Gvermi12334.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi12334.t1
Unique NameGvermi12334.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length243
Homology
The following BLAST results are available for this feature:
BLAST of Gvermi12334.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000008C2 domainSMARTSM00239C2_3ccoord: 1..113
e-value: 1.6E-14
score: 64.2
IPR000008C2 domainPFAMPF00168C2coord: 2..113
e-value: 1.8E-16
score: 60.3
IPR000008C2 domainPROSITEPS50004C2coord: 1..115
score: 15.137222
IPR035892C2 domain superfamilyGENE3D2.60.40.150C2 domaincoord: 1..146
e-value: 3.5E-20
score: 74.4
IPR035892C2 domain superfamilySUPERFAMILY49562C2 domain (Calcium/lipid-binding domain, CaLB)coord: 2..131
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 226..242
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 200..242
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..142
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 166..242
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 143..165
NoneNo IPR availableCDDcd00030C2coord: 2..116
e-value: 2.03328E-16
score: 70.5587
NoneNo IPR availableTMHMMTMhelixcoord: 143..165

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_3404contigScGOVlb_3404:4260418..4261146 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi12334.t1Gvermi12334.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_3404 4260418..4261146 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi12334.t1 ID=Gvermi12334.t1|Name=Gvermi12334.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=243bp
MLTITIHSARDLRNADDGEGEQSDPYVLVCFDNKKDQELGRTPTVQNSQS
PTWDHEIQVDVAKHVQAAVDSGLDEPNMITFCVYDDDETESEPIGVAGIS
FAELVKKGKIKEQELPVFLGEGFITVSVSMKKVKKSTMLTNDAMVKIAGG
VAGAAALGIASGYLYNRYQKKKERLEDREGEEEVGEEEVVVAIEKPATGL
AYGYNEDSDDDDDENKGQMKRWWEMEDENDDDDEEERWGDAE*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000008C2_dom
IPR035892C2_domain_sf