Gvermi12183.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi12183.t1
Unique NameGvermi12183.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length261
Homology
BLAST of Gvermi12183.t1 vs. uniprot
Match: A0A2V3J116_9FLOR (Peptide-methionine (S)-S-oxide reductase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J116_9FLOR)

HSP 1 Score: 396 bits (1017), Expect = 1.180e-137
Identity = 179/248 (72.18%), Postives = 209/248 (84.27%), Query Frame = 0
Query:   11 MPTTFVPPLPVALRPLRHNTSPVRPGKRFVQAAMGPFVWFQNLMRPATTTKSMTATPIAPPARHVVLGTPIAPPPGGWKPPLHEAMFGLGCFWGAERKFWQMEGIYTTSVGYAGGETEFPTYRQVCTGRTNHAEVVNVVYDTSKTSYEDLLNVFWAAHDPTQKNRQGNDVGTQYRSVIYYYNDEQKKAAEETRNHFNAILKEAGRNGVATEIQPAPQYFYAEEYHQQYLHKNPMGYCGLGGTGLYTPR 258
            M + FV PLP++ R +    SP+RP     +AAMGP  W Q+L+RP T   SM  TPIAPP +H VLG P+APPPGGW+ PL EAMFGLGCFWGAERKFWQ +G++TTSVGYAGG T+ PTYR+VC+GRT HAEVVNVV+D+SKTSYED++NVFW +HDPTQKNRQGNDVGTQYRSVIYYYNDEQK+ AE TR+HFN +LKEAGR+ +ATEIQ AP+Y+YAEEYHQQYLHKNP GYCGLGGTGLY+PR
Sbjct:    1 MRSAFVQPLPLSTRSVHRAISPLRPRTTVPRAAMGPIDWLQSLIRPTT---SMATTPIAPPTKHTVLGNPVAPPPGGWQAPLQEAMFGLGCFWGAERKFWQKDGVHTTSVGYAGGTTDLPTYREVCSGRTGHAEVVNVVFDSSKTSYEDIINVFWESHDPTQKNRQGNDVGTQYRSVIYYYNDEQKRVAEATRDHFNRLLKEAGRSAIATEIQAAPKYYYAEEYHQQYLHKNPFGYCGLGGTGLYSPR 245          
BLAST of Gvermi12183.t1 vs. uniprot
Match: R7QA15_CHOCR (Peptide-methionine (S)-S-oxide reductase n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QA15_CHOCR)

HSP 1 Score: 317 bits (812), Expect = 6.530e-107
Identity = 142/193 (73.58%), Postives = 163/193 (84.46%), Query Frame = 0
Query:   67 PIAPPARHVVLGTPIAPPPGGWKPPLHEAMFGLGCFWGAERKFWQMEGIYTTSVGYAGGETEFPTYRQVCTGRTNHAEVVNVVYDTSKTSYEDLLNVFWAAHDPTQKNRQGNDVGTQYRSVIYYYNDEQKKAAEETRNHFNAILKEAGRNGVATEIQPAPQYFYAEEYHQQYLHKNPMGYCGLGGTGLYTPRK 259
            PIAPP +HVVLGT  A P GGWKPPL +A+FGLGCFWGAERKFW   G++TTSVGYAGG    P YR VC+GRT HAEVVNVV+D SKTS+ED+L++FW AHDPT KNRQGNDVG+QYRS I+YYND Q+K AE+TR+HFN +LKEAGRN   TEI+PA +Y++AEEYHQQYLHKNP GYCGLGGTGLY P K
Sbjct:   20 PIAPPEKHVVLGTSPAQPEGGWKPPLEQAIFGLGCFWGAERKFWTAPGVHTTSVGYAGGMVPNPRYRPVCSGRTGHAEVVNVVFDQSKTSFEDMLDIFWDAHDPTTKNRQGNDVGSQYRSAIFYYNDAQRKLAEQTRDHFNDLLKEAGRNACTTEIKPAGKYYFAEEYHQQYLHKNPTGYCGLGGTGLYRPLK 212          
BLAST of Gvermi12183.t1 vs. uniprot
Match: M2VY06_GALSU (Peptide-methionine (S)-S-oxide reductase n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2VY06_GALSU)

HSP 1 Score: 263 bits (672), Expect = 1.410e-85
Identity = 122/193 (63.21%), Postives = 145/193 (75.13%), Query Frame = 0
Query:   68 IAPPARHVVLGTPIAPPPGGWKPPLHEAMFGLGCFWGAERKFWQMEGIYTTSVGYAGGETEFPTYRQVCTGRTNHAEVVNVVYDTSKTSYEDLLNVFWAAHDPTQKNRQGNDVGTQYRSVIYYYNDEQKKAAEETRNHFNAILKEAGRNGVATEIQPAPQYFYAEEYHQQYLHKNPMGYCGLGGTGLYTPRKN 260
            I P  +H VLGTP++      +     A+FGLGCFWGAERKFWQ +G+Y+T+VGYAGG T+ PTY  VCT RT HAEVV VVYD  KTSYE LL+VFWA HDPTQ NRQGND GTQYRSVI+YY+D QK  AEET+ HF  +L + G   + TEI PA  +++AE+YHQQYL KNP GYCGLGGTG Y PR++
Sbjct:   26 IIPSEKHYVLGTPLSA--NFEEMGFQYALFGLGCFWGAERKFWQTKGVYSTAVGYAGGRTKNPTYEDVCTDRTGHAEVVRVVYDPKKTSYEQLLDVFWANHDPTQLNRQGNDRGTQYRSVIFYYDDVQKNCAEETKRHFQEVLAKKGYGNIVTEIVPASVFYFAEDYHQQYLAKNPNGYCGLGGTGCYEPRQD 216          
BLAST of Gvermi12183.t1 vs. uniprot
Match: A0A7W7ZXC1_9ACTN (Peptide methionine sulfoxide reductase MsrA n=2 Tax=Nonomuraea TaxID=83681 RepID=A0A7W7ZXC1_9ACTN)

HSP 1 Score: 257 bits (657), Expect = 2.570e-83
Identity = 119/188 (63.30%), Postives = 144/188 (76.60%), Query Frame = 0
Query:   71 PARHVVLGTPIAPP-PGGWKPPLHEAMFGLGCFWGAERKFWQMEGIYTTSVGYAGGETEFPTYRQVCTGRTNHAEVVNVVYDTSKTSYEDLLNVFWAAHDPTQKNRQGNDVGTQYRSVIYYYNDEQKKAAEETRNHFNAILKEAGRNGVATEIQPAPQYFYAEEYHQQYLHKNPMGYCGLGGTGLYTP 257
            P+RH VL  P+APP P G    L  A FGLGCFWGAERKFWQ EG+YTT+VGY GG TE PTY +VCTG T H E V VVYD +K SYE+LL VFW  HDPTQ  RQGNDVGTQYRS IYY++ EQ+K+A  +R+ + A+LK +G + + TEI PAP++F+AE+YHQQYLH+N  GYCG+GGTG+  P
Sbjct:   29 PSRHAVLDAPLAPPYPEG----LEIADFGLGCFWGAERKFWQTEGVYTTAVGYQGGYTENPTYEEVCTGATGHTEAVRVVYDPAKVSYEELLKVFWENHDPTQGMRQGNDVGTQYRSAIYYHSPEQEKSALASRDAYQAVLKSSGYDEITTEIAPAPEFFFAEDYHQQYLHRNKNGYCGIGGTGVACP 212          
BLAST of Gvermi12183.t1 vs. uniprot
Match: A0A7J9WKV0_9ACTN (Peptide methionine sulfoxide reductase MsrA n=1 Tax=Nitriliruptorales bacterium TaxID=2497630 RepID=A0A7J9WKV0_9ACTN)

HSP 1 Score: 256 bits (655), Expect = 4.680e-83
Identity = 117/188 (62.23%), Postives = 143/188 (76.06%), Query Frame = 0
Query:   71 PARHVVLGTPIAPP-PGGWKPPLHEAMFGLGCFWGAERKFWQMEGIYTTSVGYAGGETEFPTYRQVCTGRTNHAEVVNVVYDTSKTSYEDLLNVFWAAHDPTQKNRQGNDVGTQYRSVIYYYNDEQKKAAEETRNHFNAILKEAGRNGVATEIQPAPQYFYAEEYHQQYLHKNPMGYCGLGGTGLYTP 257
            P RH VLGTP+ PP P G      +A+FG+GCFWGAE+ FW+++G+YTT+VGYAGG T  PTYR+VC+G T HAEVV V YD  + SYEDLL  FW  HDPTQ  RQGNDVGTQYRS +Y  +D Q+ AAE +R+ + A L++AG   + TEI+PAP ++YAEEYHQQYLHKNP GYCGLGGTG+  P
Sbjct:   26 PERHAVLGTPLKPPFPQGTA----QAVFGMGCFWGAEKAFWELDGVYTTAVGYAGGPTPNPTYREVCSGDTGHAEVVLVAYDPERISYEDLLKAFWEGHDPTQGMRQGNDVGTQYRSAVYASDDAQQAAAEASRDQYQAKLRKAGYGDITTEIRPAPAFYYAEEYHQQYLHKNPAGYCGLGGTGVACP 209          
BLAST of Gvermi12183.t1 vs. uniprot
Match: A0A2V7X937_9BACT (Peptide methionine sulfoxide reductase MsrA n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2V7X937_9BACT)

HSP 1 Score: 254 bits (650), Expect = 2.510e-82
Identity = 119/190 (62.63%), Postives = 141/190 (74.21%), Query Frame = 0
Query:   68 IAPPARHVVLGTPIAPPPGGWKPPLHEAMFGLGCFWGAERKFWQMEGIYTTSVGYAGGETEFPTYRQVCTGRTNHAEVVNVVYDTSKTSYEDLLNVFWAAHDPTQKNRQGNDVGTQYRSVIYYYNDEQKKAAEETRNHFNAILKEAGRNGVATEIQPAPQYFYAEEYHQQYLHKNPMGYCGLGGTGLYTP 257
            +A PARH V G P+   P G    L EA+FG+GCFWGAE+ FW   G+ +TSVGYAGG T  PTYR+VC+GRT HAEVV VV+D S+  YEDLL VFW  HDPTQ  RQGNDVGTQYRS IY Y DEQ++AAE +R+ +  +L+ AG   + TEI PAP+Y++AEEYHQQYL KNP GYCG GGTGL  P
Sbjct:   22 MAVPARHFVSGAPLEGLPAG----LQEAVFGMGCFWGAEKGFWLTPGVVSTSVGYAGGTTPNPTYREVCSGRTGHAEVVRVVFDPSRVRYEDLLRVFWEGHDPTQGMRQGNDVGTQYRSAIYTYGDEQRRAAESSRDAYEKVLRAAGFGAITTEIAPAPEYYFAEEYHQQYLAKNPDGYCGHGGTGLSCP 207          
BLAST of Gvermi12183.t1 vs. uniprot
Match: A0A2V7URG7_9BACT (Peptide methionine sulfoxide reductase MsrA n=2 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2V7URG7_9BACT)

HSP 1 Score: 253 bits (647), Expect = 7.920e-82
Identity = 118/188 (62.77%), Postives = 143/188 (76.06%), Query Frame = 0
Query:   71 PARHVVLGTPIAPP-PGGWKPPLHEAMFGLGCFWGAERKFWQMEGIYTTSVGYAGGETEFPTYRQVCTGRTNHAEVVNVVYDTSKTSYEDLLNVFWAAHDPTQKNRQGNDVGTQYRSVIYYYNDEQKKAAEETRNHFNAILKEAGRNGVATEIQPAPQYFYAEEYHQQYLHKNPMGYCGLGGTGLYTP 257
            PARH VLGT + PP P G +     A+FGLGCFWGAERKFWQ  G+ +T+VGYAGG T  PTYR+VC+G T HAEVV V++D  K  YEDLL VFW +HDPTQ  RQGNDVGTQYRS IY++++EQ++AAE +R  + A L+ AG+  + TEI P P ++YAEEYHQQYL KNP GYCGLGGTG+  P
Sbjct:   27 PARHFVLGTALKPPFPEGTR----TALFGLGCFWGAERKFWQTAGVISTAVGYAGGVTPNPTYREVCSGLTGHAEVVRVLFDPDKVRYEDLLRVFWESHDPTQGMRQGNDVGTQYRSAIYWHDEEQRRAAEASREAYQAALRAAGQGEITTEIAPEPDFYYAEEYHQQYLAKNPGGYCGLGGTGVSCP 210          
BLAST of Gvermi12183.t1 vs. uniprot
Match: A0A7Y5WV21_9BACT (Peptide methionine sulfoxide reductase MsrA n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A7Y5WV21_9BACT)

HSP 1 Score: 253 bits (646), Expect = 1.330e-81
Identity = 119/188 (63.30%), Postives = 141/188 (75.00%), Query Frame = 0
Query:   71 PARHVVLGTPIAPP-PGGWKPPLHEAMFGLGCFWGAERKFWQMEGIYTTSVGYAGGETEFPTYRQVCTGRTNHAEVVNVVYDTSKTSYEDLLNVFWAAHDPTQKNRQGNDVGTQYRSVIYYYNDEQKKAAEETRNHFNAILKEAGRNGVATEIQPAPQYFYAEEYHQQYLHKNPMGYCGLGGTGLYTP 257
            PARH VL  P+  P P G    L  AMFGLGCFWGAERKFWQ+ G+YTT+VGYA G T  PTYR+VC+G T H+EVV VV+D  + SYEDLL VFW +HDPTQ  RQGNDVGTQYRS IYYY++ Q+ AAE T + +   L +AG   + TEI PAP+++YAE+YHQQYL KNP GYCGLGGTG+  P
Sbjct:   25 PARHHVLEAPLQGPFPAG----LQTAMFGLGCFWGAERKFWQVPGVYTTAVGYAAGLTPNPTYREVCSGMTGHSEVVLVVFDPKRVSYEDLLKVFWESHDPTQGMRQGNDVGTQYRSGIYYYDEAQRAAAERTHDEYQQALSKAGHGTITTEILPAPEFYYAEDYHQQYLSKNPNGYCGLGGTGVTCP 208          
BLAST of Gvermi12183.t1 vs. uniprot
Match: A0A6J4QBN3_9ACTN (Peptide methionine sulfoxide reductase MsrA n=1 Tax=uncultured Rubrobacteraceae bacterium TaxID=349277 RepID=A0A6J4QBN3_9ACTN)

HSP 1 Score: 253 bits (647), Expect = 1.490e-81
Identity = 120/206 (58.25%), Postives = 145/206 (70.39%), Query Frame = 0
Query:   52 NLMRPATTTKSMTATPIAPPARHVVLGTPIAPPPGGWKPPLHEAMFGLGCFWGAERKFWQMEGIYTTSVGYAGGETEFPTYRQVCTGRTNHAEVVNVVYDTSKTSYEDLLNVFWAAHDPTQKNRQGNDVGTQYRSVIYYYNDEQKKAAEETRNHFNAILKEAGRNGVATEIQPAPQYFYAEEYHQQYLHKNPMGYCGLGGTGLYTP 257
             ++ P            A P RH VL TP+ PP   +   L+ A+FGLGCFWGAERKFWQ++G+YTT+VGYAGG T  PTY +VC+GRT H E V VV+D  K SY DLL VFW AHDPTQ  RQGNDVGTQYRS IY+ +DEQ++AAEETR+ +   L+ AG   ++TEI PA  ++YAE YHQQYLHK P GYCGL GTG+  P
Sbjct:    9 KMITPTEALPGQEQRTFAVPERHAVLDTPLNPP---FPEDLNTAVFGLGCFWGAERKFWQIDGVYTTAVGYAGGFTPNPTYGEVCSGRTGHTEAVLVVFDPEKVSYRDLLAVFWEAHDPTQGMRQGNDVGTQYRSAIYFADDEQRRAAEETRDAYEEALRGAGYGSISTEIAPAGPFYYAEGYHQQYLHKVPNGYCGLDGTGVSCP 211          
BLAST of Gvermi12183.t1 vs. uniprot
Match: A0A534XQG8_9DELT (Peptide methionine sulfoxide reductase MsrA n=7 Tax=Bacteria TaxID=2 RepID=A0A534XQG8_9DELT)

HSP 1 Score: 252 bits (643), Expect = 2.540e-81
Identity = 117/192 (60.94%), Postives = 144/192 (75.00%), Query Frame = 0
Query:   67 PIAPPARHVVLGTPIAPP-PGGWKPPLHEAMFGLGCFWGAERKFWQMEGIYTTSVGYAGGETEFPTYRQVCTGRTNHAEVVNVVYDTSKTSYEDLLNVFWAAHDPTQKNRQGNDVGTQYRSVIYYYNDEQKKAAEETRNHFNAILKEAGRNGVATEIQPAPQYFYAEEYHQQYLHKNPMGYCGLGGTGLYTP 257
            P+  P RH VLGTP+ PP P G +     A+FG+GCFWGAERKFW+++G+YTT+VGYAGG T+ PTYR+VC+G T HAEVV VVYD  + SY +LL  FW +HDPTQ  RQGNDVGTQYRS IY  +  Q++AAE +R  + A L EAG   +ATEI P P ++YAE+YHQQYL KNP GYCG+GGTG+  P
Sbjct:   19 PMRVPPRHTVLGTPLLPPFPEGSE----RAVFGMGCFWGAERKFWELDGVYTTAVGYAGGYTKNPTYREVCSGGTGHAEVVLVVYDPKRVSYAELLRTFWESHDPTQGMRQGNDVGTQYRSAIYATSKAQREAAEASREQYQAALAEAGHGRIATEIAPEPAFYYAEDYHQQYLAKNPGGYCGIGGTGVSCP 206          
The following BLAST results are available for this feature:
BLAST of Gvermi12183.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J116_9FLOR1.180e-13772.18Peptide-methionine (S)-S-oxide reductase n=1 Tax=G... [more]
R7QA15_CHOCR6.530e-10773.58Peptide-methionine (S)-S-oxide reductase n=1 Tax=C... [more]
M2VY06_GALSU1.410e-8563.21Peptide-methionine (S)-S-oxide reductase n=1 Tax=G... [more]
A0A7W7ZXC1_9ACTN2.570e-8363.30Peptide methionine sulfoxide reductase MsrA n=2 Ta... [more]
A0A7J9WKV0_9ACTN4.680e-8362.23Peptide methionine sulfoxide reductase MsrA n=1 Ta... [more]
A0A2V7X937_9BACT2.510e-8262.63Peptide methionine sulfoxide reductase MsrA n=1 Ta... [more]
A0A2V7URG7_9BACT7.920e-8262.77Peptide methionine sulfoxide reductase MsrA n=2 Ta... [more]
A0A7Y5WV21_9BACT1.330e-8163.30Peptide methionine sulfoxide reductase MsrA n=1 Ta... [more]
A0A6J4QBN3_9ACTN1.490e-8158.25Peptide methionine sulfoxide reductase MsrA n=1 Ta... [more]
A0A534XQG8_9DELT2.540e-8160.94Peptide methionine sulfoxide reductase MsrA n=7 Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002569Peptide methionine sulphoxide reductase MsrA domainPFAMPF01625PMSRcoord: 95..247
e-value: 1.1E-64
score: 217.3
IPR002569Peptide methionine sulphoxide reductase MsrA domainTIGRFAMTIGR00401TIGR00401coord: 94..247
e-value: 8.3E-65
score: 215.8
IPR002569Peptide methionine sulphoxide reductase MsrA domainHAMAPMF_01401MsrAcoord: 92..253
score: 37.742966
IPR036509Peptide methionine sulphoxide reductase MsrA superfamilyGENE3D3.30.1060.10Peptide methionine sulphoxide reductase MsrAcoord: 50..259
e-value: 6.9E-84
score: 282.4
IPR036509Peptide methionine sulphoxide reductase MsrA superfamilySUPERFAMILY55068Peptide methionine sulfoxide reductasecoord: 56..257
NoneNo IPR availablePANTHERPTHR42799MITOCHONDRIAL PEPTIDE METHIONINE SULFOXIDE REDUCTASEcoord: 89..252
NoneNo IPR availablePANTHERPTHR42799:SF2MITOCHONDRIAL PEPTIDE METHIONINE SULFOXIDE REDUCTASEcoord: 89..252

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_3404contigScGOVlb_3404:3771036..3772128 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi12183.t1Gvermi12183.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_3404 3771036..3772128 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi12183.t1 ID=Gvermi12183.t1|Name=Gvermi12183.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=261bp
LRPKAIPFAKMPTTFVPPLPVALRPLRHNTSPVRPGKRFVQAAMGPFVWF
QNLMRPATTTKSMTATPIAPPARHVVLGTPIAPPPGGWKPPLHEAMFGLG
CFWGAERKFWQMEGIYTTSVGYAGGETEFPTYRQVCTGRTNHAEVVNVVY
DTSKTSYEDLLNVFWAAHDPTQKNRQGNDVGTQYRSVIYYYNDEQKKAAE
ETRNHFNAILKEAGRNGVATEIQPAPQYFYAEEYHQQYLHKNPMGYCGLG
GTGLYTPRKN*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002569Met_Sox_Rdtase_MsrA_dom
IPR036509Met_Sox_Rdtase_MsrA_sf