Gvermi12339.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi12339.t1
Unique NameGvermi12339.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length94
Homology
BLAST of Gvermi12339.t1 vs. uniprot
Match: A0A2V3J435_9FLOR (Serine palmitoyltransferase small subunit A n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J435_9FLOR)

HSP 1 Score: 114 bits (285), Expect = 2.770e-31
Identity = 59/93 (63.44%), Postives = 70/93 (75.27%), Query Frame = 0
Query:    1 MTQPPTAVEPVSDGYGTYEESPNASHPQPNRSFKESVNLWIYRYNLSTALYMLEPWERALFNVIVIAILAYIVYGLYNAALHPLFEHIAISYM 93
            MT+P +  E  +     +E+      P   RSFKESV+LW+YRYNLSTALYMLEPWERALFN++VI+ILAY VYGLY +ALHPLFE IA SYM
Sbjct:    1 MTRPTSYTESATADE-EFEDETVVVQPPRTRSFKESVSLWVYRYNLSTALYMLEPWERALFNIVVISILAYTVYGLYYSALHPLFERIATSYM 92          
BLAST of Gvermi12339.t1 vs. uniprot
Match: A0A1X2HAL0_SYNRA (Uncharacterized protein n=1 Tax=Syncephalastrum racemosum TaxID=13706 RepID=A0A1X2HAL0_SYNRA)

HSP 1 Score: 54.7 bits (130), Expect = 5.160e-8
Identity = 23/47 (48.94%), Postives = 37/47 (78.72%), Query Frame = 0
Query:   24 ASHPQPNRSFKESVNLWIYRYNLSTALYMLEPWERALFNVIVIAILA 70
            A+  Q ++ F  +++  IY+Y L TALYMLEPWE+ALFN+I+++I++
Sbjct:    2 AATAQSHKQFSSAISKLIYQYELQTALYMLEPWEKALFNIILLSIIS 48          
BLAST of Gvermi12339.t1 vs. uniprot
Match: I1CUC0_RHIO9 (Uncharacterized protein n=1 Tax=Rhizopus delemar (strain RA 99-880 / ATCC MYA-4621 / FGSC 9543 / NRRL 43880) TaxID=246409 RepID=I1CUC0_RHIO9)

HSP 1 Score: 52.4 bits (124), Expect = 3.710e-7
Identity = 23/43 (53.49%), Postives = 34/43 (79.07%), Query Frame = 0
Query:   28 QPNRSFKESVNLWIYRYNLSTALYMLEPWERALFNVIVIAILA 70
            + NRS  + ++  +Y+Y L TALYMLEPWE+ALFN I+++IL+
Sbjct:    2 ESNRSISKFLSTKLYQYELQTALYMLEPWEKALFNTIMLSILS 44          
BLAST of Gvermi12339.t1 vs. uniprot
Match: A0A1X2J166_9FUNG (Uncharacterized protein n=1 Tax=Absidia repens TaxID=90262 RepID=A0A1X2J166_9FUNG)

HSP 1 Score: 51.2 bits (121), Expect = 1.560e-6
Identity = 24/44 (54.55%), Postives = 30/44 (68.18%), Query Frame = 0
Query:   25 SHPQPNRSFKESVNLWIYRYNLSTALYMLEPWERALFNVIVIAI 68
            S+   N  F + +   IY+Y L TALYMLEPWE+ALFN IVI +
Sbjct:   15 SNSNNNLGFSKYITTKIYQYELQTALYMLEPWEKALFNTIVICL 58          
BLAST of Gvermi12339.t1 vs. uniprot
Match: A0A8H7RYW1_9FUNG (Uncharacterized protein n=1 Tax=Mucor circinatus TaxID=2054153 RepID=A0A8H7RYW1_9FUNG)

HSP 1 Score: 50.8 bits (120), Expect = 1.600e-6
Identity = 20/41 (48.78%), Postives = 32/41 (78.05%), Query Frame = 0
Query:   30 NRSFKESVNLWIYRYNLSTALYMLEPWERALFNVIVIAILA 70
            N+    S++  IY+Y + + LYMLEPWE+ALFN+I+++I+A
Sbjct:    6 NKGLSSSISTLIYKYEVQSVLYMLEPWEKALFNIILLSIIA 46          
BLAST of Gvermi12339.t1 vs. uniprot
Match: A0A1X2G6B1_9FUNG (Uncharacterized protein n=1 Tax=Hesseltinella vesiculosa TaxID=101127 RepID=A0A1X2G6B1_9FUNG)

HSP 1 Score: 50.4 bits (119), Expect = 2.270e-6
Identity = 23/49 (46.94%), Postives = 35/49 (71.43%), Query Frame = 0
Query:   30 NRSFKESVNLWIYRYNLSTALYMLEPWERALFNVIVIAILAYIVYGLYN 78
            ++S    ++  IY+Y L TALYMLEPWE+ALFN ++++I++  V  LY 
Sbjct:    5 SKSLSSYISTKIYQYELQTALYMLEPWEKALFNTLLLSIISLSVVTLYQ 53          
BLAST of Gvermi12339.t1 vs. uniprot
Match: A0A168KPJ9_ABSGL (Uncharacterized protein n=1 Tax=Absidia glauca TaxID=4829 RepID=A0A168KPJ9_ABSGL)

HSP 1 Score: 50.4 bits (119), Expect = 2.320e-6
Identity = 23/48 (47.92%), Postives = 34/48 (70.83%), Query Frame = 0
Query:   31 RSFKESVNLWIYRYNLSTALYMLEPWERALFNVIVIAILAYIVYGLYN 78
            +S+ + ++  IY+Y L TALYMLEPWE+ALFN I++ I+   V  +Y 
Sbjct:    8 KSYSKYISTKIYQYELQTALYMLEPWEKALFNTIMLCIVGLSVLTMYQ 55          
BLAST of Gvermi12339.t1 vs. uniprot
Match: A0A433AZ11_9FUNG (Uncharacterized protein n=1 Tax=Jimgerdemannia flammicorona TaxID=994334 RepID=A0A433AZ11_9FUNG)

HSP 1 Score: 50.4 bits (119), Expect = 2.490e-6
Identity = 25/36 (69.44%), Postives = 28/36 (77.78%), Query Frame = 0
Query:   31 RSFKESVNLWIYRYNLSTALYMLEPWERALFNVIVI 66
            +S KE   L IY+Y L TALYMLEPWE+ALFN IVI
Sbjct:    7 KSLKEYTALKIYQYELVTALYMLEPWEKALFNSIVI 42          
BLAST of Gvermi12339.t1 vs. uniprot
Match: A0A397GVB5_9GLOM (Uncharacterized protein n=1 Tax=Diversispora epigaea TaxID=1348612 RepID=A0A397GVB5_9GLOM)

HSP 1 Score: 49.3 bits (116), Expect = 7.730e-6
Identity = 20/33 (60.61%), Postives = 28/33 (84.85%), Query Frame = 0
Query:   42 YRYNLSTALYMLEPWERALFNVIVIAILAYIVY 74
            Y Y ++TALYMLEPWE+ALFN IV+ +L +++Y
Sbjct:   14 YHYEITTALYMLEPWEKALFNSIVVVVLGFLIY 46          
BLAST of Gvermi12339.t1 vs. uniprot
Match: A0A1X2IKK5_9FUNG (Uncharacterized protein n=1 Tax=Absidia repens TaxID=90262 RepID=A0A1X2IKK5_9FUNG)

HSP 1 Score: 48.9 bits (115), Expect = 9.750e-6
Identity = 21/38 (55.26%), Postives = 29/38 (76.32%), Query Frame = 0
Query:   31 RSFKESVNLWIYRYNLSTALYMLEPWERALFNVIVIAI 68
            + F   ++  IY+Y L TALYMLEPWE+ALFN I+I++
Sbjct:   10 KGFSNYISTKIYQYELQTALYMLEPWEKALFNTIMISL 47          
The following BLAST results are available for this feature:
BLAST of Gvermi12339.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 10
Match NameE-valueIdentityDescription
A0A2V3J435_9FLOR2.770e-3163.44Serine palmitoyltransferase small subunit A n=1 Ta... [more]
A0A1X2HAL0_SYNRA5.160e-848.94Uncharacterized protein n=1 Tax=Syncephalastrum ra... [more]
I1CUC0_RHIO93.710e-753.49Uncharacterized protein n=1 Tax=Rhizopus delemar (... [more]
A0A1X2J166_9FUNG1.560e-654.55Uncharacterized protein n=1 Tax=Absidia repens Tax... [more]
A0A8H7RYW1_9FUNG1.600e-648.78Uncharacterized protein n=1 Tax=Mucor circinatus T... [more]
A0A1X2G6B1_9FUNG2.270e-646.94Uncharacterized protein n=1 Tax=Hesseltinella vesi... [more]
A0A168KPJ9_ABSGL2.320e-647.92Uncharacterized protein n=1 Tax=Absidia glauca Tax... [more]
A0A433AZ11_9FUNG2.490e-669.44Uncharacterized protein n=1 Tax=Jimgerdemannia fla... [more]
A0A397GVB5_9GLOM7.730e-660.61Uncharacterized protein n=1 Tax=Diversispora epiga... [more]
A0A1X2IKK5_9FUNG9.750e-655.26Uncharacterized protein n=1 Tax=Absidia repens Tax... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR024512Small subunit of serine palmitoyltransferase-likePFAMPF11779SPT_ssu-likecoord: 36..77
e-value: 1.6E-14
score: 53.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..30
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..58
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 78..93
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 59..77
NoneNo IPR availableTMHMMTMhelixcoord: 59..81

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_3404contigScGOVlb_3404:4271483..4271859 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi12339.t1Gvermi12339.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_3404 4271483..4271859 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi12339.t1 ID=Gvermi12339.t1|Name=Gvermi12339.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=94bp
MTQPPTAVEPVSDGYGTYEESPNASHPQPNRSFKESVNLWIYRYNLSTAL
YMLEPWERALFNVIVIAILAYIVYGLYNAALHPLFEHIAISYM*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR024512Ser_palmitoyltrfase_ssu-like