Gvermi12349.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi12349.t1
Unique NameGvermi12349.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length119
Homology
BLAST of Gvermi12349.t1 vs. uniprot
Match: A0A2V3IIU2_9FLOR (60S ribosomal protein L31 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IIU2_9FLOR)

HSP 1 Score: 228 bits (581), Expect = 1.270e-75
Identity = 111/118 (94.07%), Postives = 116/118 (98.31%), Query Frame = 0
Query:    1 MAKDRKPRGSEVVTRDYTIHLHKRLYRYGFKRKAPRAIKVIREFATRTMGTTDVRVDPKLNKEVWRTGVRNVPYRIRVRLSRKRNDDEDAKEPLYTLASFVPVSNPHCKGLQTTTIEE 118
            MAKDRKPRGSEVVTRDYTIHLHK+LY+YGFKRKAPRAIKVIR+FA RTMGT+DVRVDPKLNKEVWRTGVRNVPYRIRVRL+RKRNDDEDAKEPLYTLASFVPVSNP CKGLQTTTIEE
Sbjct:    1 MAKDRKPRGSEVVTRDYTIHLHKKLYKYGFKRKAPRAIKVIRDFARRTMGTSDVRVDPKLNKEVWRTGVRNVPYRIRVRLARKRNDDEDAKEPLYTLASFVPVSNPRCKGLQTTTIEE 118          
BLAST of Gvermi12349.t1 vs. uniprot
Match: R7QUX6_CHOCR (60S ribosomal protein L31 n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QUX6_CHOCR)

HSP 1 Score: 199 bits (505), Expect = 4.650e-64
Identity = 98/118 (83.05%), Postives = 110/118 (93.22%), Query Frame = 0
Query:    1 MAKDRKPRGSEVVTRDYTIHLHKRLYRYGFKRKAPRAIKVIREFATRTMGTTDVRVDPKLNKEVWRTGVRNVPYRIRVRLSRKRNDDEDAKEPLYTLASFVPVSNPHCKGLQTTTIEE 118
            MAKDRKP+GSEVVTRDYTIHLH +L +YGFKRKAPRA+KVIR+FAT+TMGT+DVRVD +LNKE+W+TGVRNVPYRIRVRLSRKRNDDEDAKEPLYTLAS+VPV+    KGLQT TIEE
Sbjct:    1 MAKDRKPKGSEVVTRDYTIHLHPKLRKYGFKRKAPRAVKVIRDFATKTMGTSDVRVDTRLNKEIWKTGVRNVPYRIRVRLSRKRNDDEDAKEPLYTLASYVPVTT--FKGLQTVTIEE 116          
BLAST of Gvermi12349.t1 vs. uniprot
Match: A0A7S1XAX7_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1XAX7_9RHOD)

HSP 1 Score: 169 bits (429), Expect = 1.790e-52
Identity = 82/118 (69.49%), Postives = 101/118 (85.59%), Query Frame = 0
Query:    1 MAKDRKPRGSEVVTRDYTIHLHKRLYRYGFKRKAPRAIKVIREFATRTMGTTDVRVDPKLNKEVWRTGVRNVPYRIRVRLSRKRNDDEDAKEPLYTLASFVPVSNPHCKGLQTTTIEE 118
            MAKDRK +G+EVVTRDYTIHLH+R++  GFKR+APRAIK IR+FA + MGT+DVR+D  LNKE+W+ G+RNV YR+RVRLSR+RNDDEDAKEPLYT  + VPVS+   KGLQT T+E+
Sbjct:    1 MAKDRKVKGAEVVTRDYTIHLHRRIHGIGFKRRAPRAIKEIRKFACKMMGTSDVRIDQALNKEIWKQGIRNVQYRVRVRLSRRRNDDEDAKEPLYTYVTLVPVSS--FKGLQTQTVED 116          
BLAST of Gvermi12349.t1 vs. uniprot
Match: A0A6T6B2F8_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A6T6B2F8_9RHOD)

HSP 1 Score: 167 bits (424), Expect = 8.220e-51
Identity = 81/117 (69.23%), Postives = 100/117 (85.47%), Query Frame = 0
Query:    2 AKDRKPRGSEVVTRDYTIHLHKRLYRYGFKRKAPRAIKVIREFATRTMGTTDVRVDPKLNKEVWRTGVRNVPYRIRVRLSRKRNDDEDAKEPLYTLASFVPVSNPHCKGLQTTTIEE 118
            AKDRK +G+EVVTRDYTIHLH+R++  GFKR+APRAIK IR+FA + MGT+DVR+D  LNKE+W+ G+RNV YR+RVRLSR+RNDDEDAKEPLYT  + VPVS+   KGLQT T+E+
Sbjct:   68 AKDRKVKGAEVVTRDYTIHLHRRIHGIGFKRRAPRAIKEIRKFACKMMGTSDVRIDQALNKEIWKQGIRNVQYRVRVRLSRRRNDDEDAKEPLYTYVTLVPVSS--FKGLQTQTVED 182          
BLAST of Gvermi12349.t1 vs. uniprot
Match: A0A1X6P8Y1_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P8Y1_PORUM)

HSP 1 Score: 157 bits (396), Expect = 1.910e-47
Identity = 77/118 (65.25%), Postives = 96/118 (81.36%), Query Frame = 0
Query:    1 MAKDRKPRGSEVVTRDYTIHLHKRLYRYGFKRKAPRAIKVIREFATRTMGTTDVRVDPKLNKEVWRTGVRNVPYRIRVRLSRKRNDDEDAKEPLYTLASFVPVSNPHCKGLQTTTIEE 118
            M KDRKP+ ++VVTR+YTIHLHK ++   FK++AP+A+  +R+FA  TMGT DVR+D +LNKEVWR GVRNVP R+RVRLSR+RN+DEDAKEPLYTL + V V  P  KGLQT TI+E
Sbjct:    1 MVKDRKPKSADVVTREYTIHLHKHVHGKSFKKRAPKAVDAVRKFARTTMGTADVRLDTQLNKEVWRKGVRNVPRRLRVRLSRRRNEDEDAKEPLYTLVTAVKV--PTFKGLQTQTIDE 116          
BLAST of Gvermi12349.t1 vs. uniprot
Match: RL31_CYAPA (60S ribosomal protein L31 n=1 Tax=Cyanophora paradoxa TaxID=2762 RepID=RL31_CYAPA)

HSP 1 Score: 156 bits (395), Expect = 2.970e-47
Identity = 74/116 (63.79%), Postives = 100/116 (86.21%), Query Frame = 0
Query:    2 AKDRKPRGSEVVTRDYTIHLHKRLYRYGFKRKAPRAIKVIREFATRTMGTTDVRVDPKLNKEVWRTGVRNVPYRIRVRLSRKRNDDEDAKEPLYTLASFVPVSNPHCKGLQTTTIE 117
            A+++K R +E+VTR+YTI+LHKRL+  GFK++APRA+K I++FA++ MGTTDVRVDP+LNK VW  G+R+VPYR+RVRL+RKRNDDEDAKE LYTL ++VPV++   KGLQT  ++
Sbjct:    4 AENKKSRAAEIVTREYTINLHKRLHGVGFKKRAPRAVKEIKKFASKIMGTTDVRVDPRLNKFVWNQGIRSVPYRVRVRLARKRNDDEDAKEKLYTLVTYVPVTS--FKGLQTQNVD 117          
BLAST of Gvermi12349.t1 vs. uniprot
Match: A0A5J4YQ45_PORPP (60S ribosomal protein L31 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YQ45_PORPP)

HSP 1 Score: 152 bits (383), Expect = 1.820e-45
Identity = 79/118 (66.95%), Postives = 97/118 (82.20%), Query Frame = 0
Query:    1 MAK-DRKPRGSEVVTRDYTIHLHKRLYRYGFKRKAPRAIKVIREFATRTMGTTDVRVDPKLNKEVWRTGVRNVPYRIRVRLSRKRNDDEDAKEPLYTLASFVPVSNPHCKGLQTTTIE 117
            MAK ++K R  EVVTR+YT++LHKR++  GFK +APRAIK IREFA +TMGT+DVR+D  +NKEVW+TGVRNVPYRIR+RLSR+RNDD+DAKEPLYTL + V V+    KG QT  IE
Sbjct:    1 MAKGEKKIRTDEVVTREYTMNLHKRIHGTGFKHRAPRAIKKIREFAAKTMGTSDVRLDTSVNKEVWKTGVRNVPYRIRIRLSRRRNDDQDAKEPLYTLVTAVRVAT--FKGSQTIKIE 116          
BLAST of Gvermi12349.t1 vs. uniprot
Match: A0A6V1PKA7_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1PKA7_HETAK)

HSP 1 Score: 150 bits (379), Expect = 7.400e-45
Identity = 73/117 (62.39%), Postives = 96/117 (82.05%), Query Frame = 0
Query:    1 MAKDRKPRGSEVVTRDYTIHLHKRLYRYGFKRKAPRAIKVIREFATRTMGTTDVRVDPKLNKEVWRTGVRNVPYRIRVRLSRKRNDDEDAKEPLYTLASFVPVSNPHCKGLQTTTIE 117
            MAK+RK R ++VV+RDYTI+LHKRLY+  F++KAP+AI+ I+ FAT+ MGT+DVRVD KLNK +W  G++NVPYR+RVRLSRKRN+DEDAKE LYTL   + V++   KGLQT  ++
Sbjct:    1 MAKERKTRSADVVSRDYTINLHKRLYKTTFRKKAPKAIRQIKAFATKMMGTSDVRVDAKLNKFIWSKGIKNVPYRVRVRLSRKRNEDEDAKESLYTLVQHIEVAD--FKGLQTENVD 115          
BLAST of Gvermi12349.t1 vs. uniprot
Match: A0A0L0HC85_SPIPD (Uncharacterized protein n=2 Tax=Spizellomyces TaxID=4815 RepID=A0A0L0HC85_SPIPD)

HSP 1 Score: 149 bits (375), Expect = 3.400e-44
Identity = 74/116 (63.79%), Postives = 94/116 (81.03%), Query Frame = 0
Query:    3 KDRKPRGSEVVTRDYTIHLHKRLYRYGFKRKAPRAIKVIREFATRTMGTTDVRVDPKLNKEVWRTGVRNVPYRIRVRLSRKRNDDEDAKEPLYTLASFVPVSNPHCKGLQTTTIEE 118
            K +K   +EVVTR+YTIHLHK ++   FK++AP A+K IREFA +TMGT+DVR++P LNK VW  G+++VP+RIRVRLSR+RND EDAKE LYTL S+VPV+N   KGLQT T+EE
Sbjct:    7 KTKKSTLNEVVTREYTIHLHKHVFGKTFKKRAPTAVKAIREFAHKTMGTSDVRLEPSLNKAVWSRGIKSVPHRIRVRLSRRRNDAEDAKEKLYTLVSYVPVTN--FKGLQTQTVEE 120          
BLAST of Gvermi12349.t1 vs. uniprot
Match: A0A507EGZ6_9FUNG (Uncharacterized protein n=2 Tax=Powellomyces hirtus TaxID=109895 RepID=A0A507EGZ6_9FUNG)

HSP 1 Score: 148 bits (373), Expect = 7.520e-44
Identity = 72/109 (66.06%), Postives = 90/109 (82.57%), Query Frame = 0
Query:   10 SEVVTRDYTIHLHKRLYRYGFKRKAPRAIKVIREFATRTMGTTDVRVDPKLNKEVWRTGVRNVPYRIRVRLSRKRNDDEDAKEPLYTLASFVPVSNPHCKGLQTTTIEE 118
            +EVV+R+YTIHLHK ++   FK++AP A+K IREFAT+TMGT+DVR+DP LNK VW  G++ VP+RIRVRLSR+RND EDAKE LYT  +FVPV+N   KGLQTT +EE
Sbjct:   17 NEVVSREYTIHLHKHVFGRTFKKRAPTAVKAIREFATKTMGTSDVRLDPSLNKAVWARGIKAVPHRIRVRLSRRRNDAEDAKEKLYTFVTFVPVTN--FKGLQTTAVEE 123          
The following BLAST results are available for this feature:
BLAST of Gvermi12349.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IIU2_9FLOR1.270e-7594.0760S ribosomal protein L31 n=1 Tax=Gracilariopsis c... [more]
R7QUX6_CHOCR4.650e-6483.0560S ribosomal protein L31 n=1 Tax=Chondrus crispus... [more]
A0A7S1XAX7_9RHOD1.790e-5269.49Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A0A6T6B2F8_9RHOD8.220e-5169.23Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A0A1X6P8Y1_PORUM1.910e-4765.25Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
RL31_CYAPA2.970e-4763.7960S ribosomal protein L31 n=1 Tax=Cyanophora parad... [more]
A0A5J4YQ45_PORPP1.820e-4566.9560S ribosomal protein L31 n=1 Tax=Porphyridium pur... [more]
A0A6V1PKA7_HETAK7.400e-4562.39Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A0L0HC85_SPIPD3.400e-4463.79Uncharacterized protein n=2 Tax=Spizellomyces TaxI... [more]
A0A507EGZ6_9FUNG7.520e-4466.06Uncharacterized protein n=2 Tax=Powellomyces hirtu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000054Ribosomal protein L31eSMARTSM01380Ribosomal_L31e_2coord: 10..93
e-value: 5.2E-46
score: 168.9
IPR000054Ribosomal protein L31ePFAMPF01198Ribosomal_L31ecoord: 11..92
e-value: 2.0E-41
score: 140.1
IPR000054Ribosomal protein L31ePANTHERPTHR1095660S RIBOSOMAL PROTEIN L31coord: 5..118
IPR000054Ribosomal protein L31eCDDcd00463Ribosomal_L31ecoord: 10..92
e-value: 1.46062E-31
score: 104.959
IPR023621Ribosomal protein L31e domain superfamilyGENE3D3.10.440.10coord: 1..117
e-value: 3.8E-46
score: 157.8
IPR023621Ribosomal protein L31e domain superfamilySUPERFAMILY54575Ribosomal protein L31ecoord: 11..93

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_3404contigScGOVlb_3404:4302815..4303289 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi12349.t1Gvermi12349.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_3404 4302815..4303289 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi12349.t1 ID=Gvermi12349.t1|Name=Gvermi12349.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=119bp
MAKDRKPRGSEVVTRDYTIHLHKRLYRYGFKRKAPRAIKVIREFATRTMG
TTDVRVDPKLNKEVWRTGVRNVPYRIRVRLSRKRNDDEDAKEPLYTLASF
VPVSNPHCKGLQTTTIEE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000054Ribosomal_L31e
IPR023621Ribosomal_L31e_dom_sf