Gvermi12194.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi12194.t1
Unique NameGvermi12194.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length81
Homology
BLAST of Gvermi12194.t1 vs. uniprot
Match: A0A2V3IY86_9FLOR (COX assembly mitochondrial protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IY86_9FLOR)

HSP 1 Score: 128 bits (322), Expect = 2.640e-37
Identity = 61/79 (77.22%), Postives = 70/79 (88.61%), Query Frame = 0
Query:    1 MHPTLAPHLHPMCQEAILNLKQCHAHHRFAKFLGACNNAKAALDKCLSQEYLVKRELNAAKAKKEKDRLRQTLEDEKHF 79
            MHPTLAPHLHPMCQEAI +LK CH    FAKFLGACN+ KAALDKCLS EYLV+RE+NAAKAKKEK+RLR+TL++EK +
Sbjct:    1 MHPTLAPHLHPMCQEAIQDLKMCHKQRSFAKFLGACNDVKAALDKCLSDEYLVRREINAAKAKKEKERLRRTLQEEKEY 79          
BLAST of Gvermi12194.t1 vs. uniprot
Match: A0A1X6NZJ3_PORUM (COX assembly mitochondrial protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NZJ3_PORUM)

HSP 1 Score: 89.4 bits (220), Expect = 1.580e-21
Identity = 44/80 (55.00%), Postives = 55/80 (68.75%), Query Frame = 0
Query:    1 MHPTLAPHLHPMCQEAILNLKQCHAHHRFAKFLGACNNAKAALDKCLSQEYLVKRELNAAKAKKEKDRLRQTLEDEKHFQ 80
            MHP LA HLHP CQ+AIL L  CH  H   KF GACN+AKAALD CL+ EYL++RE+N+  A +   RLR+ +  E+  Q
Sbjct:    1 MHPHLATHLHPSCQDAILALSTCHEGHPLTKFFGACNDAKAALDACLADEYLIRREMNSEAAAESHARLRERMRLEQEEQ 80          
BLAST of Gvermi12194.t1 vs. uniprot
Match: A0A5J4YYV1_PORPP (COX assembly mitochondrial protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YYV1_PORPP)

HSP 1 Score: 88.2 bits (217), Expect = 8.210e-21
Identity = 38/75 (50.67%), Postives = 59/75 (78.67%), Query Frame = 0
Query:    1 MHPTLAPHLHPMCQEAILNLKQCHAHHRFAKFLGACNNAKAALDKCLSQEYLVKRELNAAKAKKEKDRLRQTLED 75
            MHP LA H+HP+CQE IL L++CHA +++ K++GACN+ +  LD+CL QE  V+RELN   A++EK+R+R+ +++
Sbjct:   41 MHPNLALHIHPVCQEFILALQECHAENKYLKYVGACNDVRLELDRCLKQESRVRRELNLQAAREEKERVRERMKE 115          
BLAST of Gvermi12194.t1 vs. uniprot
Match: A0A0L0FMG6_9EUKA (COX assembly mitochondrial protein n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0FMG6_9EUKA)

HSP 1 Score: 73.6 bits (179), Expect = 1.720e-15
Identity = 33/75 (44.00%), Postives = 51/75 (68.00%), Query Frame = 0
Query:    1 MHPTLAPHLHPMCQEAILNLKQCHAHHRFAKFLGACNNAKAALDKCLSQEYLVKRELNAAKAKKEKDRLRQTLED 75
            MHP LA H+HP CQ+AI  L+ CH  + F KFLG CN+AK  LD+CL  EY V+++ N A++++ +   +  +++
Sbjct:    1 MHPQLARHVHPTCQDAIDALEACHRENSFRKFLGECNDAKTQLDRCLYDEYKVEQKRNLAESRRRRTAFKANMKE 75          
BLAST of Gvermi12194.t1 vs. uniprot
Match: A0A1Y1HY46_KLENI (COX assembly mitochondrial protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1HY46_KLENI)

HSP 1 Score: 70.9 bits (172), Expect = 2.260e-14
Identity = 35/75 (46.67%), Postives = 48/75 (64.00%), Query Frame = 0
Query:    1 MHPTLAPHLHPMCQEAILNLKQCHAHHRFAKFLGACNNAKAALDKCLSQEYLVKRELNAAKAKKEKDRLRQTLED 75
            MHP LA H HP C+  IL L+ CH+ H  AKF+G CN AK ALDKC  +E  V    N  ++K+ ++RL++  E+
Sbjct:    1 MHPPLALHKHPACKAQILALQVCHSEHPLAKFVGVCNEAKYALDKCFREEKRVNSAKNREESKRFQERLQKRREE 75          
BLAST of Gvermi12194.t1 vs. uniprot
Match: A4RVT2_OSTLU (COX assembly mitochondrial protein n=1 Tax=Ostreococcus lucimarinus (strain CCE9901) TaxID=436017 RepID=A4RVT2_OSTLU)

HSP 1 Score: 70.1 bits (170), Expect = 3.710e-14
Identity = 35/77 (45.45%), Postives = 48/77 (62.34%), Query Frame = 0
Query:    1 MHPTLAPHLHPMCQEAILNLKQCHAHHRFAKFLGACNNAKAALDKCLSQEYLVKRELNAAKAKKEKDRLRQTLEDEK 77
            MHP L    HP+C+EA++ LK+CHA +   KFLG CN  K  LD CL ++ L K   N   A++ K RL + LE+E+
Sbjct:    1 MHPPLTLDKHPICREAVIALKRCHAENALGKFLGKCNEEKWTLDACLKEQKLWKSRRNLKLARESKARLAKKLEEER 77          
BLAST of Gvermi12194.t1 vs. uniprot
Match: A0A8H7SR36_9FUNG (COX assembly mitochondrial protein n=1 Tax=Thamnidium elegans TaxID=101142 RepID=A0A8H7SR36_9FUNG)

HSP 1 Score: 68.2 bits (165), Expect = 2.820e-13
Identity = 34/71 (47.89%), Postives = 44/71 (61.97%), Query Frame = 0
Query:    1 MHPTLAPHLHPMCQEAILNLKQCHAHHRFAKFLGACNNAKAALDKCLSQEYLVKRELNAAKAKKEKDRLRQ 71
            MHP L  H    C EAI  L  CH    F KF+GACN+AK A+DKCL +E+L  R+LN   A +++ R+ Q
Sbjct:    1 MHPPLEAHKQEGCDEAIQALNDCHNAGTFNKFIGACNSAKTAVDKCLKEEFLAMRKLNKGAAVEKRKRMEQ 71          
BLAST of Gvermi12194.t1 vs. uniprot
Match: A0A1Y2HWQ0_9FUNG (COX assembly mitochondrial protein n=1 Tax=Catenaria anguillulae PL171 TaxID=765915 RepID=A0A1Y2HWQ0_9FUNG)

HSP 1 Score: 65.9 bits (159), Expect = 1.740e-12
Identity = 34/69 (49.28%), Postives = 49/69 (71.01%), Query Frame = 0
Query:    1 MHPTLA-PHLHPMCQEAILNLKQCHAHHRFAKFLGACNNAKAALDKCLSQEYLVKRELNAAKAKKEKDR 68
            MHPTL  PHL   CQE I  L +CHA   + K+ GACN+ K  L++CL+++Y+ +R +NAA+AKK +D+
Sbjct:    1 MHPTLDNPHL-ITCQEIIKALNECHATSGWKKYFGACNDLKHKLNQCLTEDYVARRAVNAAEAKKRRDK 68          
BLAST of Gvermi12194.t1 vs. uniprot
Match: F0WMZ2_9STRA (COX assembly mitochondrial protein n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WMZ2_9STRA)

HSP 1 Score: 65.5 bits (158), Expect = 2.020e-12
Identity = 34/62 (54.84%), Postives = 39/62 (62.90%), Query Frame = 0
Query:    1 MHPTLAPHLHPMCQEAILNLKQCHAHHRFAKFLGACNNAKAALDKCLSQEYLVKRELNAAKA 62
            MHP L    HP+CQ+ I NLKQCH  +  AKFLGACN AK ALD C   E   KR+ N  K+
Sbjct:    1 MHPPL-DRPHPLCQQVIKNLKQCHTENPRAKFLGACNEAKRALDDCFRMEKEEKRKQNLVKS 61          
BLAST of Gvermi12194.t1 vs. uniprot
Match: A0A835ZCC5_9STRA (COX assembly mitochondrial protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCC5_9STRA)

HSP 1 Score: 65.1 bits (157), Expect = 4.850e-12
Identity = 37/72 (51.39%), Postives = 45/72 (62.50%), Query Frame = 0
Query:    1 MHPTLAPHLHPMCQEAILNLKQCHAHHRFAKFLGACNNAKAALDKCLSQEYLVKRELN--AAKAKKEKDRLR 70
            MHP L    HPMCQE +  L +CH  + + KFLGACN AK ALDKC  QE + + + N  +AKA  EK R R
Sbjct:    1 MHPPLFKP-HPMCQEMVEQLVKCHDENPYGKFLGACNEAKTALDKCFRQEKIARYKANMESAKAMDEKRRQR 71          
The following BLAST results are available for this feature:
BLAST of Gvermi12194.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 24
Match NameE-valueIdentityDescription
A0A2V3IY86_9FLOR2.640e-3777.22COX assembly mitochondrial protein n=1 Tax=Gracila... [more]
A0A1X6NZJ3_PORUM1.580e-2155.00COX assembly mitochondrial protein n=1 Tax=Porphyr... [more]
A0A5J4YYV1_PORPP8.210e-2150.67COX assembly mitochondrial protein n=1 Tax=Porphyr... [more]
A0A0L0FMG6_9EUKA1.720e-1544.00COX assembly mitochondrial protein n=1 Tax=Sphaero... [more]
A0A1Y1HY46_KLENI2.260e-1446.67COX assembly mitochondrial protein n=1 Tax=Klebsor... [more]
A4RVT2_OSTLU3.710e-1445.45COX assembly mitochondrial protein n=1 Tax=Ostreoc... [more]
A0A8H7SR36_9FUNG2.820e-1347.89COX assembly mitochondrial protein n=1 Tax=Thamnid... [more]
A0A1Y2HWQ0_9FUNG1.740e-1249.28COX assembly mitochondrial protein n=1 Tax=Catenar... [more]
F0WMZ2_9STRA2.020e-1254.84COX assembly mitochondrial protein n=1 Tax=Albugo ... [more]
A0A835ZCC5_9STRA4.850e-1251.39COX assembly mitochondrial protein n=1 Tax=Tribone... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 52..79
NoneNo IPR availablePANTHERPTHR22977:SF1COX ASSEMBLY MITOCHONDRIAL PROTEIN 2 HOMOLOGcoord: 1..76
IPR013892Cytochrome c oxidase biogenesis protein Cmc1-likePFAMPF08583Cmc1coord: 1..68
e-value: 6.7E-15
score: 54.9
IPR013892Cytochrome c oxidase biogenesis protein Cmc1-likePANTHERPTHR22977COX ASSEMBLY MITOCHONDRIAL PROTEINcoord: 1..76

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_3404contigScGOVlb_3404:3803307..3803626 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi12194.t1Gvermi12194.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_3404 3803307..3803626 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi12194.t1 ID=Gvermi12194.t1|Name=Gvermi12194.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=81bp
MHPTLAPHLHPMCQEAILNLKQCHAHHRFAKFLGACNNAKAALDKCLSQE
YLVKRELNAAKAKKEKDRLRQTLEDEKHFQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013892Cyt_c_biogenesis_Cmc1-like