Gvermi12223.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male
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Overview
Homology
BLAST of Gvermi12223.t1 vs. uniprot
Match: A0A2V3J003_9FLOR (Putative RNA-binding protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J003_9FLOR) HSP 1 Score: 341 bits (875), Expect = 1.960e-113 Identity = 191/294 (64.97%), Postives = 221/294 (75.17%), Query Frame = 0
Query: 71 SPQVVINKDITESKLKLLQQSPLRRLIPEADRKAAAAQLQAKRRQKSKSPQKPAHPESSNEAAQSKPPKAHMAKTRAQQPVSEHEHSDPENVHNEGASLTKTEARQNLDDLKLGVAKKKEARKMRWKARQLRKDGKLVKPDKDVDPGVLYLGHIPHGFYEKEMRSYFSQFGEVLRVRLSRSVKTGRSRGYAFIEFAHKDVAQIAADAMDGYLMHRQKLVARFVPPEKVHEKTFKGANRTFRQIPWARIERRNMLNRASDPLKLAARSKRILKSAKRKRASLVRQGLTHTFLELP 364
SPQ+VIN +ITESKLKLL++SPLRRLIPE DRKAAAAQL A RR +SK+ S + A ++P A AK + P + AR++LD LKLG+ KKKEAR+MRWK R+LRKDGKL D D DPGV+YL HIPHGF+EKE+ +YFSQFG VLRVRLSRSVKT RSRGYAF+EFA K VAQIAADAMDGYLMHRQKLVA+FVP EKVH TFKGANR FRQIPW+RIERR M+ RA DP+KLAARSK IL++A+R++ LV QGLTHT LELP
Sbjct: 40 SPQIVINPEITESKLKLLEKSPLRRLIPEKDRKAAAAQLIANRRNQSKT---------SQQTASAQPQTA--AKPKPNPPAK-----------------GRNGARKDLDKLKLGIVKKKEARRMRWKVRELRKDGKLPHNDSDTDPGVMYLAHIPHGFFEKEITAYFSQFGPVLRVRLSRSVKTARSRGYAFVEFADKQVAQIAADAMDGYLMHRQKLVAKFVPAEKVHPDTFKGANRNFRQIPWSRIERRAMIARAKDPVKLAARSKNILRAARRRQRVLVEQGLTHTLLELP 305
BLAST of Gvermi12223.t1 vs. uniprot
Match: R7Q752_CHOCR (RRM domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q752_CHOCR) HSP 1 Score: 202 bits (514), Expect = 3.080e-57 Identity = 124/295 (42.03%), Postives = 172/295 (58.31%), Query Frame = 0
Query: 71 SPQVVINKDITESKLKLLQQSPLRRLIPEADRKAAAAQLQAKRRQKSKSPQKPAHPESSNEAAQSKPPKAHMAKTRAQQPVSEHEHSDPENVHNEGASLTKTEARQNLDDLKLGVAKKKEARKMRWKARQLRKDGKLVKPDKDVDPGVLYLGHIPHGFYEKEMRSYFSQFGEVLRVRLSRSVKTGRSRGYAFIEFAHKDVAQIAADAMDGYLMHRQKLVARFVPPEKVHEKTFKGANRTFRQIPWARIERRNMLNRASDPLKLAARSKRILKSAKRKRASLVRQGLTHTFLELPS 365
SP VV+N+ +T+ KL LL +SPL L+ E D+ AAA Q+ + S H+ + V E D ++ +A + DL VA++KE R + + R+LRK G + + GV+YLGHIPHGFYE+E+R YF+QFG V VRLSRS KT RSRGYAFIEF ++AQ AA++MDGYLMH QKLVA+ VPPE++H +T KGA R F+++ ++ + R ++ R+ DPLKLA RSK + K K+A L + GL + F E+ S
Sbjct: 196 SPDVVLNRRMTKDKLSLLTRSPLSHLVSEEDKDAAAQQVYGQGASFS----------------------THVKRKLQNADVDEIIPLDS----SQPPKKKSKDANADAKDLAELVARRKERRIEKRRLRKLRKSGAREEESTPTESGVMYLGHIPHGFYEEEIRGYFAQFGRVTAVRLSRSKKTARSRGYAFIEFEDTEIAQKAAESMDGYLMHGQKLVAKVVPPERLHPETMKGAERKFKKVKFSTVMRNGLIRRSRDPLKLAQRSKHVQKKLHGKKARLEKMGLKYQFPEIAS 464
BLAST of Gvermi12223.t1 vs. uniprot
Match: A0A836BMG7_9CHLO (RRM domain-containing protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A836BMG7_9CHLO) HSP 1 Score: 157 bits (396), Expect = 5.220e-43 Identity = 76/150 (50.67%), Postives = 104/150 (69.33%), Query Frame = 0
Query: 211 DKDVDPGVLYLGHIPHGFYEKEMRSYFSQFGEVLRVRLSRSVKTGRSRGYAFIEFAHKDVAQIAADAMDGYLMHRQKLVARFVPPEKVHEKTFKGANRTFRQIPWARIERRNMLNRASDPLKLAARSKRILKSAKRKRASLVRQGLTHTF 360
D + VLYLGH+PHGFYEKEM YFSQFG+V RVRLSRS +TG++RGYAF+EF H +VA +AA+AMDGY + +Q+L + +PP KVH F GANR F+ IPW ++ER +R P + AAR ++++ K + A + GL + +
Sbjct: 23 DGNAQARVLYLGHLPHGFYEKEMLGYFSQFGKVTRVRLSRSKRTGKARGYAFVEFMHPEVASVAAEAMDGYFLFKQRLSVKLLPPAKVHPLLFNGANRKFKVIPWRKVER-GRHDRERSPAEHAARIAKLIRRDKARAARIAEAGLEYEY 171
BLAST of Gvermi12223.t1 vs. uniprot
Match: A0A2P6TMU9_CHLSO (MKI67 FHA domain-interacting nucleolar phospho n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TMU9_CHLSO) HSP 1 Score: 151 bits (381), Expect = 1.040e-40 Identity = 69/143 (48.25%), Postives = 107/143 (74.83%), Query Frame = 0
Query: 218 VLYLGHIPHGFYEKEMRSYFSQFGEVLRVRLSRSVKTGRSRGYAFIEFAHKDVAQIAADAMDGYLMHRQKLVARFVPPEKVHEKTFKGANRTFRQIPWARIERRNMLNRASDPLKLAARSKRILKSAKRKRASLVRQGLTHTF 360
V+YLGH+PHGFYEK+++ YFSQFG+V +VRLSR+ K+G+S+GYAF+EF+ +VA+IAADAMDGY++ QKL +R +P ++VH FKGANR F+Q+PW +IER NR + R+++ ++ +R++ + + G+ + +
Sbjct: 34 VVYLGHLPHGFYEKQLKEYFSQFGKVTKVRLSRNKKSGKSKGYAFLEFSSAEVAKIAADAMDGYMLFTQKLTSRVLPADEVHPDLFKGANRVFKQVPWQKIERERQ-NRDRTAAEAEKRARQAVERDERRQRRIAQAGIDYQY 175
BLAST of Gvermi12223.t1 vs. uniprot
Match: A0A250XKQ7_9CHLO (RRM domain-containing protein n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250XKQ7_9CHLO) HSP 1 Score: 148 bits (373), Expect = 1.900e-39 Identity = 69/156 (44.23%), Postives = 108/156 (69.23%), Query Frame = 0
Query: 210 PDKDVDPGVLYLGHIPHGFYEKEMRSYFSQFGEVLRVRLSRSVKTGRSRGYAFIEFAHKDVAQIAADAMDGYLMHRQKLVARFVPPEKVHEKTFKGANRTFRQIPWARIERRNMLNRASDPLKLAARSKRILKSAKRKRASLVRQGLTHTFLELPS 365
P V+Y+GH+PHGFYEK++ +FSQFG++ RVRLSRS K+GR++ YAF+EF + +VAQ+AA+AM+GY + QKL + +P +K+H + FKGANR F+ +PW+++ERR ++ P +LA R R +K K ++ ++ G+ + + L S
Sbjct: 30 PSSSEQSRVVYIGHLPHGFYEKQLLGFFSQFGKLTRVRLSRSKKSGRAKHYAFLEFQYPEVAQVAAEAMNGYFLFSQKLDVKLMPVDKIHPELFKGANRRFKNVPWSKLERRRH-DKELTPAELARRVSRAIKKDKERQKKILEAGIEYEYPSLGS 184
BLAST of Gvermi12223.t1 vs. uniprot
Match: D8TQJ3_VOLCA (RRM domain-containing protein n=1 Tax=Volvox carteri f. nagariensis TaxID=3068 RepID=D8TQJ3_VOLCA) HSP 1 Score: 146 bits (368), Expect = 6.900e-39 Identity = 66/139 (47.48%), Postives = 103/139 (74.10%), Query Frame = 0
Query: 218 VLYLGHIPHGFYEKEMRSYFSQFGEVLRVRLSRSVKTGRSRGYAFIEFAHKDVAQIAADAMDGYLMHRQKLVARFVPPEKVHEKTFKGANRTFRQIPWARIERRNMLNRASDPLKLAARSKRILKSAKRKRASLVRQGL 356
V+Y+GH+PHGF+EK+M YFSQFG+V R+RLSRS KTG ++GYAF+EF + +VA++AA+AMDGY + +Q+L + +PP +VH + F+GANR F+ IPW R+ER+ +R P + A R ++++ K+++ + G+
Sbjct: 29 VVYVGHVPHGFFEKQMLGYFSQFGKVTRLRLSRSKKTGNAKGYAFLEFQYPEVARVAAEAMDGYFLFKQRLKCKLIPPSRVHPQLFQGANRRFKVIPWRRVERQRH-DRERTPTEHAQRVAKLVRKDKQRQKKIKEAGI 166
BLAST of Gvermi12223.t1 vs. uniprot
Match: A0A1S8W0N7_9FUNG (RRM domain-containing protein n=1 Tax=Batrachochytrium salamandrivorans TaxID=1357716 RepID=A0A1S8W0N7_9FUNG) HSP 1 Score: 148 bits (374), Expect = 1.260e-37 Identity = 76/161 (47.20%), Postives = 107/161 (66.46%), Query Frame = 0
Query: 200 QLRKDGKLVKPDKDVDPGVLYLGHIPHGFYEKEMRSYFSQFGEVLRVRLSRSVKTGRSRGYAFIEFAHKDVAQIAADAMDGYLMHRQKLVARFVPPEKVHEKTFKGANRTFRQIPWARIERRNMLNRASDPLKLAARSKRILKSAKRKRASLVRQGLTHTF 360
+L+ K V + +PGV+YLGH+PHGFYE EM SYFSQFGEV R+RLSR+ KTGRS+ YAFIEF +VA+I +D M+ YLM Q + + V EK+H TFKG NR F+ +PW +++R+ N+ + +A +KR+ K+ +KR L G+ + F
Sbjct: 190 KLKNSTKKVNSNPKAEPGVVYLGHVPHGFYEAEMMSYFSQFGEVTRLRLSRNKKTGRSKHYAFIEFKDAEVAKIVSDTMNNYLMFNQIIKCKLVAAEKLHVDTFKGCNRKFKVVPWNKVQRQKQ-NKPKTLEQWSANTKRLEKNDVKKRKHLESLGIEYEF 349
BLAST of Gvermi12223.t1 vs. uniprot
Match: A8J450_CHLRE (Predicted protein n=2 Tax=Chlamydomonas TaxID=3052 RepID=A8J450_CHLRE) HSP 1 Score: 142 bits (359), Expect = 1.310e-37 Identity = 69/146 (47.26%), Postives = 101/146 (69.18%), Query Frame = 0
Query: 218 VLYLGHIPHGFYEKEMRSYFSQFGEVLRVRLSRSVKTGRSRGYAFIEFAHKDVAQIAADAMDGYLMHRQKLVARFVPPEKVHEKTFKGANRTFRQIPWARIERRNMLNRASDPLKLAARSKRILKSAKRKRASLVRQGLTHTFLEL 363
V+Y+GHIPHGF+EK+M YFSQFG+V RVRLSRS +TG S+GYAFIEF H +VA++AA+AMDGY + +Q+L + +PP +VH F GANR F+ IP +ER+ + P + AAR ++++ K ++ + G+ + + L
Sbjct: 25 VIYVGHIPHGFFEKQMLGYFSQFGKVTRVRLSRSKRTGNSKGYAFIEFQHPEVARVAAEAMDGYFIFKQRLSCKLMPPARVHPMLFNGANRKFKVIPRRTVERKRH-EKERTPKEQAARIAKLIRRDKLRQKKITEAGIEYEYAGL 169
BLAST of Gvermi12223.t1 vs. uniprot
Match: A0A7S0KGS0_MICPS (Hypothetical protein n=2 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0KGS0_MICPS) HSP 1 Score: 147 bits (370), Expect = 3.560e-37 Identity = 87/206 (42.23%), Postives = 128/206 (62.14%), Query Frame = 0
Query: 159 PENVHNEGASLTKTEARQNLDDLKLGVAKK---KEARKMRWKARQLRKDGKLVKPDKDVDPGVLYLGHIPHGFYEKEMRSYFSQFGEVLRVRLSRSVKTGRSRGYAFIEFAHKDVAQIAADAMDGYLMHRQKLVARFVPPEKVHEKTFKGANRTFRQIPWAR-IERRNMLNRASDPLKLAARSKRILKSAKRKRASLVRQGLTHTF 360
P+NV G + K E+ D + + VAKK KEA K+R +K +KD P VLY+GH+PHGFYE++MR YFSQFGEV R+RLSR+ KTG+S+ YAF+EF H +VAQI A++M+GYL+ L R + + H + +KGANR F+Q+PW + ++ R++D K ARS +++ +R+R + G+ + F
Sbjct: 104 PKNV---GDDIIKLESDSEGDGIPVPVAKKAAKKEAAKLR------KKIAGAFGREKDERPKVLYIGHVPHGFYEEQMRGYFSQFGEVTRLRLSRNKKTGKSKHYAFVEFKHPEVAQIVAESMNGYLLFESVLKVRTMTEAECHPEMWKGANRKFKQVPWQKKAADQHDRERSADEQK--ARSAALIRGERRRRKKIADAGIEYDF 298
BLAST of Gvermi12223.t1 vs. uniprot
Match: C1E649_MICCC (RRM domain-containing protein (Fragment) n=1 Tax=Micromonas commoda (strain RCC299 / NOUM17 / CCMP2709) TaxID=296587 RepID=C1E649_MICCC) HSP 1 Score: 140 bits (353), Expect = 3.860e-37 Identity = 70/150 (46.67%), Postives = 103/150 (68.67%), Query Frame = 0
Query: 212 KDVDPGVLYLGHIPHGFYEKEMRSYFSQFGEVLRVRLSRSVKTGRSRGYAFIEFAHKDVAQIAADAMDGYLMHRQKLVARFVPPEKVHEKTFKGANRTFRQIPWAR-IERRNMLNRASDPLKLAARSKRILKSAKRKRASLVRQGLTHTF 360
KD P VLY+GH+PHGFYE++MR YFSQFGEV R+RLSR+ KTG+S+ YAF+EF H +VAQI A++M+GYL+ L R + + H + +KGANR F+Q+PW + ++ R++D K AR+ +L+ +R+R + G+ + F
Sbjct: 1 KDERPKVLYIGHVPHGFYEEQMRGYFSQFGEVTRLRLSRNKKTGKSKHYAFVEFKHPEVAQIVAESMNGYLLFESVLKVRTMTEAECHPEMWKGANRKFKQVPWQKKAATQHDRERSADEQK--ARNSALLRGERRRRKKIADAGIEYDF 148 The following BLAST results are available for this feature:
BLAST of Gvermi12223.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Gvermi12223.t1 ID=Gvermi12223.t1|Name=Gvermi12223.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=368bpback to top |