Gvermi12300.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi12300.t1
Unique NameGvermi12300.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length526
Homology
BLAST of Gvermi12300.t1 vs. uniprot
Match: A0A2V3J067_9FLOR (Cytoplasmic dynein 1 intermediate chain 2 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J067_9FLOR)

HSP 1 Score: 625 bits (1612), Expect = 2.300e-219
Identity = 313/526 (59.51%), Postives = 399/526 (75.86%), Query Frame = 0
Query:    1 MDHHSEIEQRRKRLEQQKQNLISFQSLHNTRPHSQ---ETRREAPPSSHDRKPT--NRSFSRAPKAELNLPPSHDISHDESKESLSGVAISNKGSYLSELMGDAKFSSKFDLVPTEGDQQNKSKNHHYSASQHASDRSPLQFRITLKNDVTELRPTTAIKFHRKFDDIVVTSHGSRSDKRLSSEPGLNAIWRLDEGRSTLQRTLTANAAISAIELPSISPTLVIGGTVSGSVLFWDTRMKTSLPVHALEGNTAFVTGFHDREKVTAVKCTASSSPYFVSTSNGGHVCKWTLSKPDVPITRDTLRENATSAELNISSFDFPRSARLAGGEKTTANRFASLLIGGEDGGIYRADGNDSSWTVETALGKNHEAKVTAVSAHPFGHHVAFLDNVLLSASADWTLKLWYFHKSHQSVCIDTFDMVEYGRVNDVAWSNQHPTVFCAGSEAGYLSLFDISNRLLTSTNRNCWHFDMPDVSHNSEITSVQWDRVSKNVCAGSSNGTIFLWQCTSDFASLPDAEWTGQYLKSKQN 521
            MDH  EI++RR+RL++QK+ L   QS  +T  H      T   +  SS+  + +  + SFSRA KAELN+PPS    H     SL   + +   S L +L+GD  FSSK  L+P + +   K  +   S S   SD SPLQF++ L+++ TE RP TAIKFH KF++I++TSH  RSD +L ++PG+ A+W LDEGR  LQR LTANAAISAIELPSISPTL+I GT SGS+LFWDTR+KT+LP++AL+ +T  VT FHD++KVTAVK TA SSP+FVSTSNGGH+CKWTLSKP+VPIT+DTLR+N+TSAELNISSFDFPR+ +L+G    TA R  SL +G E GGIYRADG  SSW++E+A  ++HEA VTA+SAHPFG  VAFLD+V+LSAS DWT+KLWYFHKS  +VC+DTFDMV+ GRVND+AWS+QHPT+FC+G EAG+LSLFD+SN L ++  RNCW F  P+   N ++TSVQWD +S++VCAG+S GT+ LWQCT  FASLPDAEW G+YLKSK++
Sbjct:    1 MDHRLEIQERRRRLQRQKETLKDLQSFQSTTSHPSFHPNTLSGSSGSSNRNRNSFSSSSFSRALKAELNVPPSSSECHGTRPGSLLEHSDTANRSQLRDLLGDNNFSSKLGLIPVQQEDNGKPSSGDLS-SHGRSDGSPLQFQLALRDEATENRPNTAIKFHTKFNEILITSHDRRSDHKLFADPGVIAVWNLDEGRGALQRALTANAAISAIELPSISPTLIIAGTTSGSILFWDTRVKTALPINALDSSTTAVTSFHDKQKVTAVKTTAVSSPFFVSTSNGGHMCKWTLSKPEVPITKDTLRDNSTSAELNISSFDFPRTTKLSGDVNNTA-RMTSLFVGSESGGIYRADGGASSWSIESASKESHEAAVTAMSAHPFGRRVAFLDDVVLSASEDWTIKLWYFHKSQPAVCMDTFDMVQNGRVNDIAWSSQHPTMFCSGDEAGFLSLFDVSNHLSSTDGRNCWQFQTPESKENVQLTSVQWDYISRHVCAGNSKGTVSLWQCTPAFASLPDAEWMGRYLKSKRS 524          
BLAST of Gvermi12300.t1 vs. uniprot
Match: R7QF95_CHOCR (Dynein intermediate chain n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QF95_CHOCR)

HSP 1 Score: 318 bits (814), Expect = 2.590e-97
Identity = 166/348 (47.70%), Postives = 235/348 (67.53%), Query Frame = 0
Query:  133 SPLQFRITLKND-VTELRPTTAIKFHRKFDDIVVTSHGSRSDKRLSSEPGLNAIWRLDEGRSTLQRTLTANAAISAIELPSISPTLVIGGTVSGSVLFWDTRMKTSLPVHALEGNTAF-VTGFHDREKVTAVKCTASSSPYFVSTSNGGHVCKWTLSKPDVPITRDTLRENATSAELNISSFDFPRSARLAGGEKTTANRFASLLIGGEDGGIYRADGNDSSWTVETALGKNHEAKVTAVSAHPFGHHVAFLDNVLLSASADWTLKLWYFHKSHQSVCIDTFDMVEYGRVNDVAWSNQHPTVFCAGSEAGYLSLFDISNRLLTSTNRNCWHFDMPDVSHNSEITSVQW 478
            +PL F + L+++ VT  R  TAI FH+KF+DIV+++HG RSD ++  + G  A+W LD GR  LQR+L+AN+ ++AIEL  ISPTLVIGGT SG+++ WDTR+K+ LP++   GN A+     H RE VT +K +++ SP F+S++  G++ KW+LSKPD PITR  +R+   +AE+NIS  D P +ARL G E   +NR  S+  GG DG + R +G  +SWT ET+ GK HEA V A+SAHP     AFL++V+++ASADWTL+LW + +      +  FDM+E G V DV WS+QH TVF AG ++G LSLFD+S +L     +  + F +P  S +  I+ VQW
Sbjct:  279 APLSFEVALQDEEVTLSRRVTAINFHKKFEDIVISAHGERSDGKIGGDLGTVALWALDGGRGVLQRSLSANSPVTAIELMEISPTLVIGGTRSGNIVMWDTRVKSCLPINTF-GNEAWDPICSHGREMVTEIKTSSTVSPIFLSSATSGYLYKWSLSKPDSPITRTIVRDENGAAEMNISCLDLPHNARLYGEESRGSNRSFSVFAGGMDGSVNRLEGKGTSWTPETSCGK-HEASVHAISAHPLSSRSAFLNDVVITASADWTLRLWLYRRGLGCKELGNFDMMENGAVYDVKWSSQHATVFAAGDQSGTLSLFDVSGKL-GGEGQTEYQFKVPG-SESVGISRVQW 622          
BLAST of Gvermi12300.t1 vs. uniprot
Match: A0A177AYY4_9BILA (Cytoplasmic dynein 1 intermediate chain 1 n=1 Tax=Intoshia linei TaxID=1819745 RepID=A0A177AYY4_9BILA)

HSP 1 Score: 124 bits (312), Expect = 1.640e-26
Identity = 104/408 (25.49%), Postives = 165/408 (40.44%), Query Frame = 0
Query:  153 AIKFHRKFDDIVVTSHGSRSDKRLSSEPGLNAIWRLDEGRSTLQRTLTANAAISAIELPSISPTLVIGGTVSGSVLFWDTRMKTSLPVHALEGNTAFVTGFHDREKVTAVKCTASSSPY-FVSTSNGGHVCKWT---LSKPDVPITRDTLRENATSAELNISSFDFPRSARLAGGEKTTANRFASLLIGGEDGGIYRADGNDSSWTVETALGKNHEAKVTAVSAHPFGHHVAFLDNVLLSASADWTLKLWYFHKSHQSVCIDTFDMVEYGRVNDVAWSNQHPTVFCAGSEAGYLSLFDISNRL-----LTSTNRNCWHFDMPDVSHN----------------------------------SEITSV-------QWDRVSKNVCAGSSNGTIFLWQCTSDFASLPDAE 510
            A  +   + + +V+     S   + +  GL  +W L   + + + T T ++ + ++      P L+IGGT SG ++ WD R     PV      +A +  FH    V  +K   + + Y  VS S  G +C W    LS+P   I   + R++ + A  ++ S D               N F   L+GG+DG IY A  +D+   VE      H + VT++  HP  H +    N  L+ S DW+L++W          ++  +   Y       WS  +P +FC+ S+   LSL+DIS  L      TS N N      P  S                                    S +TSV       QW+  S ++ AGSSNGT+ ++       ++P  E
Sbjct:  314 ACSYMENYSNSLVSGCPVSSKCSVLNSDGLVMLWNLKYPKKSPEYTFTCHSTVLSLVFAPFHPNLIIGGTYSGQLVLWDMRSNHRSPVQH-SSISANINSFHTNP-VYCLKAIGTGNVYNLVSISTNGMLCLWNIDMLSQPQESIKLTSNRKSVSCACFSLMSNDH--------------NNF---LLGGDDGSIYGASFHDNCQNVEK-YSTRHGSAVTSIDVHPGQHDIVDFSNYFLTTSFDWSLEIWNSQAKKSIYRLENQENTSY--FYGAQWSPTNPALFCSSSDIVKLSLWDISKSLDTPIAKTSKNSNAGFHTRPSTSLKIQSPDLPEKDETINDNINHLKALKTSSPIKTTSFSHLTSVPFSFNKIQWNSNSSSIAAGSSNGTLHIYDVPEFMRTVPSNE 699          
BLAST of Gvermi12300.t1 vs. uniprot
Match: A0A4Y2EYF4_ARAVE (Cytoplasmic dynein 1 intermediate chain 2 n=3 Tax=Araneus ventricosus TaxID=182803 RepID=A0A4Y2EYF4_ARAVE)

HSP 1 Score: 124 bits (310), Expect = 2.520e-26
Identity = 90/369 (24.39%), Postives = 157/369 (42.55%), Query Frame = 0
Query:  149 RPTTAIKFHRKFDDIVVTSHGSRSDKRLSSEPGLNAIWRLDEGRSTLQRTLTANAAISAIELPSISPTLVIGGTVSGSVLFWDTRMKTSLPVHALEGNTAFVTGFHDREKVTAVKCTASSSPY-FVSTSNGGHVCKWTLSKPDVPITRDTLRENATSAELNISSFDFPRSARLAGGEKTTANRFASLLIGGEDGGIYRADGNDSSWTVETALGKNHEAKVTAVSAHPFGHHVAFLDNVLLSASADWTLKLWYFHKSHQSVCIDTFDMVEYGRVNDVAWSNQHPTVFCAGSEAGYLSLFDISNRLLTSTNRNCWHFDMPDVSH----NSEITSVQWDRVSKNVCAGSSNGTIFLWQCTSDFASLPDAEWT 512
            R  T+  +  +F +++V S+ +  D     + G+  +W +   ++T +      +A+ +       P LV+GGT SG ++ WD R     PV         ++       V  ++   + + +  VS S  G  C W+L     P     L     S  ++++S  FP            +  + + ++G E+G IY A  + S   +   L + H+  VT +S+H    H+ F  ++ LSAS DWT+KLW    S      +  D  +Y  V DVAWS  HP+VF      G L +++++N             ++P VS     N  +  V W      V  G   G ++++      A+  + EW+
Sbjct:  307 RTVTSFDWSSQFPELLVASYNNNEDSPHDPD-GVCLVWNMKFKKTTPEYIFHCQSAVMSTCFAKFHPNLVLGGTYSGQIVLWDNRSSKRTPVQRSP-----LSAIAHTHPVYCIQVVGTQNAHNLVSISTDGKFCTWSLDMLSAPQDTMELSHQKQSRPVSVTSLSFP------------SGDYNNFIVGSEEGTIYTASRHGSKAGIHE-LFEGHQGPVTGLSSHSAQGHIDF-SHLFLSASMDWTVKLWSLKDSKPLYSFE--DNGDY--VCDVAWSPVHPSVFACVDGMGRLDIWNLNNDT-----------ELPTVSAVADGNPALNRVVWTPSGHQVAVGDDLGRVYIYDVGEQLATPKNDEWS 640          
BLAST of Gvermi12300.t1 vs. uniprot
Match: X6PCA1_RETFI (Dynein cytoplasmic 1 intermediate chain 2-like protein n=1 Tax=Reticulomyxa filosa TaxID=46433 RepID=X6PCA1_RETFI)

HSP 1 Score: 115 bits (287), Expect = 1.790e-23
Identity = 91/354 (25.71%), Postives = 162/354 (45.76%), Query Frame = 0
Query:  162 DIVVTSHGSRSDKRLSSEPGLNAIWRLDEGRSTLQRTLTANAAISAIELPSISPTLVIGGTVSGSVLFWDTRMKTSLPVHALEGNTAFVTGF-----HDREKVTAVKCTASSSPYFVSTSNGGHVCKWTLSKPDVPITRDTLR--ENATSAELNISSFDFPRSARLAGGEKTTANRFASLLIGGEDGGIYRADG--NDSSWTVETALGKNHEAKVTAVSAHP----FGHHVAFLDNVLLSASADWTLKLWYFHKSHQSVCIDTFDMVEYGRVNDVAWSNQHPTVFCAGSEAGYLSLFDISNRLLTSTNRNCWHFDMPDVSHNSEITSVQWDRVSKNVCAGSSNGTIFLWQCTSD 502
            D+ +TS+ S +D  + S  G  A+W         +  L + + ++  +   I+  +++G T+SG +L WD R K++    +  G+++ V        H R+ +            F++ SN G +C W       P ++ T++  EN    E+  + F FP     A            +++G ++G +Y+ D    +    V+  + + H   +T V  HP     G H   +D + L++S DWT+KLW+  K+  S      DM +Y  V DV WS  HP VF  G  +G ++LFD++    +  N      +    S N  I+ + + +  KN+ AG S G + L+  +S+
Sbjct:  286 DLFLTSYAS-NDNLVGSPNGTVAVWNFMLPNKP-EYLLESQSMVTVAKFHPINAFIILGATMSGQILAWDVRAKSTPQFRSRSGHSSPVYSLQFLPTHHRKMLP-----------FLTVSNDGKICNWNEEILVEPQSQSTIKTKENRPD-EIPTTCFSFPLKDSKA------------VILGCDEGHLYKCDILLQNKELPVDHKIDEAHFGPITNVEFHPPAKKAGRH---MDMLFLTSSYDWTVKLWHLGKNKPSEVALFRDMQDY--VYDVKWSPSHPAVFACGDGSGKITLFDLNYDFESPVN------EPFQSSPNGSISKICFAKEGKNLLAGDSQGVVRLYDVSSN 602          
BLAST of Gvermi12300.t1 vs. uniprot
Match: A0A2A9M6Y9_9APIC (Cytoplasmic dynein intermediate chain n=1 Tax=Besnoitia besnoiti TaxID=94643 RepID=A0A2A9M6Y9_9APIC)

HSP 1 Score: 113 bits (283), Expect = 6.440e-23
Identity = 101/388 (26.03%), Postives = 162/388 (41.75%), Query Frame = 0
Query:  123 YSASQHASDRSPLQFRITLKNDVTEL---RPTTAIKFHRKFDDIVVTSHGSRSDKRLSSEPGLNAIWRLDEGRSTLQRTLTANAAISAIELPSISPTLVIGGTVSGSVLFWDTRMKTSLPVHALEGNTAFVTGFHDREKVTAVKCTASSSPYFVSTSNGGHVCKWTLSKPDVPITRDTLRENATSAELNISSFDFPRSARLAGGEKTTANRFASLLIGGEDGGIYRADGNDSSWTVETALGKNHEAKVTAVSAHPFGHHVA--FLDNVLLSASADWTLKLWYFHKSHQSVC--IDTFDMVEYGRVNDVAWSNQHPTVFCAGSEAGYLSLFDISNRLLTSTNRNCWHFDMPDVSHNSEITSVQWDRVSKNVCAGSSNGTIFLWQCTSDF 503
            YS  Q  SD S  + +      V  L   RP   ++    F ++ + S+G+  +       G   +W L+  +   + T T  +           P++++GGT SGS++ WDTR + S PV      T      H     +       ++   +S    G +C W+L     P   +TL     + E+ I    FP             N   SL++G EDG I +A+ + +   V  A  ++H   VT++  HP           ++LLS S DWT+KLW    S Q+    + TFD  E   V D AW   +P+VF      G+L L++++N   T   R C     P V+ N  +    W    + +  G + G + +W   S+F
Sbjct:  269 YSGVQRTSDASDEKIQRVAAYSVPNLTPERPVLDLRASPHFAEVFLASYGA-PEFGGDDAGGCVLLWSLNMNQRP-EYTFTCQSQACTAIFNRFQPSVILGGTYSGSIIVWDTRAQ-SKPVQ----RTPLSNQGHAHPVYSMELVGTQNAHNLISVDTDGRLCLWSLQMLGAPT--ETLDLKRGNKEVCIECLAFPD------------NEVNSLVLGSEDGCILQANIHGNKPGVSEAY-ESHAGAVTSLKFHPAAAEAGQRHYTDLLLSTSVDWTVKLW---SSKQTFAKPLHTFDDYEV-YVYDTAWHPTNPSVFSCVDGEGHLDLWNLANDWETPAYRVCKAESRPPVAKNKVV----WSGDGRRMMTGDAKGNVEVWSVASEF 626          
BLAST of Gvermi12300.t1 vs. uniprot
Match: A0A1Y3AZH3_EURMA (Cytoplasmic dynein 1 intermediate chain-like protein (Fragment) n=1 Tax=Euroglyphus maynei TaxID=6958 RepID=A0A1Y3AZH3_EURMA)

HSP 1 Score: 111 bits (277), Expect = 2.280e-22
Identity = 87/372 (23.39%), Postives = 153/372 (41.13%), Query Frame = 0
Query:  149 RPTTAIKFHRKFDDIVVTSHGSRSDKRLSSEP-GLNAIWRLDEGRSTLQRTLTANAAISAIELPSISPTLVIGGTVSGSVLFWDTRMKTSLPVHALEGNTAFVTGFHDREKVTAVKCTASSSPYFVSTSNGGHVCKWTLSKPDVPITRDTLRENATSAELNISSFDFPRSARLAGGEKTTANRFASLLIGGEDGGIYRADGNDSSWTVETALGKNHEAKVTAVSAHP---FGHHVAF--LDNVLLSASADWTLKLWYFH-KSHQSVCIDTF-DMVEYGRVNDVAWSNQHPTVFCAGSEAGYLSLFDISNRLLTSTNRNCWHFDMPDVSHNSEITSVQWDRVSKNVCAGSSNGTIFLWQCTSDFASLPDAEWT 512
            R  T+  +  +F +++V S+    ++   +EP G+  +W +   ++T +      +A+ +       P L++GGT SG ++ WD R    +PV      +      H             +S   +S SN G +C W+L     P     L +   S  + ++S  FP +             + + ++G +DG +Y A  + +   +     + H+  VTAV  H      HH     L ++ L+AS DWT KLW     S  S  + +F D  +Y  + DV WS  HP +F      G L L++++      T           +  N  +  + W    + +  G  NG I+++  +   A     EWT
Sbjct:  180 RTVTSFDWCSQFPELLVASYNQ--NEHAPNEPDGICLVWNMKFKKNTPEYVFHCQSAVMSACFAKFHPNLILGGTYSGQIVLWDNRSGKRVPVQ----RSPLSASVHTHPVYCLKVVGTPNSHNLISISNDGKLCSWSLDMLSQPQETMELCQQKQSRLIAVTSMSFPHAD------------YNNFILGSQDGAVYSACRHGAKAGILDVF-EGHQGPVTAVDFHSATSLVHHQVDQQLSHLFLTASFDWTFKLWSMRDNSTSSKLLYSFEDGSDY--LYDVRWSPIHPALFATADGLGKLDLWNLNQDTELPTLSTI-------IEGNPALNRLIWSPNGQQIVVGDDNGKIWVYDVSEQLAFPKSDEWT 523          
BLAST of Gvermi12300.t1 vs. uniprot
Match: A0A6P6XTP8_DERPT (cytoplasmic dynein 1 intermediate chain 2-like isoform X1 n=6 Tax=Dermatophagoides TaxID=6953 RepID=A0A6P6XTP8_DERPT)

HSP 1 Score: 111 bits (278), Expect = 3.260e-22
Identity = 88/372 (23.66%), Postives = 153/372 (41.13%), Query Frame = 0
Query:  149 RPTTAIKFHRKFDDIVVTSHGSRSDKRLSSEP-GLNAIWRLDEGRSTLQRTLTANAAISAIELPSISPTLVIGGTVSGSVLFWDTRMKTSLPVHALEGNTAFVTGFHDREKVTAVKCTASSSPYFVSTSNGGHVCKWTLSKPDVPITRDTLRENATSAELNISSFDFPRSARLAGGEKTTANRFASLLIGGEDGGIYRADGNDSSWTVETALGKNHEAKVTAVSAHP---FGHHVAF--LDNVLLSASADWTLKLWYFH-KSHQSVCIDTF-DMVEYGRVNDVAWSNQHPTVFCAGSEAGYLSLFDISNRLLTSTNRNCWHFDMPDVSHNSEITSVQWDRVSKNVCAGSSNGTIFLWQCTSDFASLPDAEWT 512
            R  T+  +  +F +++V S+    ++   +EP G+  +W +   ++T +      +A+ +       P L++GGT SG ++ WD R    +PV      +      H             +S   +S SN G +C W+L     P     L +   S  + ++S  FP +             + + ++G +DG +Y A  + +   +     + H+  VTAV  H      HH     L ++ L+AS DWT KLW     S  S  + +F D  +Y  + DV WS  HP +F      G L L++++      T           V  N  +  + W    + +  G  NG I+++  +   A     EWT
Sbjct:  404 RTVTSFDWCSQFPELLVASYNQ--NEHAPNEPDGICLVWNMKFKKNTPEYVFHCQSAVMSACFAKFHPNLILGGTYSGQIVLWDNRSGKRVPVQ----RSPLSASVHTHPVYCLKVVGTPNSHNLISISNDGKLCSWSLDMLSQPQETMELCQQKQSRLIAVTSMSFPHAD------------YNNFILGSQDGAVYSACRHGAKAGILDVF-EGHQGPVTAVDFHSATSLVHHQVDQQLSHLFLTASFDWTFKLWSMRDNSTSSKLLYSFEDGSDY--LYDVRWSPIHPALFATADGLGKLDLWNLNQDTELPTLSTI-------VEGNPALNRLIWSPNGQQIVVGDDNGKIWVYDVSEQLAFPKSDEWT 747          
BLAST of Gvermi12300.t1 vs. uniprot
Match: A0A0D2WJ75_CAPO3 (Uncharacterized protein n=2 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2WJ75_CAPO3)

HSP 1 Score: 111 bits (277), Expect = 3.420e-22
Identity = 89/371 (23.99%), Postives = 159/371 (42.86%), Query Frame = 0
Query:  149 RPTTAIKFHRKFDDIVVTSHGSRSDKRLSSEP-GLNAIWRLDEGRSTLQRTLTANAAISAIELPSISPTLVIGGTVSGSVLFWDTRMKTSLPVHALEGNTAFVTGFHDREKVTAVKCTASSSPYFVSTSNGGHVCKWTLSKPDVPITRDTLRENATSAELNISSFDFPRSARLAGGEKTTANRFASLLIGGEDGGIYRADGNDSSWTVETALGKNHEAKVTAVSAHPFGHHVAFLDNVLLSASADWTLKLWYFHKSHQSVCIDTFDMVEYGRVNDVAWSNQHPTVFCAGSEAGYLSLFDISNRLLTSTNRNCWHFDMPDVS-----HNSEITSVQWDRVSKNVCAGSSNGTIFLWQCTSDFASLPDAEWTG 513
            R  T++++  K  +++   +G       S +P G+  +W L   +   +   T  +A+ ++ L    P L++GGT SGS++ WDTR KT+ PV      T   +  H             ++   +S S  G +C W++     P T+   R       L  ++  FP             +  A  ++GGEDG +     +     V + L   H   VTAV +HP  ++    +++++S+S DW++KLW    S     I +F+      + D  WS  HP VF     A  L L++++  +           ++P VS     + + +  ++W      V  G ++GT+ ++     FA  P A+ T 
Sbjct:  269 RAITSMQWSPKHPELLAVGYGINPAS--SQDPDGVVLLWNLHLPQRP-ELVFTCQSAVMSVCLSKFHPNLIVGGTYSGSIVLWDTRAKTT-PVQ----RTPLTSACHTHPVYCLEMVGTQNAHNLISVSTDGRMCAWSMDMFAQPQTKSEPRHERLPI-LAATALAFPE------------DEIAHFIVGGEDGTVGLGSRHGRQAGVHSTLA-GHHGPVTAVHSHPTINNYRDFNDLIISSSMDWSVKLW---SSKSRTPIHSFE-ASGDYIYDAQWSPVHPAVFATVDGASRLDLWNLNGDI-----------EVPAVSTTIDANGAALNRLRWSADGSKVAVGDADGTVHVYNIGEKFAQ-PRADETS 601          
BLAST of Gvermi12300.t1 vs. uniprot
Match: U5EWN8_9DIPT (Putative cytoplasmic dynein intermediate chain n=2 Tax=Culicoidea TaxID=41827 RepID=U5EWN8_9DIPT)

HSP 1 Score: 110 bits (276), Expect = 4.740e-22
Identity = 92/379 (24.27%), Postives = 162/379 (42.74%), Query Frame = 0
Query:  149 RPTTAIKFHRKFDDIVVTSHGSRSDKRLSSEP-GLNAIWRLDEGRSTLQRTLTANAAISAIELPSISPTLVIGGTVSGSVLFWDTRMKTSLPVHALEGNTAFVTGFHDREKVTAVKCTASSSPYFVSTSNGGHVCKWTLSKPDVPITRDTLR-ENATSAELNISSFDFPRSARLAGGEKTTANRFASLLIGGEDGGIYRA--DGNDSSWTVETALGKNHE---AKVTAVSAH------PFGHHVAFLDNVLLSASADWTLKLWYFHKSHQSVCIDTFDMVEYGRVNDVAWSNQHPTVFCAGSEAGYLSLFDISNRLLTSTNRNCWHFDMPDVSH--NSEITSVQWDRVSKNVCAGSSNGTIFLWQCTSDFASLPDAEWT 512
            R  T+I +   F +++V S+   +++   +EP G+  +W     + T +      +A+ +       P L++GGT SG ++ WDTR++   P+      T      H             ++   +S S+ G +C W+L     P  +DTL  ++  S  + ++   FP             N   + ++G EDG ++ A   GN S       +G+ +E     VT +S H       FGH       + L++S DWT+KLW    +      +  D  +Y  V DVAWS  HP +F +   +G L L++++              ++P VS   +S +  V W     +V  G  +G I+++    + A     EW+
Sbjct:  282 RCVTSIDWSTHFPELMVASY--HNNEECPNEPDGVVIVWNTKYKKQTAEDVFHCQSAVMSTCFAKFHPNLILGGTYSGQIVLWDTRVQKRTPIQ----RTPLSANAHTHPVYCLSMVGTQNAHNVISISSDGKLCSWSLDMLSAP--QDTLELQHRQSKAIAVTCMAFPH------------NEVNNFVLGSEDGYVHSACRHGNRSG------IGETYEKHLGPVTGISTHHNQSSPDFGH-------LFLTSSIDWTIKLWSLKDNKPLYSFE--DNSDY--VMDVAWSPVHPALFASVDGSGRLDLWNLNQDT-----------EVPSVSTMISSALNRVSWTPSGLHVTVGDDSGKIYVYDVADNVAIPRSDEWS 612          
The following BLAST results are available for this feature:
BLAST of Gvermi12300.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J067_9FLOR2.300e-21959.51Cytoplasmic dynein 1 intermediate chain 2 n=1 Tax=... [more]
R7QF95_CHOCR2.590e-9747.70Dynein intermediate chain n=1 Tax=Chondrus crispus... [more]
A0A177AYY4_9BILA1.640e-2625.49Cytoplasmic dynein 1 intermediate chain 1 n=1 Tax=... [more]
A0A4Y2EYF4_ARAVE2.520e-2624.39Cytoplasmic dynein 1 intermediate chain 2 n=3 Tax=... [more]
X6PCA1_RETFI1.790e-2325.71Dynein cytoplasmic 1 intermediate chain 2-like pro... [more]
A0A2A9M6Y9_9APIC6.440e-2326.03Cytoplasmic dynein intermediate chain n=1 Tax=Besn... [more]
A0A1Y3AZH3_EURMA2.280e-2223.39Cytoplasmic dynein 1 intermediate chain-like prote... [more]
A0A6P6XTP8_DERPT3.260e-2223.66cytoplasmic dynein 1 intermediate chain 2-like iso... [more]
A0A0D2WJ75_CAPO33.420e-2223.99Uncharacterized protein n=2 Tax=Capsaspora owczarz... [more]
U5EWN8_9DIPT4.740e-2224.27Putative cytoplasmic dynein intermediate chain n=2... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 4..24
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 106..131
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..17
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 32..55
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..79
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 108..131
NoneNo IPR availablePANTHERPTHR12442DYNEIN INTERMEDIATE CHAINcoord: 12..510
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 455..498
e-value: 0.058
score: 22.5
coord: 405..446
e-value: 0.57
score: 18.6
coord: 352..399
e-value: 0.49
score: 18.9
coord: 236..285
e-value: 4.0
score: 13.2
coord: 192..231
e-value: 17.0
score: 9.2
IPR001680WD40 repeatPFAMPF00400WD40coord: 468..497
e-value: 0.047
score: 14.6
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 466..498
score: 9.505904
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 323..518
e-value: 4.3E-18
score: 67.5
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 139..319
e-value: 3.4E-10
score: 41.5
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 151..497

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_3404contigScGOVlb_3404:4134290..4135867 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi12300.t1Gvermi12300.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_3404 4134290..4135867 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi12300.t1 ID=Gvermi12300.t1|Name=Gvermi12300.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=526bp
MDHHSEIEQRRKRLEQQKQNLISFQSLHNTRPHSQETRREAPPSSHDRKP
TNRSFSRAPKAELNLPPSHDISHDESKESLSGVAISNKGSYLSELMGDAK
FSSKFDLVPTEGDQQNKSKNHHYSASQHASDRSPLQFRITLKNDVTELRP
TTAIKFHRKFDDIVVTSHGSRSDKRLSSEPGLNAIWRLDEGRSTLQRTLT
ANAAISAIELPSISPTLVIGGTVSGSVLFWDTRMKTSLPVHALEGNTAFV
TGFHDREKVTAVKCTASSSPYFVSTSNGGHVCKWTLSKPDVPITRDTLRE
NATSAELNISSFDFPRSARLAGGEKTTANRFASLLIGGEDGGIYRADGND
SSWTVETALGKNHEAKVTAVSAHPFGHHVAFLDNVLLSASADWTLKLWYF
HKSHQSVCIDTFDMVEYGRVNDVAWSNQHPTVFCAGSEAGYLSLFDISNR
LLTSTNRNCWHFDMPDVSHNSEITSVQWDRVSKNVCAGSSNGTIFLWQCT
SDFASLPDAEWTGQYLKSKQNVLVQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR036322WD40_repeat_dom_sf