Gvermi12240.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi12240.t1
Unique NameGvermi12240.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length259
Homology
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BLAST of Gvermi12240.t1 vs. uniprot
Match: A0A2V3J024_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J024_9FLOR)

HSP 1 Score: 237 bits (604), Expect = 1.350e-74
Identity = 142/274 (51.82%), Postives = 190/274 (69.34%), Query Frame = 0 
Query:    1 MSIHRFAALSVRAALSANSRTKVLRSGTGQGTMEMLTSVMNRRLSAVQPAPSTPQA----PRNDTGSK------PSQSLEKKELEEKEVEKSPEPSTNKIPDIPSNSWSSIGFEPEDANDPNKWKKFAWKYVGAVLLFFVSYKTLHWYVDRIEEEGKQKKKNLEESREFSNELKQSGSSTMGVSSM------FQNIEQNAELKKMMESVAEGGGGQTSSELEELYRYRDELDARLRDLRKQGRNSEIDAEKKDIKLELSALSEEISILERKNKS 258
            M+I R   + +RAA +A  R ++ R     G +  LT+++  R  A QPAPS P      P++++ S+      P    +K    +K  E + EP+  KIPDIPSNSW+SIGFEP+D NDP+KWKKFAWKY GAVL+FF+SYKTLHWYVDRIEEEGKQ+KK +EE+REFS+E+K+ GSS +G S +       +  EQ+A+L KM+++  E    QTSSEL+ELYRYR EL+ +LRDLRK+GR  EIDAEKK++KL+L  L+++I  LE K KS
Sbjct:    1 MNIGRLTTVGLRAATAAGLRRQITRDVVN-GNVTRLTALLQSRYCAAQPAPSRPPRTNDNPQSESTSQAKLSPQPETRTDKDSSIDKPAETATEPAA-KIPDIPSNSWTSIGFEPQDENDPHKWKKFAWKYAGAVLVFFISYKTLHWYVDRIEEEGKQQKKGMEEAREFSDEMKKQGSSPLGASILPDGSKELRRDEQHADLLKMLDTAKENEI-QTSSELDELYRYRGELEEKLRDLRKRGRTPEIDAEKKEVKLDLKELTKDIHALEAKKKS 271
The following BLAST results are available for this feature:
BLAST of Gvermi12240.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3J024_9FLOR1.350e-7451.82Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 205..225
NoneNo IPR availableCOILSCoilCoilcoord: 228..255
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 38..64
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 38..104
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 153..177
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 162..177
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 88..103
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 65..85
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 18..25
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..25
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 26..258

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_3404contigScGOVlb_3404:3955435..3956211 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi12240.t1Gvermi12240.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_3404 3955435..3956211 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi12240.t1 ID=Gvermi12240.t1|Name=Gvermi12240.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=259bp
MSIHRFAALSVRAALSANSRTKVLRSGTGQGTMEMLTSVMNRRLSAVQPA
PSTPQAPRNDTGSKPSQSLEKKELEEKEVEKSPEPSTNKIPDIPSNSWSS
IGFEPEDANDPNKWKKFAWKYVGAVLLFFVSYKTLHWYVDRIEEEGKQKK
KNLEESREFSNELKQSGSSTMGVSSMFQNIEQNAELKKMMESVAEGGGGQ
TSSELEELYRYRDELDARLRDLRKQGRNSEIDAEKKDIKLELSALSEEIS
ILERKNKS*
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