Gvermi12280.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi12280.t1
Unique NameGvermi12280.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length175
Homology
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BLAST of Gvermi12280.t1 vs. uniprot
Match: A0A2V3J347_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J347_9FLOR)

HSP 1 Score: 187 bits (474), Expect = 1.470e-57
Identity = 100/154 (64.94%), Postives = 114/154 (74.03%), Query Frame = 0 
Query:   21 FAVLEARCDALRVPLPLSASPPCTARPGPVPLDAFSAEVLSFFLPAHAVESDAVDPTASVKRTAERPARASDGKPKGVKRQKRFVSNWTPDMDKIVRKSLSKFGWGCWARIAASGKLPKEYTAKMIANRAKSIGLTKNMFGPAVASTRTKAQSR 174
             AVL AR  ALR PLP S  P     P P  LD FS E LSFF+ A +  + +   ++S+KR A  P+ ++D   K  KRQKRFVSNWTPDMDKIVRKSL+KFGWGCWARIAASGKLPKEYTAKMIANRAKSIGL K+MFGPA+A TRTK  +R
Sbjct:   23 LAVLAARSQALRAPLPFS-EPVSEHAPPPPALDPFSVESLSFFVHAPSATAPSSQGSSSLKRPAPNPSPSNDKSAKTAKRQKRFVSNWTPDMDKIVRKSLAKFGWGCWARIAASGKLPKEYTAKMIANRAKSIGLNKHMFGPAIAQTRTKTHAR 175
The following BLAST results are available for this feature:
BLAST of Gvermi12280.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3J347_9FLOR1.470e-5764.94Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 85..99
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 74..104
IPR001005SANT/Myb domainCDDcd00167SANTcoord: 107..153
e-value: 7.60139E-4
score: 34.0882

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_3404contigScGOVlb_3404:4085616..4086140 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi12280.t1Gvermi12280.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_3404 4085616..4086140 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi12280.t1 ID=Gvermi12280.t1|Name=Gvermi12280.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=175bp
MSRQGGQQADSSDAGDFAEDFAVLEARCDALRVPLPLSASPPCTARPGPV
PLDAFSAEVLSFFLPAHAVESDAVDPTASVKRTAERPARASDGKPKGVKR
QKRFVSNWTPDMDKIVRKSLSKFGWGCWARIAASGKLPKEYTAKMIANRA
KSIGLTKNMFGPAVASTRTKAQSR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001005SANT/Myb