Gvermi12184.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi12184.t1
Unique NameGvermi12184.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length167
Homology
BLAST of Gvermi12184.t1 vs. uniprot
Match: A0A2V3IY46_9FLOR (Nucleolar protein 16 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IY46_9FLOR)

HSP 1 Score: 242 bits (617), Expect = 1.470e-79
Identity = 123/164 (75.00%), Postives = 142/164 (86.59%), Query Frame = 0
Query:    1 MGKARPGSRKGMTKLYKSAKRAARKKAAQQRSVRPRSSAVPHETIRSAWDWRLTPEKNLTKIGLQASVNHIKKTGAERKVCIPIQSIPNGSESVIMELEKEAAREERKNVVIHPGERRALEAMIRRHGEDWEAMARDIKLNYLQWTPNQLRKKVERMRSVDAVN 164
            MGK RPGSRKGMTKLYKSAKR ARKKAAQQRS+RPRSS V HET+RS WD RLTP  NL KIGLQASVNH+ KT   RKV IPIQ+IP  +E+VI +LEKEA+R+ER+N+V+HPGERRALEAMI+RHG++W AM RDIKLNYLQWT  QL++KVERMR++DA N
Sbjct:    1 MGKPRPGSRKGMTKLYKSAKRTARKKAAQQRSIRPRSSKVVHETVRSTWDSRLTPGNNLKKIGLQASVNHMAKTRGGRKVSIPIQAIPKDAEAVIEDLEKEASRKERRNLVVHPGERRALEAMIKRHGDNWTAMCRDIKLNYLQWTATQLQRKVERMRAIDATN 164          
BLAST of Gvermi12184.t1 vs. uniprot
Match: R7Q5J5_CHOCR (Nucleolar protein 16 n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q5J5_CHOCR)

HSP 1 Score: 145 bits (366), Expect = 2.100e-41
Identity = 82/163 (50.31%), Postives = 110/163 (67.48%), Query Frame = 0
Query:    1 MGKARPGSRKGMTKLYKSAKRAARKKAAQQRSVRPRSSAVPHETIRSAWDWRLTPEKNLTKIGLQASVNHIKKTGAERKVCIPIQSIPNG--SESVIMELEKEAAREERK-NVVIHPGERRALEAMIRRHGEDWEAMARDIKLNYLQWTPNQLRKKVERMRSV 160
            M K RPGSRK MTKL  ++K+AAR++AA+Q +       + H  +R AWD R +P  NL  +GL  SVN I K+  +    I I  IP       V+ +L+ EA + ER+ N V+HPGERRALE M++R+G+DWE MARDIKLNYLQWTP +L++KVERM ++
Sbjct:    1 MVKQRPGSRKDMTKLGTASKKAARRQAAKQANGLANRRTIVHPAMRGAWDHRKSPASNLASVGLTGSVNKISKSRDKIGRTIEIAPIPTSVPHNHVLQKLQDEANKPEREPNNVVHPGERRALEKMVKRYGDDWEKMARDIKLNYLQWTPRKLQRKVERMNAI 163          
BLAST of Gvermi12184.t1 vs. uniprot
Match: A0A0A9WRS0_LYGHE (Nucleolar protein 16 n=2 Tax=Mirini TaxID=236659 RepID=A0A0A9WRS0_LYGHE)

HSP 1 Score: 65.9 bits (159), Expect = 2.300e-10
Identity = 41/124 (33.06%), Postives = 74/124 (59.68%), Query Frame = 0
Query:   39 AVPHETIRSAWDWRLTPEKNLTKIGLQASVNHIKKTGAERKV-CIPIQSIPNGSES-VIMELEKEAAREERKNVVIHPGERRALEAMIRRHGEDWEAMARDIKLNYLQWTPNQLRKKVERMRSV 160
            A+  E ++  WD R + ++NL ++GL + VN   K   +R    + + S+P+  ++ V+MELE +A    +KN  +   +   L  +I ++GED++AMARD K+N  Q T  QLR+K++  +++
Sbjct:   31 AITCEQMKGEWDSRKSVKENLRQMGLTSDVNATIKIPTDRPAELMVVDSLPDPKKTHVVMELEADAKAPRQKNFRLPNSQVFWLSKLIDKYGEDYQAMARDRKMNAFQETWKQLRQKIKTFKNI 154          
BLAST of Gvermi12184.t1 vs. uniprot
Match: UPI0006D4FF1A (nucleolar protein 16-like n=1 Tax=Halyomorpha halys TaxID=286706 RepID=UPI0006D4FF1A)

HSP 1 Score: 64.7 bits (156), Expect = 5.410e-10
Identity = 48/155 (30.97%), Postives = 84/155 (54.19%), Query Frame = 0
Query:   12 MTKLYKSAKRAARKKAAQQRSVRPRSSAVPH---ETIRSAWDWRLTPEKNLTKIGLQASVN-HIKKTGAERKV--CIPIQSIPNGSESVIMELEKEAAREERKNVVIHPGERRALEAMIRRHGEDWEAMARDIKLNYLQWTPNQLRKKVERMRSV 160
            MTKL K  KR   +    ++ +R + + +P+   + +++ WD + +   NL ++GL    N +IK    + K+    P  S+      V+ +LE EA    ++N  +   +   +   I ++ ED+EAMA+D KLN+LQ+TPNQLR K+   +S+
Sbjct:    1 MTKLRKQRKRKVYRFDVNRKRMRKKMNRLPNIQCDQLKTEWDKKKSTRTNLEQMGLVYDPNKNIKIPSNKPKLNKAEPEPSVITEKTHVVRDLEVEAKAPRQRNFKLPKSQVDWICKCIDKYNEDYEAMAKDRKLNFLQYTPNQLRTKINVFKSI 155          
BLAST of Gvermi12184.t1 vs. uniprot
Match: A0A6G0XS53_9STRA (Nucleolar protein 16 n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XS53_9STRA)

HSP 1 Score: 63.5 bits (153), Expect = 1.150e-9
Identity = 40/127 (31.50%), Postives = 70/127 (55.12%), Query Frame = 0
Query:   40 VPHETIRSAWDWRLTPEKNLTKIGLQASVNHIKKTGAERKVCIPIQSIPNGSESVIMELEKEAAREERKNVVIHPGERRALEAMIRRHGEDWEAMARDIKLNYLQWTPNQLRKKVERMRSVDAVNVK 166
            V   TI+  WD +LT  +N  KIGL  + N ++         I  + + +  +S ++  + +  ++E  ++     E   L  +I +HGED++AMARDIK+N  QWT  +L+++  R++ VDA  +K
Sbjct:   30 VGDATIQKVWDHKLTTAQNYEKIGLWKNPNSLESLRECTDELIDPEELFDVPDSDVLSFQDKNHKKEANHM--SEMEINYLRPLIEKHGEDYDAMARDIKVNNEQWTVAKLKRRCARLKLVDAKIIK 154          
BLAST of Gvermi12184.t1 vs. uniprot
Match: A0A5J4YSW2_PORPP (Nucleolar protein 16 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YSW2_PORPP)

HSP 1 Score: 62.4 bits (150), Expect = 3.410e-9
Identity = 55/158 (34.81%), Postives = 79/158 (50.00%), Query Frame = 0
Query:    1 MGKARPGSRKGMTKLYKSAKRAARKKAAQQRSVRPRSSAVPHETIRSAWDWRLTPEKNLTKIGLQASVNHIKKTGAERKVCIPIQSIPNGSESVIMELEKEAAREERKNVVIHP--GERRALEAMIRRHGEDWEAMARDIKLNYLQWTPNQLRKKVER 156
            M K +P +  G TK   + KR  RK+   Q++ +     V   T+R AWD      +NL  IGL A  N      A+           +   +V+  +E+ AA  E K    HP  GE + LE +I +HG+D+EAMARDIK+N +Q T   L ++V R
Sbjct:    1 MVKRKPST--GATKSGSAQKRH-RKRLHSQKTGKVFKQHVADATVREAWDNSKNVRENLDAIGLAARANAPLNNKAKAS--------GDAQTAVVARMEELAAVGE-KEAPRHPAEGEAQVLEKLIAKHGDDYEAMARDIKINTMQHTSRVLERRVRR 146          
BLAST of Gvermi12184.t1 vs. uniprot
Match: A0A024U0D1_9STRA (Nucleolar protein 16 n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U0D1_9STRA)

HSP 1 Score: 60.5 bits (145), Expect = 1.280e-8
Identity = 37/125 (29.60%), Postives = 68/125 (54.40%), Query Frame = 0
Query:   42 HETIRSAWDWRLTPEKNLTKIGLQASVNHIKKTGAERKVCIPIQSIPNGSESVIMELEKEAAREERKNVVIHPGERRALEAMIRRHGEDWEAMARDIKLNYLQWTPNQLRKKVERMRSVDAVNVK 166
            H+  +  WD +LT  +N  KIGL    N IK         I    + +  +S ++  + +  ++   ++     E + L  ++++HG+D++AMARDIK+N  QWT  +L+++  R++ VDA  +K
Sbjct:   18 HDVAQEVWDHKLTTAQNYDKIGLWKDPNAIKHIRECTDEVIDPDELFDVPDSDVLSFQDKNHKKAENHM--SELEIQYLRPLVKKHGDDYDAMARDIKVNNEQWTVAKLKRRCARLKLVDANIIK 140          
BLAST of Gvermi12184.t1 vs. uniprot
Match: D2UY72_NAEGR (Nucleolar protein 16 n=1 Tax=Naegleria gruberi TaxID=5762 RepID=D2UY72_NAEGR)

HSP 1 Score: 60.5 bits (145), Expect = 3.070e-8
Identity = 35/110 (31.82%), Postives = 59/110 (53.64%), Query Frame = 0
Query:   49 WDWRLTPEKNLTKIGLQASVNHIKKTGAERKVCIPIQSIPNGSESVIMELEKEAAREERKNVVIHPGERRALEAMIRRHGEDWEAMARDIKLNYLQWTPNQLRKKVERMR 158
            WD  LT + N  ++ L A  N   +   +    +P +  P   + +I    K+   + R   ++H  ER+ L+A+I +HGE++ AMA D  +N LQWTP Q  K+V++ +
Sbjct:   39 WDRELTAKYNYARLDLVADPNKPSEENHQVAETLPKEKKPEILDEII---SKKPQFKSRLCFIVHESERKTLQALIDKHGENYTAMAWDTDVNILQWTPIQCEKRVKKYK 145          
BLAST of Gvermi12184.t1 vs. uniprot
Match: A0A1V9ZWA8_9STRA (Nucleolar protein 16 n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZWA8_9STRA)

HSP 1 Score: 59.3 bits (142), Expect = 4.580e-8
Identity = 38/122 (31.15%), Postives = 67/122 (54.92%), Query Frame = 0
Query:   45 IRSAWDWRLTPEKNLTKIGLQASVNHIKKTGAERKVCIPIQSIPNGSESVIMELEKEAAREERKNVVIHPGERRALEAMIRRHGEDWEAMARDIKLNYLQWTPNQLRKKVERMRSVDAVNVK 166
            I+  WD  LT  +N  KIGL  + N + +  +     I  + + +  +S I+ L  E   ++  N +    E + L  ++ ++G+D+ AMARDIK+N  QWT  +L+++  RM+ +DA  +K
Sbjct:   35 IKKKWDHNLTTRQNYEKIGLCQNPNSLDQLRSCTDEVIDPEELFDVPDSDILNLNNERNPKKMDNHMSEM-EMQYLRPLVAKYGDDFTAMARDIKINNEQWTAAKLKRRCARMKLIDAKIIK 155          
BLAST of Gvermi12184.t1 vs. uniprot
Match: K3WXR7_GLOUD (Nucleolar protein 16 n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WXR7_GLOUD)

HSP 1 Score: 59.3 bits (142), Expect = 5.660e-8
Identity = 41/123 (33.33%), Postives = 62/123 (50.41%), Query Frame = 0
Query:   45 IRSAWDWRLTPEKNLTKIGLQASVNHIKKT-----GAERKVCIPIQSIPNGSESVIMELEKEAAREERKNVVIHPGERRALEAMIRRHGEDWEAMARDIKLNYLQWTPNQLRKKVERMRSVDA 162
            I+  WD +LT  +N  KIGLQ + N  K+      GAE  +    Q         + E         R    +   E + L  +I +HGED++AM RDIK+N +QWT N+L+++  R+  +DA
Sbjct:   36 IQKQWDHKLTTRQNYEKIGLQVNPNSHKELKQSIEGAEGALDDEPQFFHVPDSDFLSERNPR-----RPENYMSEEEIKYLRPLIAKHGEDYKAMERDIKVNNMQWTENKLKRRCARLALLDA 153          
The following BLAST results are available for this feature:
BLAST of Gvermi12184.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IY46_9FLOR1.470e-7975.00Nucleolar protein 16 n=1 Tax=Gracilariopsis chorda... [more]
R7Q5J5_CHOCR2.100e-4150.31Nucleolar protein 16 n=1 Tax=Chondrus crispus TaxI... [more]
A0A0A9WRS0_LYGHE2.300e-1033.06Nucleolar protein 16 n=2 Tax=Mirini TaxID=236659 R... [more]
UPI0006D4FF1A5.410e-1030.97nucleolar protein 16-like n=1 Tax=Halyomorpha haly... [more]
A0A6G0XS53_9STRA1.150e-931.50Nucleolar protein 16 n=1 Tax=Aphanomyces euteiches... [more]
A0A5J4YSW2_PORPP3.410e-934.81Nucleolar protein 16 n=1 Tax=Porphyridium purpureu... [more]
A0A024U0D1_9STRA1.280e-829.60Nucleolar protein 16 n=1 Tax=Aphanomyces invadans ... [more]
D2UY72_NAEGR3.070e-831.82Nucleolar protein 16 n=1 Tax=Naegleria gruberi Tax... [more]
A0A1V9ZWA8_9STRA4.580e-831.15Nucleolar protein 16 n=1 Tax=Thraustotheca clavata... [more]
K3WXR7_GLOUD5.660e-833.33Nucleolar protein 16 n=1 Tax=Globisporangium ultim... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019002Ribosome biogenesis protein Nop16PFAMPF09420Nop16coord: 91..157
e-value: 1.4E-16
score: 61.2
IPR019002Ribosome biogenesis protein Nop16PANTHERPTHR13243HSPC111 PROTEIN-RELATEDcoord: 12..161
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..41
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 14..31

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_3404contigScGOVlb_3404:3774497..3774997 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi12184.t1Gvermi12184.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_3404 3774497..3774997 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi12184.t1 ID=Gvermi12184.t1|Name=Gvermi12184.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=167bp
MGKARPGSRKGMTKLYKSAKRAARKKAAQQRSVRPRSSAVPHETIRSAWD
WRLTPEKNLTKIGLQASVNHIKKTGAERKVCIPIQSIPNGSESVIMELEK
EAAREERKNVVIHPGERRALEAMIRRHGEDWEAMARDIKLNYLQWTPNQL
RKKVERMRSVDAVNVK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019002Ribosome_biogenesis_Nop16