Gvermi12345.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi12345.t1
Unique NameGvermi12345.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length702
Homology
BLAST of Gvermi12345.t1 vs. uniprot
Match: A0A2V3J444_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J444_9FLOR)

HSP 1 Score: 484 bits (1246), Expect = 2.750e-159
Identity = 336/722 (46.54%), Postives = 430/722 (59.56%), Query Frame = 0
Query:    1 MHVRELAARFERPVPTQTTSSSNVVPVHQLSGSSVSELCERFEQTVIHQQKDVHRNDSIPIPNSDKLQLSSHPSAVSNEAPLLSAPTIATTPVTPLASQTADEISAILPVFDAPSHEDDQHHSAPI----SDAFPIANMQTALPPQKPIEETRDQVRAEQQHSELKQSQRIPSEFTEASSTHSQSTSSGSTVPPISDFVPQSIDDVGIIPDVSEGELDDIDGIERVEDYDSQDENQSSHTS----------SDNQNDTFQRAETLSDPHVSYRTEGGESLHIIDGSYSHXXXXXXXXXXXXXXXXXXXXXXXXIIFSDRASTLIRQDQSHQTYSGYSCSPDTAPMSSFHTSTIHSQVLFSRATT-YSASEEYKSTNNDFIPASKHGSPMVQNNSNARKTLQAEMNASSNPSSGFPLGASVPPAPSPPS---------SVLALEDSTSSVRPNHVLDEVASEPEAESEVYSQNRICPQGSIKRLPKAKVLIARKRGQSVNLDTRTTSGDSDRPERNAAASADEIGRRRLVREISNPGDFFAGQVSMVQRTSDAYFREPEEAAEECDSPPSPRRKPFGDLSTFHRKQLEQNPFRKRYDEYIDAEDFDRTPESQESSTSESNLLGENGASKMKYRPRMKLFGRKNA--VVSKLEKDRLRAKRHEKRKEDIARRSTILSGAIDRVSMAADPWIDFITDAKAMPVPEKTRGSLRRAVKRLFGGKGKQ 696
            MHVRELAARFERP   Q  S+S+  P+   +GSSVSEL +R E+ VIH+Q+  H +  +P  +       + P A+S   P LS P+    P  P     A   S  +P            HS P+    S   P+++ Q   P     +         QQ   L+   R  S+F++  +T S    +GS     SDF P +++D+G+IPDVSEGE+DDI+GIERV+D+DSQ E+ SS             S    + FQR +T+     SYRTEGGESLHI++ SYS                          + + R  T +  + S  TYS YS SPDTAP+SSFH STI SQ +FSRATT Y+AS E     NDF  A+ H +   Q            ++ +S+PS   P    V  A +            SV +  +S++S  P  V         A++++  Q+R   QGSIKRLPKAKVLIAR++G S++LD+   S  +  P + A+ SADEI  RRLVREI NPG+FFAG VSMVQR S+ +   P ++ +E D PPSP +KP G+LS+FHRKQL Q+ FR RYDEY+DAE+ +R+PES +SS SES LLGE   SK KYR RM+LFGRKN   +  KLEKDRLRAKRHEKRKEDIARRST+LSGA+DRVSMAADPWIDFITDAKAMPVPEK RGSLRRA+++LFGGKGKQ
Sbjct:    1 MHVRELAARFERPASAQP-SNSHSAPIRHFTGSSVSELRQRLERAVIHEQQQSHTS-LVPPRSETHPDPETQPHALST--PALSPPS---QPSPPYLRDHAHSSSQPVP------------HSPPVQQHASTDAPVSSEQQLQPADGQPQPVHPCASPPQQRHALQPDHRSSSQFSQLYATSSHYEQTGSYFSA-SDFAPHTLEDIGLIPDVSEGEIDDIEGIERVQDFDSQQEHPSSSPXXXXXXXXXXXSSTSEEHFQRTDTVHHIERSYRTEGGESLHIVEASYS------------AQSCAESIQQASSSLQAPRVITELSHNPSRVTYSQYSYSPDTAPLSSFHASTIPSQPIFSRATTAYTASSE-----NDFSSANNHFASSSQ------------LDKASSPSQRRPYSLPVSAAATQXXXXXXXXXXRSVQSPVESSTSPAPTSV-----HAHSADADL--QDRFVSQGSIKRLPKAKVLIARRKGHSMSLDSGGVSSITTEPYKPASVSADEIHNRRLVREIDNPGEFFAGHVSMVQRVSE-HSATPNDSFDEDDLPPSPSKKPLGELSSFHRKQLRQHAFRARYDEYLDAEELNRSPESDKSSRSESELLGEGPESKAKYRHRMRLFGRKNGGGIAGKLEKDRLRAKRHEKRKEDIARRSTMLSGALDRVSMAADPWIDFITDAKAMPVPEKARGSLRRAMRKLFGGKGKQ 665          
The following BLAST results are available for this feature:
BLAST of Gvermi12345.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3J444_9FLOR2.750e-15946.54Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 624..644
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 473..498
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 365..400
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 161..193
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 526..602
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 528..586
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 146..160
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 482..498
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 108..305
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 365..411
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 231..253
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 207..224

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_3404contigScGOVlb_3404:4295395..4297500 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi12345.t1Gvermi12345.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_3404 4295395..4297500 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi12345.t1 ID=Gvermi12345.t1|Name=Gvermi12345.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=702bp
MHVRELAARFERPVPTQTTSSSNVVPVHQLSGSSVSELCERFEQTVIHQQ
KDVHRNDSIPIPNSDKLQLSSHPSAVSNEAPLLSAPTIATTPVTPLASQT
ADEISAILPVFDAPSHEDDQHHSAPISDAFPIANMQTALPPQKPIEETRD
QVRAEQQHSELKQSQRIPSEFTEASSTHSQSTSSGSTVPPISDFVPQSID
DVGIIPDVSEGELDDIDGIERVEDYDSQDENQSSHTSSDNQNDTFQRAET
LSDPHVSYRTEGGESLHIIDGSYSHHESDGTNSNSSDYEGDKNSEEADNI
IFSDRASTLIRQDQSHQTYSGYSCSPDTAPMSSFHTSTIHSQVLFSRATT
YSASEEYKSTNNDFIPASKHGSPMVQNNSNARKTLQAEMNASSNPSSGFP
LGASVPPAPSPPSSVLALEDSTSSVRPNHVLDEVASEPEAESEVYSQNRI
CPQGSIKRLPKAKVLIARKRGQSVNLDTRTTSGDSDRPERNAAASADEIG
RRRLVREISNPGDFFAGQVSMVQRTSDAYFREPEEAAEECDSPPSPRRKP
FGDLSTFHRKQLEQNPFRKRYDEYIDAEDFDRTPESQESSTSESNLLGEN
GASKMKYRPRMKLFGRKNAVVSKLEKDRLRAKRHEKRKEDIARRSTILSG
AIDRVSMAADPWIDFITDAKAMPVPEKTRGSLRRAVKRLFGGKGKQSLIK
E*
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