Gvermi12190.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi12190.t1
Unique NameGvermi12190.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length491
Homology
BLAST of Gvermi12190.t1 vs. uniprot
Match: A0A2V3IYD1_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IYD1_9FLOR)

HSP 1 Score: 433 bits (1114), Expect = 5.700e-145
Identity = 215/440 (48.86%), Postives = 304/440 (69.09%), Query Frame = 0
Query:    9 NRTILTAIPTPPPDFVNISNENQSPGQYVIGQTHFIPEKSINSPGMLSRSLDGASEEIILGLLSIVMIMTITEVVLTILSRKRQHQDPERNQLALVAIKVDGLLHLSTKWMNRREHLFSPHKRQKDVILSLLALSATLFIFVADIGAVVLTQPHQYPSNPYSYNLRGSHPIGSNLGLGKFLRRNALERPCVTPVFSSSNPYRNYSLSVCHLLNLKQAHKNSTESVDSVKIGSWFHKGGSDHHLTFGNSSIEIRTRAFVYGASGGTRRLLFPILYPSYMASTHYLHQIVIYMILQESCNAKRSTKRCEDAVAEHWSETEPVIRVIKLWTSRRGKTKEKVQGSETTLRYRIHSRPWITVLKSIGPLMTAELIEEVKGPGFYSHIVSEKEQDSIPGLIVQERRPLGILGMLFCTSLMLIALITLKRILQPVFLADRAWENFER 448
            NRTILT IP  P  FV +  E+Q PGQYV+GQ+ F     I  P +L R++ G++EE +LGLLSI MIM +TE++LT LSRKR   D E N+ A  A++VD  L L+ +   RRE       +++ V L++   +    I + D G + LTQP    S P  YNL+G+HPI ++ GLGKFLRR A+ERPCVTP+FS+SNP RN+S+S C  L L+QAH   T++V+++K GSWFH+GG DH +TFGN+SI ++TR F+YG   GTRR+LF +LY  Y+ +  YLH++V+Y I++ESCNA  +T+ C++ + EH SE+ PV R + LWT+R+GK +E V G ET L   I  +PW+TV K +GPL+T E + EV+GPG YSHI +E+ Q++I GL+VQE R LG++GML   S+++  L+  +R  +PV L+ +AW+ FE+
Sbjct:    4 NRTILTTIPEAPYGFVEVLPESQVPGQYVVGQSSFTGNPDIKKPFLLIRNVGGSAEEFMLGLLSIFMIMVVTELLLTFLSRKRSDIDDEENEYAYAAVRVDEYLRLNMERALRREGWPRRVGQRRKVHLTVTVFAVGAVILLIDTGTIFLTQPSISVSKPGDYNLKGTHPIAASPGLGKFLRRTAIERPCVTPIFSNSNPLRNFSMSACTTLGLEQAHTRVTDTVNTIKFGSWFHEGGGDHIITFGNASITMKTRLFLYGVENGTRRILFSMLYEDYLPAIRYLHELVMYGIMEESCNANYATRTCDEVLKEHRSESTPVNRTLVLWTTRKGKRRESVLGLETNLFLEIR-KPWVTVFKRVGPLLTTEQVTEVEGPGSYSHINTEERQENIRGLLVQESRNLGVIGMLLADSVLVAFLVCARRYCRPVSLSQKAWDLFEK 442          
BLAST of Gvermi12190.t1 vs. uniprot
Match: A0A2V3IZE0_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IZE0_9FLOR)

HSP 1 Score: 392 bits (1008), Expect = 1.480e-129
Identity = 200/437 (45.77%), Postives = 290/437 (66.36%), Query Frame = 0
Query:    9 NRTILTAIPTPPPDFVNISNENQSPGQYVIGQTHFIPEKSINSPGMLSRSLDG-ASEEIILGLLSIVMIMTITEVVLTILSRKRQHQDPERNQLALVAIKVDGLLHLSTKWMNRREHLFSPHKRQKDVILSLLALSATLFIFVADIGAVVLTQPHQYPSNPYSYNLRGSHPIGSNLGLGKFLRRNALERPCVTPVFSSSNPYRNYSLSVCHLLNLKQAHKNSTESVDSVKIGSWFHKGGSDHHLTFGNSSIEIRTRAFVYGASGGTRRLLFPILYPSYMASTHYLHQIVIYMILQESCNAKRSTKRCEDAVAEHWSETEPVIRVIKLWTSRRGKTKEKVQGSETTLRYRIHSRPWITVLKSIGPLMTAELIEEVKGPGFYSHIVSEKEQDSIPGLIVQERRPLGILGMLFCTSLMLIALITLKRILQPVFLADRAWE 444
            N T+LT IP PPP FV +  E+Q PGQYVIGQ+ F     IN P  L + + G A+E  ++GLLS  MI  IT++VLT LSR+R   D E N+ A  A++VD  L  S +   RR+       R+K   L  + L  ++ IF+ DI  ++LTQP    S P  YNL+G+HPI ++   G+  R+  +E PC+TPVFSSSNP RN+S+S C +  L++AH   T++V++++IGSWFH+GG DH +TFGN++I I+TR F+YG   GTRR+LF +LY  Y+ +  YLH++V+Y I++ESC AK +T+ C++ + EH SE+ P  R + LWT+R+GK KE V G E+ L   I S+PW TV +++GPL+T E + EV GPG YSHI +E  + ++ GL+VQE R LG+ G++   S++   LI   ++ +PVFL+ +AW+
Sbjct:    4 NGTVLTTIPEPPPKFVQVLPESQLPGQYVIGQSSFTSNPDINRPFFLVQKVGGSAAEAFVVGLLSTWMITVITKLVLTCLSRERSIDD-EENEYAYAAVRVDEFLRKSRREALRRKGWPRGVYRKKKACLIQMVLVISVVIFLIDICTIILTQPRISVSKPGDYNLKGTHPIAADREEGEEFRKTVIETPCITPVFSSSNPSRNFSISACTIFGLEEAHTRVTDTVNTIRIGSWFHEGGGDHIVTFGNATIRIKTRLFLYGVENGTRRILFSMLYEDYLPAIKYLHELVMYGIMEESCTAKYATRTCDEVLKEHRSESTPANRTVVLWTTRKGKRKETVVGLESNLFLEI-SQPWATVFRNVGPLLTGEQVTEVDGPGSYSHISTENREQNLHGLLVQETRYLGMFGLILADSVLSAFLICATKLCRPVFLSHKAWD 438          
BLAST of Gvermi12190.t1 vs. uniprot
Match: A0A2V3IY15_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IY15_9FLOR)

HSP 1 Score: 335 bits (860), Expect = 1.430e-106
Identity = 171/377 (45.36%), Postives = 247/377 (65.52%), Query Frame = 0
Query:   84 LTILSRKRQHQDPERNQLALVAIKVDGLLHLSTKWMNRREHL-FSPHKRQKDVILSLLALSATLFIFVADIGAVVLTQPHQYPSNPYSYNLRGSHPIGSNLGLGKFLRRNALERPCVTPVFSSSNPYRNYSLSVCHLLNLKQAHKNSTESVDSVKIGSWFHKGGSDHHLTFGNSSIEIRTRAFVYGASGGTRRLLFPILYPSYMASTHYLHQIVIYMILQESCNAKRSTKRCEDAVAEHWSETEPVIRVIKLWTSRRGKTKEKVQGSETTLRYRIHSRPWITVLKSIGPLMTAELIEEVKGPGFYSHIVSEKEQDSIPGLIVQERRPLGILGMLFCTSLMLIALITLKRILQPVFLADRAWENFERNVLSKLEMEDK 459
            LT LS +R   D E N+ A  A++VD  L L+ +   RRE    S   RQK  +L +  L+  + +FV +  A++ TQP    S P  YNL+G+HPI +  G  KFLRR   ERPC+TPVFSSSNP RN+S+S C +  L++AH   T++V+++KIGSWFH+GG DH +TFGN+ I I+T+  +YG +GGTRRLLF +LY  Y+ +  YLH++V+Y I++E+C AK +T+ C++ + EH SE+ P  R + +WT+R+ K KE V G ET L   I+ +PW+TV K +GPL+TAE + EVKGPG YSH  + + + ++ GL+VQE R LG+ GM     ++L  L+ L +  QP+ L+ +AW+ FE    S    E+K
Sbjct:    2 LTCLSHERSIDD-EENEYAYAAVRVDEFLQLNVERALRREGWPRSVEPRQKPYLL-VTVLAMGILMFVMNAVAILCTQPRISVSKPGDYNLKGTHPIAAGHGNAKFLRRIGRERPCITPVFSSSNPSRNFSISACTIFGLEEAHTRDTDTVNTIKIGSWFHEGGGDHIITFGNARITIKTKLLLYGVAGGTRRLLFSMLYEDYLPAVRYLHELVMYGIMEETCTAKYATRTCDEVLKEHRSESTPTNRTVVVWTTRKEKRKETVVGLETNLFLEIN-KPWVTVFKRVGPLLTAEQVTEVKGPGCYSHTETGEREQNLHGLLVQETRFLGVFGMTLADVVLLGVLLCLTKFCQPLSLSQKAWDLFENRYTSDASTENK 375          
The following BLAST results are available for this feature:
BLAST of Gvermi12190.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2V3IYD1_9FLOR5.700e-14548.86Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IZE0_9FLOR1.480e-12945.77Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IY15_9FLOR1.430e-10645.36Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 465..490
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 473..490
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 430..490
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 410..429
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 135..158
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 159..409
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 88..134
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..65
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 66..87
NoneNo IPR availableTMHMMTMhelixcoord: 66..88
NoneNo IPR availableTMHMMTMhelixcoord: 135..157
NoneNo IPR availableTMHMMTMhelixcoord: 411..433

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_3404contigScGOVlb_3404:3791857..3793329 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi12190.t1Gvermi12190.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_3404 3791857..3793329 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi12190.t1 ID=Gvermi12190.t1|Name=Gvermi12190.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=491bp
MVGYLSPMNRTILTAIPTPPPDFVNISNENQSPGQYVIGQTHFIPEKSIN
SPGMLSRSLDGASEEIILGLLSIVMIMTITEVVLTILSRKRQHQDPERNQ
LALVAIKVDGLLHLSTKWMNRREHLFSPHKRQKDVILSLLALSATLFIFV
ADIGAVVLTQPHQYPSNPYSYNLRGSHPIGSNLGLGKFLRRNALERPCVT
PVFSSSNPYRNYSLSVCHLLNLKQAHKNSTESVDSVKIGSWFHKGGSDHH
LTFGNSSIEIRTRAFVYGASGGTRRLLFPILYPSYMASTHYLHQIVIYMI
LQESCNAKRSTKRCEDAVAEHWSETEPVIRVIKLWTSRRGKTKEKVQGSE
TTLRYRIHSRPWITVLKSIGPLMTAELIEEVKGPGFYSHIVSEKEQDSIP
GLIVQERRPLGILGMLFCTSLMLIALITLKRILQPVFLADRAWENFERNV
LSKLEMEDKCSSGAVTLGKEASSDEKLPAERLSHYRSEVE*
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