Gvermi12292.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi12292.t1
Unique NameGvermi12292.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length977
Homology
BLAST of Gvermi12292.t1 vs. uniprot
Match: A0A2V3J0I8_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J0I8_9FLOR)

HSP 1 Score: 859 bits (2219), Expect = 1.120e-297
Identity = 479/978 (48.98%), Postives = 649/978 (66.36%), Query Frame = 0
Query:    6 HEHFASSKEPQAFRIRRPSNRESVIYSKSSVLQECSPLTKFEFRRRREHFQEPTSWLERSELSSKTFNAHDFLQRSLLHRHDRSGTKIPHLPMLDSSVDADAALATLDTVETTLRTHRDQSVCEELSARDKLKQALHASSKKREELTTTAKKVCANVTTFGGAGKQAVKALQEGNLSLNTLLSSLLLLVDARDLVALLTDQASELDAVHVSKLLAKASKILEGSQIKDHLTTDELENAKSEIHSCQGDLVESIFDWMREALDTANSITVRDCALAASELDVYDRFVHEYISYVVSTDVETTPDERCP--ADTDQVLQIFKATCSDTISVFRGIISNIVDIFVDPSMPLSIFIRSITETKVNSEAMKIFSETEGRIKNDAIETKLEVGESQNNMKKEAHSKSCKTLFPSLE-SCRASLTTLSEDDGEVQRDELMEKKKHLVVSADVFREMVKYKLDIRNTCRDLGQVVAKSVFSALEDSQADFFNREIRRYLELEKKWIDDQLAVAFISISQMESIMPNLVPTKQSDPKMFHQYVSFYDEATANFKDITLTVIEFTYESICRLSDVVLS------RSQGTQEEIYENCLRPEKFSGKDFLMQCSKPDVDLTSTVLDSSESWPELQAEQPKRVSDEENDDGSFGEIPMRGKLVVDVRNVIHEMLRGMMVMYLANAETVLQAAAPLLPVCKEDAVNEQLWTMSSSPLTAYTMAVENLVQANELMADFLLNLKSSETHVLDSSEFIEPQVATCHLVSQETRDVLHAELVGSLNELGAEAQQGVKAAISAMHLRVSAILFAPEATQPYTSTNDHVQAVYDGFEGRQEPLDVVKPKPSKAFIEVCEFLDHQIHFIVKNIKSCNRDFILAEVASLTRDSIMKCWCCSPGHISLSGAMQMIADSRMVFKPFQKHGIPVQTLRCLPSLAQLFLESPDGLWACIEGSALVDVDARILVGLLKKRIDFGSREIVKICQSLGASEEELLT 974
            H    SS EPQAFRIRR S R+S++Y  S   +  S LT  + R+ REHFQEPTSWL++ EL S +F+AH FLQRS++  HDR+GT IPHLP+ DS +DAD ALATLDTVE+TLR +RDQS+ EE SAR++L++ LH S+KK+EEL +T+ KV ANVT FG AGKQAV +L+EG +SLN  +SSLL LV+ARDLVALLTDQAS+LDAVHVSKLLAKAS+IL G  +K  ++ DE +NA+SE++ CQ +L + IF WMR+A+D++++ TVRDCALAA+EL +YDRFV EY+ Y+VS  +E  P    P  A  D +L  F A CSD +   R +I  IVD FVDP  PL++ +R +TE +V S A  I +  +     +A        + +N   +    KS +  FP        SLT   E + +V +  ++++K++LV+  ++F+ + KYK DI +T   L   +A+  F A E   A F   +   YLELEKKW+DDQLA AF SIS +E+ +P L PT +SD ++FH+Y  FY++ +  FK  T+  I+ T+E+I R+S+V L+      RS+    +   N        GK      S     ++S  ++S  +   L           E+   SF +    G L   +R  I ++LRG++++Y+ANAET LQAAAPLLP CKEDAV E+LW  ++SPLTAY MAVE L QANELMA FLL+LK +++H  D+  F+  +     LVSQETRD+LH++L G L ELGAEAQQGVKAA SA+  R++A+L  PEA   Y+S +D  +      + R   L++ K +P+ AFI+ C+FL+ QI F+  N+  CNRDFIL E+  L RD ++ CW   P  I+L G+MQMIADSR++   FQ HG+ V+ +RCLPSLAQLFLE P+GLW+C+E SAL +VDAR+LV +LKKR DFGSR I+K+CQSLGA+ EEL T
Sbjct:    4 HHALESSNEPQAFRIRRLSKRDSILYPNSLGEESSSALTSLKIRKEREHFQEPTSWLQKDELVSTSFDAHGFLQRSIMECHDRNGTNIPHLPVFDSVIDADLALATLDTVESTLRVYRDQSLDEEFSARERLRRMLHTSAKKKEELNSTSDKVLANVTNFGEAGKQAVNSLKEGIVSLNAQISSLLSLVEARDLVALLTDQASQLDAVHVSKLLAKASRILRGEAVKSVISMDERKNAESEVNGCQQELTDRIFTWMRDAVDSSSNTTVRDCALAATELGLYDRFVREYVHYLVS--LEEVPASEAPSGAQVDNMLASFTAICSDAVRTIRNVIPAIVDTFVDPLAPLAVLVRLVTEKRVLSGASLILNCAKREA--EATRETSRSDDCRNRRGEGFGRKSDREKFPRPSFGHHFSLTASDERENDVHQG-IIDRKRYLVLHTELFKALAKYKTDILDTHHQLSLPIAEDAFWASEGPYATFVTEQALSYLELEKKWVDDQLATAFSSISGIEARLPQLAPTPRSDFRVFHKYARFYNQVSTGFKQTTVLCIDITFEAIHRMSEVFLAFTADSVRSKLKDSDPGGNTRNDSICLGKSEEQHPSS----ISSGTIESRSALSPLS----------EDGTASFAKAVPEGTLATRIRVAIQDVLRGLLLLYVANAETALQAAAPLLPTCKEDAVLEELWVFTASPLTAYVMAVEVLSQANELMARFLLSLKKAKSHETDAEGFLVLETPLNLLVSQETRDLLHSQLRGGLEELGAEAQQGVKAATSAVGFRLNAMLSVPEAVNAYSSVSDTKRLSKVPEKQRARLLNIPKLQPTNAFIKACKFLEQQIIFVASNVNECNRDFILWELGVLARDVVLHCWSKGPPPITLKGSMQMIADSRIILSTFQNHGVSVEAVRCLPSLAQLFLEPPEGLWSCVESSALTNVDARVLVSMLKKRPDFGSRGIIKVCQSLGANVEELST 962          
BLAST of Gvermi12292.t1 vs. uniprot
Match: R7QC67_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QC67_CHOCR)

HSP 1 Score: 449 bits (1154), Expect = 8.580e-139
Identity = 301/874 (34.44%), Postives = 483/874 (55.26%), Query Frame = 0
Query:   47 EFRRRREHFQEPTSWLERSELSSKTFNAHDFLQRSLLHRHDRSGTKIPHLPMLDSSVDADAALATLDTVETTLRTHRDQSVCEELSARDKLKQALHASSKKREELTTTAKKVCANVTTFGGAGKQAVKALQEGNLSLNTLLSSLLLLVDARDLVALLTDQASELDAVHVSKLLAKASKILEGSQIKDHLTTDELENAKSEIHSCQGDLVESIFDWMREALDTANSITVRDCALAASELDVYDRFVHEYISYVVSTDVETTPDERCPA-------DTDQVLQIFKATCSDTISVFRGIISNIVDIFVDPSMPLSIFIRSITETKVNSEAMKIFSETEGRIKNDAIETKLEVGESQNNMKKEAHSKSCKTLFPSLESCRASLTTLS-EDDGEVQRDE----LMEKKKHLVVSADVFREMVKYKLDIRNTCRDLGQVVAKSVFSALE-DSQADFFNREIRRYLELEKKWIDDQLAVAFISISQMESIMPNLVPTKQSDPKMFHQYVSFYDEATANFKDITLTVIEFTYESICRLSDVVLSRSQGTQEEIYENCLRPEKFSGKDFLMQCSKPD---VDLTSTVLDSSESWPELQAEQPKRVSDEENDDGSFGEIPMRGK-LVVDVRNVIHEMLRGMMVMYLANAETVLQAAAPLLPVCKEDAVNEQLWTMSSSPLTAYTMAVENLVQANELMADFLLNLKSSETHVLDSSEFIEPQVATCHLVSQETRDVLHAELVGSLNELGAEAQQGVKAAISAMHLRVSAILFAPEATQPYTSTNDHVQAVYDGFEGRQEPLDV-VKPKPSKAFIEVCEFLDHQIHFIVKNIKSCNRDFILAEVASLTRDSIMKCWCCSPGHISLSGAMQMIADSRMVFKPFQKH 902
            +F+  + H  EP SWL  S+LSS +F+AHDFLQ +L  R++ S  +  HLP+L  S +ADAALA LDTVE+ LR  RD S  EE  ARD+L++ LH S+KK+E+L   A  V ANV+  G AG+QA  AL     +L T  S L  L D RDLV+LLT ++SELD V VS+LL+KA    E   +   L+ D+   A+ EI  C+ +L  S+  WMR ++D  N+  V++CA+AA EL++   F+  YISY+   D  T PD+   A       ++  +LQ F+    +T++    +I +I   F + S  +   +R ++E KV    + I   T   + +  + T      S NN + +    +  T + +       L +LS  ++ E +R+E    L++K++ L V  +VF+ M K + D+   C  + +     +F     D    F  + + + L  EK W+D QL  AF  I+++E+  P L P + SD   +H+Y SFY + ++ +  +T   IE T+ES+CR++ ++               L  E  S KDF+   ++ +   +   S +   SES  + +  Q +R    E          M  K  + ++  V+ EML G+++ YLANAET+LQAA+ LLP+ + DA    LW    SPLTAY  AVE L+++N+ +++FLL L+ S+     SS  + P+      +   TR+ LH +L   L++LGAEAQ GV+AA++++  R+ A+L + +A Q Y S N    AV++    +Q P  + +  +PS AF+    F++ Q+H ++ N+ S NR+F+++E++ + ++++++ WC   G + L+GA Q+IAD R + + FQ H
Sbjct:  100 DFQPSQSHPFEPASWLIASDLSSPSFSAHDFLQSALFQRYEAS--RPSHLPVLGDSFNADAALAALDTVESGLRRQRDVSKREEDLARDELRKVLHLSAKKKEQLVRAADTVSANVSALGEAGRQAALALNADVSTLRTSASQLATLQDTRDLVSLLTTESSELDVVRVSRLLSKARNHCEDGSLAAVLSEDDYLVAREEIERCENELASSLDSWMRNSVDAGNNNIVKECAMAAEELNISASFIDSYISYIFRLD-HTGPDDSNGALRGIEHMNSQDMLQKFRIAAWETVNSVGEMIPSISQSFNNSSKTMISLLRLLSERKV----IPIADHTMHSLLSQHVSTT-----SLNNDRADDFLSTTPTRYATARDSVEILRSLSITENREEKREEADSVLLQKRQDLTVCGEVFKSMGKLRNDLLVQC-SIPECNHSKIFQEQGMDPFICFARKWVPQLLRQEKAWVDQQLGAAFFDITRVEANAPRLAPRENSDAAAYHRYRSFYSQISSRYLQMTGNAIESTHESLCRIATIL------------STVLSIESLSLKDFVASFTEAEQSPMHENSLLEHISESVLKAERFQERREVLTEGTASPKINTTMSSKHAIAEISAVLREMLDGLVICYLANAETILQAASHLLPISEADAQAHDLWVSGVSPLTAYMQAVEVLLRSNQALSEFLLTLEFSDHVSQFSSPSLSPEDELAMYIPSRTRERLHRDLTTGLSDLGAEAQVGVRAAVTSVRARLFAMLSSKDAMQAYVSLNRDDSAVFNE-NLKQGPSSLGMDVEPSPAFLNASAFVEQQLHSVLSNVHSANREFVISELSVIAKETVLQHWCLCAGPLFLAGAFQLIADGRAMARVFQDH 947          
The following BLAST results are available for this feature:
BLAST of Gvermi12292.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3J0I8_9FLOR1.120e-29748.98Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QC67_CHOCR8.580e-13934.44Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 614..633

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_3404contigScGOVlb_3404:4110821..4113751 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi12292.t1Gvermi12292.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_3404 4110821..4113751 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi12292.t1 ID=Gvermi12292.t1|Name=Gvermi12292.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=977bp
MVDTRHEHFASSKEPQAFRIRRPSNRESVIYSKSSVLQECSPLTKFEFRR
RREHFQEPTSWLERSELSSKTFNAHDFLQRSLLHRHDRSGTKIPHLPMLD
SSVDADAALATLDTVETTLRTHRDQSVCEELSARDKLKQALHASSKKREE
LTTTAKKVCANVTTFGGAGKQAVKALQEGNLSLNTLLSSLLLLVDARDLV
ALLTDQASELDAVHVSKLLAKASKILEGSQIKDHLTTDELENAKSEIHSC
QGDLVESIFDWMREALDTANSITVRDCALAASELDVYDRFVHEYISYVVS
TDVETTPDERCPADTDQVLQIFKATCSDTISVFRGIISNIVDIFVDPSMP
LSIFIRSITETKVNSEAMKIFSETEGRIKNDAIETKLEVGESQNNMKKEA
HSKSCKTLFPSLESCRASLTTLSEDDGEVQRDELMEKKKHLVVSADVFRE
MVKYKLDIRNTCRDLGQVVAKSVFSALEDSQADFFNREIRRYLELEKKWI
DDQLAVAFISISQMESIMPNLVPTKQSDPKMFHQYVSFYDEATANFKDIT
LTVIEFTYESICRLSDVVLSRSQGTQEEIYENCLRPEKFSGKDFLMQCSK
PDVDLTSTVLDSSESWPELQAEQPKRVSDEENDDGSFGEIPMRGKLVVDV
RNVIHEMLRGMMVMYLANAETVLQAAAPLLPVCKEDAVNEQLWTMSSSPL
TAYTMAVENLVQANELMADFLLNLKSSETHVLDSSEFIEPQVATCHLVSQ
ETRDVLHAELVGSLNELGAEAQQGVKAAISAMHLRVSAILFAPEATQPYT
STNDHVQAVYDGFEGRQEPLDVVKPKPSKAFIEVCEFLDHQIHFIVKNIK
SCNRDFILAEVASLTRDSIMKCWCCSPGHISLSGAMQMIADSRMVFKPFQ
KHGIPVQTLRCLPSLAQLFLESPDGLWACIEGSALVDVDARILVGLLKKR
IDFGSREIVKICQSLGASEEELLTGL*
back to top