Gvermi12258.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi12258.t1
Unique NameGvermi12258.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length108
Homology
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BLAST of Gvermi12258.t1 vs. uniprot
Match: A0A2V3J2I2_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J2I2_9FLOR)

HSP 1 Score: 119 bits (297), Expect = 7.140e-33
Identity = 63/92 (68.48%), Postives = 68/92 (73.91%), Query Frame = 0 
Query:    1 MDNHPTPQENPNIPVAQPLGTPQAPAAAAGPPGDNASDRRSTRSQLQVNFITPVENPERIPRDASLAERLRGRLDEYRSQLNAPQAVPQTTI 92
            MDN P  QE    PVAQPL TPQA A A GP GDNASDR+ T S  QVN +TPV+NPE I R+ASLAERLRGRLD+YRS LN PQA P  TI
Sbjct:    1 MDNQPPVQEESRTPVAQPLETPQASATANGPSGDNASDRQCTGSLPQVNLLTPVDNPEDIARNASLAERLRGRLDKYRSHLNKPQAGPPNTI 92
The following BLAST results are available for this feature:
BLAST of Gvermi12258.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3J2I2_9FLOR7.140e-3368.48Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..47
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..17

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_3404contigScGOVlb_3404:4009884..4010207 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi12258.t1Gvermi12258.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_3404 4009884..4010207 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi12258.t1 ID=Gvermi12258.t1|Name=Gvermi12258.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=108bp
MDNHPTPQENPNIPVAQPLGTPQAPAAAAGPPGDNASDRRSTRSQLQVNF
ITPVENPERIPRDASLAERLRGRLDEYRSQLNAPQAVPQTTIGTVASVTT
DGIADLL*
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