Gvermi12241.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi12241.t1
Unique NameGvermi12241.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length115
Homology
BLAST of Gvermi12241.t1 vs. uniprot
Match: A0A2V3J1D5_9FLOR (LYR motif-containing protein 1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J1D5_9FLOR)

HSP 1 Score: 187 bits (475), Expect = 1.480e-59
Identity = 93/114 (81.58%), Postives = 104/114 (91.23%), Query Frame = 0
Query:    1 MKYRHQVLSLYRRALRIAKSWEEPSERSYIVNEARTLVRRNKDIKSEDKIAEKVQEFEARITTGVHYKIPYPRPTNVAPGATGKDPEVITPVYLDSYKQSQNANRKAAREKPEY 114
            MKYR QVLSLYRRALR++++W EPSERSYI NEARTLVR N++I+S D IAEKVQEFEAR+TTGVHY+IPYPRPTNV PGATGKDPEVITPVYL+SY+Q QN NRK AREKPEY
Sbjct:    1 MKYRKQVLSLYRRALRLSRTWAEPSERSYIANEARTLVRSNRNIQSLDVIAEKVQEFEARLTTGVHYQIPYPRPTNVVPGATGKDPEVITPVYLNSYQQVQNMNRKTAREKPEY 114          
BLAST of Gvermi12241.t1 vs. uniprot
Match: R7Q9Q3_CHOCR (Complex1_LYR_dom domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q9Q3_CHOCR)

HSP 1 Score: 129 bits (324), Expect = 1.830e-36
Identity = 64/111 (57.66%), Postives = 84/111 (75.68%), Query Frame = 0
Query:    1 MKYRHQVLSLYRRALRIAKSWEEPSERSYIVNEARTLVRRNKDIKSEDKIAEKVQEFEARITTGVHYKIPYPRPTNVAPGATGKDPEVITPVYLDSYKQ---SQNANRKAA 108
            + +R ++LS+YR  LR++++WE  SER YI +E RTLVR+NK +    +I  KV EFE RI TG+HYKIPYPRP NVAPGATGKDPE +TPVYL SYK+   S+++ R+ A
Sbjct:    6 VSHRAKILSMYRDVLRLSRTWERSSERQYIRDEVRTLVRKNKFLTDSKEIDFKVHEFETRIETGIHYKIPYPRPVNVAPGATGKDPETVTPVYLHSYKEGTASESSPRRKA 116          
BLAST of Gvermi12241.t1 vs. uniprot
Match: M2XZ60_GALSU (LYR motif-containing protein 1 n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XZ60_GALSU)

HSP 1 Score: 99.4 bits (246), Expect = 2.680e-24
Identity = 49/94 (52.13%), Postives = 64/94 (68.09%), Query Frame = 0
Query:    4 RHQVLSLYRRALRIAKSWEEPSERSYIVNEARTLVRRNKDIKSEDKIAEKVQEFEARITTGVHYKIPYPRPTNVAPGATGKDPEVITPVYLDSY 97
            + QVL LYR  LR+AK+W+EP E  YI  EA  L  +NK I  +++I EK+ E   R+  G+HYKIPYPRP +V PGATGK  ++I P Y+ SY
Sbjct:   12 KRQVLRLYRDILRVAKNWKEPEEAQYIREEADRLFHQNKTITGKEEIEEKLFEGRTRLELGIHYKIPYPRPYHVVPGATGKTRDMIKPAYMASY 105          
BLAST of Gvermi12241.t1 vs. uniprot
Match: A0A444ST16_ARMVU (LYR motif-containing protein 1 n=1 Tax=Armadillidium vulgare TaxID=13347 RepID=A0A444ST16_ARMVU)

HSP 1 Score: 85.1 bits (209), Expect = 3.990e-19
Identity = 48/110 (43.64%), Postives = 67/110 (60.91%), Query Frame = 0
Query:    1 MKYRHQVLSLYRRALRIAKSWE--EPS----ERSYIVNEARTLVRRNKDIKSEDKIAEKVQEFEARITTGVHYKIPYPRPTNVAPGATGKDPEVIT--------PVYLDS 96
            ++ R +VLSLY+R LR++ +WE  EPS    ER YI  EARTL R+NKD+  E +I + +   EAR+  G+HY++PYPRP N+ P    K   ++         PVYL S
Sbjct:    3 VQIRREVLSLYKRILRLSLTWEAKEPSKTKEERIYIRTEARTLFRKNKDVSDEREIRDMLTGAEARVEMGIHYRLPYPRPVNLPPNVLAKQKGIVNIRRLEKSRPVYLKS 112          
BLAST of Gvermi12241.t1 vs. uniprot
Match: UPI0007402EC9 (LYR motif-containing protein 1 isoform X1 n=1 Tax=Lepisosteus oculatus TaxID=7918 RepID=UPI0007402EC9)

HSP 1 Score: 83.2 bits (204), Expect = 2.880e-18
Identity = 50/116 (43.10%), Postives = 67/116 (57.76%), Query Frame = 0
Query:    4 RHQVLSLYRRALRIAKSWEEPS--------ERSYIVNEARTLVRRNKDIKSEDKIAEKVQEFEARITTGVHYKIPYPRPTNVAP-----------GATGKDPEVITPVYLDSYKQS 100
            R +VLSLYRR LRIA+SW+  S        ERSYI  EARTL R+NK I   + I + ++E  ARI  G+HY+IPYPRPT + P            A  +  +   P+YL S+ ++
Sbjct:    7 RQEVLSLYRRVLRIARSWQAQSGLSQDTSTERSYITQEARTLFRQNKQITDGESIKKCIEECHARIEMGLHYRIPYPRPTYLPPMGLATQRGRRLRAQERRRKQAQPIYLQSHDET 122          
BLAST of Gvermi12241.t1 vs. uniprot
Match: W5MMR8_LEPOC (LYR motif containing 1 n=2 Tax=Lepisosteus oculatus TaxID=7918 RepID=W5MMR8_LEPOC)

HSP 1 Score: 83.2 bits (204), Expect = 6.770e-18
Identity = 50/116 (43.10%), Postives = 67/116 (57.76%), Query Frame = 0
Query:    4 RHQVLSLYRRALRIAKSWEEPS--------ERSYIVNEARTLVRRNKDIKSEDKIAEKVQEFEARITTGVHYKIPYPRPTNVAP-----------GATGKDPEVITPVYLDSYKQS 100
            R +VLSLYRR LRIA+SW+  S        ERSYI  EARTL R+NK I   + I + ++E  ARI  G+HY+IPYPRPT + P            A  +  +   P+YL S+ ++
Sbjct:   41 RQEVLSLYRRVLRIARSWQAQSGLSQDTSTERSYITQEARTLFRQNKQITDGESIKKCIEECHARIEMGLHYRIPYPRPTYLPPMGLATQRGRRLRAQERRRKQAQPIYLQSHDET 156          
BLAST of Gvermi12241.t1 vs. uniprot
Match: A0A5N5SLX9_9CRUS (LYR motif-containing protein 1 n=1 Tax=Armadillidium nasatum TaxID=96803 RepID=A0A5N5SLX9_9CRUS)

HSP 1 Score: 81.3 bits (199), Expect = 8.690e-18
Identity = 43/85 (50.59%), Postives = 59/85 (69.41%), Query Frame = 0
Query:    1 MKYRHQVLSLYRRALRIAKSWE--EPS----ERSYIVNEARTLVRRNKDIKSEDKIAEKVQEFEARITTGVHYKIPYPRPTNVAP 79
            ++ R +VLSLY+R LR++ +WE  EPS    ER YI  EARTL R+NKD+  E +I E +   EAR+  G+HY++PYPRP N+ P
Sbjct:    3 LQIRREVLSLYKRILRLSLTWEAKEPSKTKEERIYIRTEARTLFRKNKDVSDEREIREMLTGTEARVEMGIHYRLPYPRPVNLPP 87          
BLAST of Gvermi12241.t1 vs. uniprot
Match: A0A7K4XJK4_REGSA (LYRM1 protein (Fragment) n=3 Tax=Passeriformes TaxID=9126 RepID=A0A7K4XJK4_REGSA)

HSP 1 Score: 81.3 bits (199), Expect = 1.600e-17
Identity = 49/115 (42.61%), Postives = 66/115 (57.39%), Query Frame = 0
Query:    4 RHQVLSLYRRALRIAKSWEEPS--------ERSYIVNEARTLVRRNKDIKSEDKIAEKVQEFEARITTGVHYKIPYPRPTNVAP-------GATGKDPE----VITPVYLDSYKQ 99
            R +VL LYR+ LRIAKSW+  S        E+ YI NEARTL R+NK +     I + ++E EARI  G+HY IPYPRP ++ P       G T +  E    +  P+YL S+ +
Sbjct:    6 RQEVLGLYRKVLRIAKSWQSTSGQVEETMREKEYIRNEARTLFRKNKSVTDPKLIKQCIEECEARIEIGLHYNIPYPRPIHLPPMSLAHKQGRTLRQQEKLRKISKPIYLKSHDE 120          
BLAST of Gvermi12241.t1 vs. uniprot
Match: UPI001B88C9B0 (LYR motif-containing protein 1-like n=1 Tax=Gigantopelta aegis TaxID=1735272 RepID=UPI001B88C9B0)

HSP 1 Score: 80.1 bits (196), Expect = 4.520e-17
Identity = 46/116 (39.66%), Postives = 65/116 (56.03%), Query Frame = 0
Query:    4 RHQVLSLYRRALRIAKSWEEPS--------ERSYIVNEARTLVRRNKDIKSEDKIAEKVQEFEARITTGVHYKIPYPRPTNVAPGATGKDPEVIT-----------PVYLDSYKQS 100
            +  VLSLYRR  R+AKSW+  S        ER YI++EAR+L R+NK++ + D+I E ++E EARI   +HYK P+PRP N+           +T           P+YL SY  +
Sbjct:    5 KQHVLSLYRRIFRLAKSWQAMSGDVAETNIERKYIISEARSLFRKNKEVTNNDEIKEFIREAEARIELALHYKNPFPRPMNIPQSTLPFTGHAMTKSQKTAMKRAKPIYLKSYNDA 120          
BLAST of Gvermi12241.t1 vs. uniprot
Match: A0A8C2W9D0_CHILA (LYR motif containing 1 n=2 Tax=Chinchilla lanigera TaxID=34839 RepID=A0A8C2W9D0_CHILA)

HSP 1 Score: 79.7 bits (195), Expect = 6.400e-17
Identity = 48/115 (41.74%), Postives = 65/115 (56.52%), Query Frame = 0
Query:    4 RHQVLSLYRRALRIAKSWEEPS--------ERSYIVNEARTLVRRNKDIKSEDKIAEKVQEFEARITTGVHYKIPYPRPTNVAP-----------GATGKDPEVITPVYLDSYKQ 99
            R +VLSLYRR  R+A+ W   S        E+ YI+NEARTL R+NK++   D I + + E  ARI  G+HYKIPYPRP ++ P            A  K  ++  PVYL S+ +
Sbjct:    6 RREVLSLYRRIFRLARKWHAASGQTEDTIKEKQYILNEARTLFRKNKNLTDTDLIKQYIDECTARIEIGLHYKIPYPRPIHLPPMGLTPLQARGLRAQEKLRKLSRPVYLKSHDE 120          
The following BLAST results are available for this feature:
BLAST of Gvermi12241.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J1D5_9FLOR1.480e-5981.58LYR motif-containing protein 1 n=1 Tax=Gracilariop... [more]
R7Q9Q3_CHOCR1.830e-3657.66Complex1_LYR_dom domain-containing protein n=1 Tax... [more]
M2XZ60_GALSU2.680e-2452.13LYR motif-containing protein 1 n=1 Tax=Galdieria s... [more]
A0A444ST16_ARMVU3.990e-1943.64LYR motif-containing protein 1 n=1 Tax=Armadillidi... [more]
UPI0007402EC92.880e-1843.10LYR motif-containing protein 1 isoform X1 n=1 Tax=... [more]
W5MMR8_LEPOC6.770e-1843.10LYR motif containing 1 n=2 Tax=Lepisosteus oculatu... [more]
A0A5N5SLX9_9CRUS8.690e-1850.59LYR motif-containing protein 1 n=1 Tax=Armadillidi... [more]
A0A7K4XJK4_REGSA1.600e-1742.61LYRM1 protein (Fragment) n=3 Tax=Passeriformes Tax... [more]
UPI001B88C9B04.520e-1739.66LYR motif-containing protein 1-like n=1 Tax=Gigant... [more]
A0A8C2W9D0_CHILA6.400e-1741.74LYR motif containing 1 n=2 Tax=Chinchilla lanigera... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008011Complex 1 LYR protein domainPFAMPF05347Complex1_LYRcoord: 5..56
e-value: 1.3E-12
score: 47.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 93..114
IPR040330LYR motif-containing protein 1PANTHERPTHR14273LYR MOTIF-CONTAINING PROTEIN 1coord: 2..106
IPR045294LYRM1, LYR domainCDDcd20261Complex1_LYR_LYRM1coord: 6..73
e-value: 6.41743E-27
score: 92.6896

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_3404contigScGOVlb_3404:3957047..3957520 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi12241.t1Gvermi12241.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_3404 3957047..3957520 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi12241.t1 ID=Gvermi12241.t1|Name=Gvermi12241.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=115bp
MKYRHQVLSLYRRALRIAKSWEEPSERSYIVNEARTLVRRNKDIKSEDKI
AEKVQEFEARITTGVHYKIPYPRPTNVAPGATGKDPEVITPVYLDSYKQS
QNANRKAAREKPEY*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008011Complex1_LYR_dom
IPR040330LYRM1
IPR045294Complex1_LYR_LYRM1