Gvermi12172.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi12172.t1
Unique NameGvermi12172.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length542
Homology
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BLAST of Gvermi12172.t1 vs. uniprot
Match: A0A2V3J5U7_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J5U7_9FLOR)

HSP 1 Score: 547 bits (1409), Expect = 3.950e-188
Identity = 285/539 (52.88%), Postives = 375/539 (69.57%), Query Frame = 0 
Query:    8 GPPPVPDSIKQLDMLEFHRRQAAEPMPSLPPEVLQAIRERYPRIKKLDQVMEREMSRDDYDINDHRVCSWAYEYLRPWAMGRPLQALIACSTAYSTVKLVQYVKSRVSQTVLMSALVSVDTFFTVALGAVFPAFLLSWALHRARFNDVRTDGVRRSVFMFCLTALTLPGVWAMAATTNVSLAMVSSVFVRCMLFVPIWGWLDLRREATLGELPLAKLFKVWRVLATVAVLFYGSILRLLTMFVPQDFPA-HFFARRADLLRRALWKTFPVSCSLCNDPRGLFLLGSLVVAGLAIYALYLIVFVTDCCRIRCHRECESVLTSFCVGKGIYQPNRHPDEIRSSLSAPDPDETFLPSRPMMLRPDEDQLATNSGVMADKVLPVFAYLDREKEIMKQTGVTEWMKYRSEQIPAHTEEEKEERDRKALLSWAKALQPEDEKLSIEDYFQTVEDDEYFYDPTTGNWLFVE--GPEGQKGDKDKGNENTQNGIDLQAEDE--LEIPPEWEPIVQRMLDRNNGEGEDESADSRDDEDAGSASASVYV 541
            GPPP+PDSIK+LD  E  RRQ   P P LPP   +++ ++YP ++K+ + M REM+ DDYD  D+RV SWAY+ LRP A+G PL +LI  +TA++ VKL+QY+++ + + +L + LV+ DT  T  L    P  LLSWA  +A FNDVRTDGVRRSV MFCLTAL LP VWAM+ATTNV+L +  ++FVR ML   IWGW+DLRREA LG+  LA+++K WR   TV VL +GS+LR +    P + P    F R A+ LR+AL K FPV+CSLCNDPRGLFL G L +  L  Y LYL VFVT+  +I CHR CES LTS  V KGIYQPNRHPDE + SLSAPDP  +F PS  MMLRP +D  ++    ++   +PVFAYL +E+E+MK TG+TEW+K RSEQ+PA+ +E + ERD  ALLSWA+ L+PE+E+LSI+DY QTVEDDEY YDPTTGNW+F +     G++ D      +     +L  E++  +EIPPEWEP+V+RML++N     +   D + D+D+ S   S++ 
Sbjct:    3 GPPPIPDSIKRLDEFELERRQKPMPNP-LPPHFFESLFDQYPSVRKVHEAMTREMASDDYDPEDYRVYSWAYQQLRPTAIGLPLLSLIVGTTAFAIVKLIQYIRANLEKQILANMLVTADTVATGVLTGFIPVILLSWAWQKAHFNDVRTDGVRRSVTMFCLTALALPAVWAMSATTNVTLGIACALFVRFMLAFSIWGWVDLRREAFLGDALLARVYKAWRSCLTVGVLIFGSLLRSMAFLAPHEVPVKEVFGRHANSLRQALGKRFPVACSLCNDPRGLFLAGGLAIIALVSYVLYLAVFVTEFYQINCHRRCESPLTSLFVKKGIYQPNRHPDESKGSLSAPDPSMSFHPSPAMMLRPTKDWDSSTVQPLSGTNMPVFAYLKKEEEVMKTTGLTEWLKPRSEQVPAYDDESRMERDLDALLSWARPLKPEEEELSIDDYVQTVEDDEYMYDPTTGNWIFTDDLAESGKRKDGMDDRSDKMQPFELNGEEDEMVEIPPEWEPLVKRMLEKNAEHPFENQDDQQVDDDSDSPPVSIFA 540
The following BLAST results are available for this feature:
BLAST of Gvermi12172.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3J5U7_9FLOR3.950e-18852.88Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 466..541
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 287..309
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 182..186
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 310..541
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 209..227
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 187..208
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..117
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 251..286
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 144..163
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 164..181
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 118..143
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 228..250
NoneNo IPR availableTMHMMTMhelixcoord: 128..147
NoneNo IPR availableTMHMMTMhelixcoord: 186..208
NoneNo IPR availableTMHMMTMhelixcoord: 287..309
NoneNo IPR availableTMHMMTMhelixcoord: 228..250
NoneNo IPR availableTMHMMTMhelixcoord: 160..182

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_3404contigScGOVlb_3404:3659692..3661317 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi12172.t1Gvermi12172.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_3404 3659692..3661317 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi12172.t1 ID=Gvermi12172.t1|Name=Gvermi12172.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=542bp
MDFASRVGPPPVPDSIKQLDMLEFHRRQAAEPMPSLPPEVLQAIRERYPR
IKKLDQVMEREMSRDDYDINDHRVCSWAYEYLRPWAMGRPLQALIACSTA
YSTVKLVQYVKSRVSQTVLMSALVSVDTFFTVALGAVFPAFLLSWALHRA
RFNDVRTDGVRRSVFMFCLTALTLPGVWAMAATTNVSLAMVSSVFVRCML
FVPIWGWLDLRREATLGELPLAKLFKVWRVLATVAVLFYGSILRLLTMFV
PQDFPAHFFARRADLLRRALWKTFPVSCSLCNDPRGLFLLGSLVVAGLAI
YALYLIVFVTDCCRIRCHRECESVLTSFCVGKGIYQPNRHPDEIRSSLSA
PDPDETFLPSRPMMLRPDEDQLATNSGVMADKVLPVFAYLDREKEIMKQT
GVTEWMKYRSEQIPAHTEEEKEERDRKALLSWAKALQPEDEKLSIEDYFQ
TVEDDEYFYDPTTGNWLFVEGPEGQKGDKDKGNENTQNGIDLQAEDELEI
PPEWEPIVQRMLDRNNGEGEDESADSRDDEDAGSASASVYV*
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