Gvermi12294.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi12294.t1
Unique NameGvermi12294.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length325
Homology
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BLAST of Gvermi12294.t1 vs. uniprot
Match: A0A2V3IMR5_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IMR5_9FLOR)

HSP 1 Score: 176 bits (447), Expect = 1.730e-49
Identity = 117/237 (49.37%), Postives = 154/237 (64.98%), Query Frame = 0 
Query:   22 LSSEINSLSDHQLKKLTRSNTRRNLGGRKKRFLSQLERVCRRLELINLSSP-VSPEPLTGGLHALPIVNPDGSSHAPQVDTKEHAARIDEIEPQPDQLEEQRPADLRMPRRAQTPRFAKD-SPFAQRDPTPNSQTSVSPASSTDEDDYAIEPATVCVAHEGVTSTTLTTKSFRSVRISTEVTILGYGPQNRTGEPLSLSVSTMRRTEHPTRTGRGFHLNGRLGNDNRFPRAMSAMER 256
            LSSEI+SLS++QLK+LTRSNTRRNLG R+ RF+SQLERVC+RL+L+N++   ++  P    L A PIVNPDG+    ++   E  A I          E++R   L    R  TPR + + + F   D T +S  S   A+ ++++D+ IEPAT C A+E  T++T   KSFRSVRIST VTIL Y P+N+ GEP+S SVST  RTEHPTR G+G  L   L   N FPRAMS++ R
Sbjct:   16 LSSEIDSLSENQLKRLTRSNTRRNLGTRRSRFMSQLERVCQRLDLMNITPEFITKTPALPQLKATPIVNPDGT-FVTKIAKNEGGAAISP--------EDERQRGLN---RVPTPRVSSNCAAFFNDDSTNDSDYSELNAAPSEDEDFLIEPATDCSANEACTAST---KSFRSVRISTTVTILDYCPKNKRGEPISFSVSTQHRTEHPTRNGKGLQLRRDLAEQNSFPRAMSSLGR 237
The following BLAST results are available for this feature:
BLAST of Gvermi12294.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IMR5_9FLOR1.730e-4949.37Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 97..134
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..50
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 251..265
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 288..310
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 82..171
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 145..162
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 19..35
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 246..324

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_3404contigScGOVlb_3404:4121511..4122485 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi12294.t1Gvermi12294.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_3404 4121511..4122485 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi12294.t1 ID=Gvermi12294.t1|Name=Gvermi12294.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=325bp
MQTPTRVPQSPKTPRTPTSPPLSSEINSLSDHQLKKLTRSNTRRNLGGRK
KRFLSQLERVCRRLELINLSSPVSPEPLTGGLHALPIVNPDGSSHAPQVD
TKEHAARIDEIEPQPDQLEEQRPADLRMPRRAQTPRFAKDSPFAQRDPTP
NSQTSVSPASSTDEDDYAIEPATVCVAHEGVTSTTLTTKSFRSVRISTEV
TILGYGPQNRTGEPLSLSVSTMRRTEHPTRTGRGFHLNGRLGNDNRFPRA
MSAMERNRRIRMIDSGSRDGSSAGSGKAPDVYPRGAQSSKPTLRTQTDSP
GRSQPGGQLTKDAGASPKAGAARK*
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