Gvermi12227.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi12227.t1
Unique NameGvermi12227.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length1256
Homology
BLAST of Gvermi12227.t1 vs. uniprot
Match: A0A2V3J2X9_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J2X9_9FLOR)

HSP 1 Score: 177 bits (450), Expect = 1.330e-41
Identity = 215/798 (26.94%), Postives = 321/798 (40.23%), Query Frame = 0
Query:    1 MSRTHHNSLRRSLSWDAWQQHDAFDEQLSTPAIQNALARARTQLRPIFTQHARFAEDGGLPTVPLSFLLANLRRAHIIPPLTSHNYQLGLQLCISPDLHSPPH-SPSKNHSNQRIHFDTFLQAFAFSIFCYPIEHCSAAISSASLSLDDQLLAQCFANDLGTALYRFVDSCRESSE----HNLGTLHQFQANAAENGSLSSSVSTVPKSELERQNIQEQDTGHRIHTQRCEDQPTTTPLKHSEP---HQSQMTFRDQQTGPQRGVPRLSGRGSSNPVTPERFYTPRCNFPAASPRR-LPAHTFASSPAPRQWFTPRHSVAKMSPDVMRQPTAFSANSLGIQTAANLEMSNLLDTEHDLVSACGENIVSLADSPRADEALPVEYEGGSSDIILLDEVQGSEKDAPSSPASHFQSPEISD----------RVSCHAQLSPDDGRKLTFFDTDDEGNLSDDSSRYES---DGERSTPALMLSQVEMFGKEIEEPGESTDLEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAINVQIDDIVTQTEPDTKGSVCDGKPSDSESVCAEGGDGERNSENQPESEDNTASEIDVCLKRTSMSPAALFDEKTGFVSHDPS-------FDFESVLRMNATSPGRSDNCRSDIGFDSLGECEQAELLYSCGNVSDSSELSMRTRETYSRLLDSYIETGSFGNNLVSSNGFTTDEFTPPAECCLNLESIMEEACQEEEQVDSHVQD 769
            MSRT         + DAW +HD F  QL  P +QN LA  +  L PIF ++A F E+ G+PTVPL+FL+  L ++ ++P L SHN++LGLQL IS DL SP H SPSK++S QRI FDTF+ AFAFS+F YP +      S++S + ++   A  FA  L        +S + SS+     N  TL+  +       S   S  + PK E   + I EQ T  +   +   +Q   +P+   +    H S  T RD  T  +  +       SS P TP +++TPR +    +P +   + +FASSP    WFTPR  VA+                 G +T  +     LL     L     +      DSPR   +   ++E  S        VQ  +K           S + S+            +C +  +     K     +  E  +S ++  + S   DG+   P++  S      +  E P +   +                                                                                                N++  +I ++      GS+ + +  +S+    EG    RN     E +D++     V  + T         +++  +   P        F+ E  L  + +SP +S   R+D G DSLGE E  ELL++ G+ SDSS+LSMRTRETYSR+LD YIE G+F +  + S  +   +    AE   N ES    A   EEQV  H  D
Sbjct:    1 MSRTERTPRAPDSTPDAWTRHDEFHRQLDAPQVQNVLAIVKPHLHPIFLENALFCEETGMPTVPLNFLVEILEQSALVPRLPSHNFKLGLQLAISHDLSSPLHDSPSKHYSEQRIQFDTFVNAFAFSLFSYPFQLPQVDDSTSSQAQENPQDANSFATSLRLGAKHLSESVQSSSKAGASENTNTLYLKEM------SKDPSAFSPPKPESLLEGI-EQVTDLQTTKETILEQDPQSPIIQDDECSLHDSS-TVRDDNTESE-SIGTFDTE-SSAPPTPAQYFTPRAHLEKPTPHKTFTSSSFASSPKNFAWFTPRQGVAE-----------------GSRTTPSNRFRRLL-----LTGERKKKQTPFKDSPRPRASEEFQFENNSQRDKEESPVQPMQKAGSGMAIDVTHSKQESEVGVETVRNVQDTTCASSSTHSSQEKSV---SSPERKVSVENLEHTSSGIDGDSLEPSIQKSTKNTSPQGDEIPSQRFSISSNLASPSLPSPSSQFQSPEIRDTFTTVQQSSLEDPSSSRRLSFSDSEDGSNSLDESSPYETDEERSTPEMKLSQASNYGQ---------------NIEEPEIASEL-----GSLAESERGESDVHREEGHIESRNF--VQEVDDHSPQNPSV--ENTYHLETGFLSDRSDSIHPTPRAALMGTLFNGEGSLFGDYSSPSKSQLGRNDFGLDSLGEDEPTELLFNNGDQSDSSDLSMRTRETYSRMLDFYIENGNFRSK-IDSVTYVEGQAILHAEGDDNSES-ENAAADPEEQVPVHSGD 737          
The following BLAST results are available for this feature:
BLAST of Gvermi12227.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3J2X9_9FLOR1.330e-4126.94Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 226..266
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 916..938
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 952..1023
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 387..452
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 208..225
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 504..536
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 485..503
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 424..446
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 467..545
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1024..1039
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 393..411
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1075..1097
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 193..266
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 193..207
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 570..625
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 841..884
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 467..483
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1075..1095
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 916..1039
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1242..1255
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 1223..1241
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..1222
NoneNo IPR availableTMHMMTMhelixcoord: 1224..1241

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_3404contigScGOVlb_3404:3908575..3912342 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi12227.t1Gvermi12227.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_3404 3908575..3912342 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi12227.t1 ID=Gvermi12227.t1|Name=Gvermi12227.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=1256bp
MSRTHHNSLRRSLSWDAWQQHDAFDEQLSTPAIQNALARARTQLRPIFTQ
HARFAEDGGLPTVPLSFLLANLRRAHIIPPLTSHNYQLGLQLCISPDLHS
PPHSPSKNHSNQRIHFDTFLQAFAFSIFCYPIEHCSAAISSASLSLDDQL
LAQCFANDLGTALYRFVDSCRESSEHNLGTLHQFQANAAENGSLSSSVST
VPKSELERQNIQEQDTGHRIHTQRCEDQPTTTPLKHSEPHQSQMTFRDQQ
TGPQRGVPRLSGRGSSNPVTPERFYTPRCNFPAASPRRLPAHTFASSPAP
RQWFTPRHSVAKMSPDVMRQPTAFSANSLGIQTAANLEMSNLLDTEHDLV
SACGENIVSLADSPRADEALPVEYEGGSSDIILLDEVQGSEKDAPSSPAS
HFQSPEISDRVSCHAQLSPDDGRKLTFFDTDDEGNLSDDSSRYESDGERS
TPALMLSQVEMFGKEIEEPGESTDLEGEDIKDPSESTAFSAQEIETPDES
ISFESQEPEARDELIAFECREINAPEESKGFDSQEIETPEESIAFESQEI
EALDDSVPFDGQEMEELRDAINVQIDDIVTQTEPDTKGSVCDGKPSDSES
VCAEGGDGERNSENQPESEDNTASEIDVCLKRTSMSPAALFDEKTGFVSH
DPSFDFESVLRMNATSPGRSDNCRSDIGFDSLGECEQAELLYSCGNVSDS
SELSMRTRETYSRLLDSYIETGSFGNNLVSSNGFTTDEFTPPAECCLNLE
SIMEEACQEEEQVDSHVQDPLSSHAVPEHMLLHRIQEVHDEESSHADEQI
LSHGSVEVLEEENSHHHEHTLSNTSVQVHREEITHPDEHMLSNTSVQVHR
EEITHPDEHMLSNTPVQVHREENTHPDDHIPSNTPVQVHREENTHPDEHI
LSNTLVQVHREEITHPDEHMLSNTSVHVHEKENSHPHEHMLSNTSVHIYG
YENPHPDEHLESNRSAEVHGEENSYPDEHTLPNRSVEVRQEDNSNPDYQR
GTENDPQDFERSVEDKHTTDTISHTPSKSETETVGNDTAVAHSRSIDACC
EEIVDPHACAPLHDKDVITSNQRVLQPDETSATSAVPSKDALQNATAELS
PEDFDVIHKPVKTLVSFDLFSSSPLGSVCTKTSEDQRESILRTRVLSPAH
RKPRDADQTSVRIAARDKFELSQPTIVVRCNGHDTESHILAALRENTELC
RMLREEVELRRRSDSICSRIRNMLEWMIIVGILVSVVFVVLDNWMARVRF
TNVLM*
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