frame = 0
Query:    2 SLHLSDPIVHKLVRVIMKDGKKHSALRIVDEAFHILRTQQDVNSPVSLLHRAVANAAPVVETRRYKVGGRALQVPLPCAPKRSQSLAMRFIRDAFRERKEHGGGLRLANELAALDKRQGGAFARREELHKRAETNRAFAHY 142
             +    PIV KL+  +M++GKK  A RIV  AF I++ +   N P+ +  +A+AN  P +ETR  +VGG A QVP      R ++LA+R+I +A RER EH    RLA E+    K QG A  ++ E H+ AE NRAFAHY
Sbjct:   18 DIRYGSPIVEKLINYVMREGKKSLARRIVYRAFDIIQEKTGEN-PLEVFFKAMANCMPKLETRSRRVGGAAYQVPYEVEEDRQRTLALRWIVNAARERGEHSMAERLAAEILDASKGQGQAVEKKNETHRMAEANRAFAHY 157          
BLAST of Gvermi12354.t1 vs. uniprot
Match: A0A1G2P827_9BACT (30S ribosomal protein S7 n=2 Tax=Candidatus Taylorbacteria TaxID=1817919 RepID=A0A1G2P827_9BACT)

HSP 1 Score: 110 bits (274), Expect = 5.500e-28
Identity = 57/134 (42.54%), Postives = 85/134 (63.43%), Query Frame = 0
Query:   10 VHKLVRVIMKDGKKHSALRIVDEAFHILRTQQDVNSPVSLLHRAVANAAPVVETRRYKVGGRALQVPLPCAPKRSQSLAMRFIRDAFRERKEHGGGLRLANELAALDKRQGGAFARREELHKRAETNRAFAHYA 143
            V KL   IMK GKK ++ ++V+ AF I++ +   ++P+ +   A+ N APV+E R  +VGG   QVP+   P+R QSL++R+I DA R +K      +LA+E+ A  K +G A  +RE  HK AE N+AFAH+A
Sbjct:   22 VEKLTNYIMKQGKKSTSRKVVNAAFEIIKQKAKTDNPLEIFETALKNTAPVMEVRSRRVGGANYQVPVEVRPERRQSLSLRWIIDAARSKKGKPMSEKLADEIIAASKNEGDAAKKRENTHKMAEANKAFAHFA 155          
The following BLAST results are available for this feature:
BLAST of Gvermi12354.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IIS8_9FLOR1.100e-7779.8630S ribosomal protein S7 n=1 Tax=Gracilariopsis ch... [more]
M1VCX2_CYAM11.980e-3850.70Mitochondrial ribosomal protein S7 n=1 Tax=Cyanidi... [more]
A0A7S0T3W4_9RHOD2.070e-3848.92Hypothetical protein n=1 Tax=Erythrolobus madagasc... [more]
A0A1X6P3Z7_PORUM2.900e-3845.07Ribosomal_S7 domain-containing protein n=1 Tax=Por... [more]
A0A7S0ZCK2_9RHOD4.840e-3647.45Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]
M2XY53_GALSU1.300e-3445.3930S ribosomal protein S7 (Plastid) isoform 1 n=1 T... [more]
H5SGQ8_9BACT7.220e-3146.3230S ribosomal protein S7 n=5 Tax=Bacteria TaxID=2 ... [more]
F0S1B6_DESTD3.410e-2944.8530S ribosomal protein S7 n=9 Tax=Desulfurobacteria... [more]
A0A7V5S8M3_9BACT4.220e-2843.9730S ribosomal protein S7 n=1 Tax=Candidatus Fraser... [more]
A0A1G2P827_9BACT5.500e-2842.5430S ribosomal protein S7 n=2 Tax=Candidatus Taylor... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR023798Ribosomal protein S7 domainPFAMPF00177Ribosomal_S7coord: 6..137
e-value: 1.2E-39
score: 135.3
IPR000235Ribosomal protein S5/S7PIRSFPIRSF002122RPS7p_RPS7a_RPS5e_RPS7ocoord: 3..144
e-value: 7.6E-41
score: 137.8
IPR000235Ribosomal protein S5/S7PANTHERPTHR11205RIBOSOMAL PROTEIN S7coord: 5..144
IPR036823Ribosomal protein S7 domain superfamilyGENE3D1.10.455.10Ribosomal protein S7 domaincoord: 2..143
e-value: 1.3E-42
score: 147.0
IPR036823Ribosomal protein S7 domain superfamilySUPERFAMILY47973Ribosomal protein S7coord: 5..140
NoneNo IPR availablePANTHERPTHR11205:SF1928S RIBOSOMAL PROTEIN S7, MITOCHONDRIALcoord: 5..144
IPR020606Ribosomal protein S7, conserved sitePROSITEPS00052RIBOSOMAL_S7coord: 7..33

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_3404contigScGOVlb_3404:4317381..4317879 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi12354.t1Gvermi12354.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_3404 4317381..4317879 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi12354.t1 ID=Gvermi12354.t1|Name=Gvermi12354.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=145bp
MSLHLSDPIVHKLVRVIMKDGKKHSALRIVDEAFHILRTQQDVNSPVSLL
HRAVANAAPVVETRRYKVGGRALQVPLPCAPKRSQSLAMRFIRDAFRERK
EHGGGLRLANELAALDKRQGGAFARREELHKRAETNRAFAHYAR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR023798Ribosomal_S7_dom
IPR000235Ribosomal_S5/S7
IPR036823Ribosomal_S7_dom_sf
IPR020606Ribosomal_S7_CS