Gvermi12263.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi12263.t1
Unique NameGvermi12263.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length272
Homology
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BLAST of Gvermi12263.t1 vs. uniprot
Match: A0A2V3J117_9FLOR (DUF1995 domain-containing protein n=2 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J117_9FLOR)

HSP 1 Score: 334 bits (857), Expect = 9.570e-113
Identity = 167/265 (63.02%), Postives = 208/265 (78.49%), Query Frame = 0 
Query:    2 KSNYLTAFAVHCSSVPTGVPSNAKAAASQIRQSIRTALITGRRRVCVDMLLAAIDPRSRTFDDKAAEVVFHALVESMQPILKDSQPSVQVVVSGSSAALRVRKWLSRSEFHGVSVDVLGAEDRSKPHSVLVMDPPTGRGVLQLRELLRDAHKKESHVVIHNQPREDSLYKLLGFGGYLPVEMMMYESAFVMAPFALQDPEGTPSGRYVVLRQYPGAWQLWQYCGEESPVLAVGNARSEDGGSYKLCQEFKRRPGSEELIQTIINV 266
            +  +  AF V CS+VP GVPSNAK+AASQIRQS+RTALI+G RRVCVD+LLAA+DPR+R FD+ AAEVVF+ALV+S+QP+L +S   VQVVV GS+AALR +KWL+RSE  GV VDV+GAE+     SVLV+DPPT  GVL+ R  LR+AH + + VV+HN PR+DSLYKLLGFGGYLP EMM YESAF++APF LQ  EG  + R+V++R++P AWQLW++ GEE   L    + + D GSYKLCQEFK +PG +ELIQ I NV
Sbjct:    7 RPRHAFAFPVLCSTVPQGVPSNAKSAASQIRQSVRTALISGHRRVCVDVLLAAVDPRARLFDEDAAEVVFNALVQSVQPVLPESTELVQVVVPGSAAALRAQKWLARSELKGVVVDVIGAEEHRDASSVLVIDPPTESGVLEFRRFLREAHARGAQVVVHNHPRDDSLYKLLGFGGYLPFEMMRYESAFMLAPFTLQATEGGSNCRFVIMRRFPSAWQLWRHLGEERSFLQEDGS-TFDTGSYKLCQEFKDQPGGDELIQAITNV 270
The following BLAST results are available for this feature:
BLAST of Gvermi12263.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3J117_9FLOR9.570e-11363.02DUF1995 domain-containing protein n=2 Tax=Gracilar... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018962Domain of unknown function DUF1995PFAMPF09353DUF1995coord: 21..259
e-value: 4.0E-11
score: 43.4
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..14
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..26
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 27..271
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..26

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_3404contigScGOVlb_3404:4029166..4029981 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi12263.t1Gvermi12263.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_3404 4029166..4029981 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi12263.t1 ID=Gvermi12263.t1|Name=Gvermi12263.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=272bp
MKSNYLTAFAVHCSSVPTGVPSNAKAAASQIRQSIRTALITGRRRVCVDM
LLAAIDPRSRTFDDKAAEVVFHALVESMQPILKDSQPSVQVVVSGSSAAL
RVRKWLSRSEFHGVSVDVLGAEDRSKPHSVLVMDPPTGRGVLQLRELLRD
AHKKESHVVIHNQPREDSLYKLLGFGGYLPVEMMMYESAFVMAPFALQDP
EGTPSGRYVVLRQYPGAWQLWQYCGEESPVLAVGNARSEDGGSYKLCQEF
KRRPGSEELIQTIINVGRGGS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018962DUF1995