Gvermi12167.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi12167.t1
Unique NameGvermi12167.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length747
Homology
BLAST of Gvermi12167.t1 vs. uniprot
Match: A0A7J7QAG1_9CHLO (Uncharacterized protein n=1 Tax=Scenedesmus sp. NREL 46B-D3 TaxID=2650976 RepID=A0A7J7QAG1_9CHLO)

HSP 1 Score: 167 bits (422), Expect = 2.740e-42
Identity = 119/354 (33.62%), Postives = 175/354 (49.44%), Query Frame = 0
Query:  398 SATELKELGNEKFKAGMYEFAVSFYEAALLVGPSNESDHVNILCNLSLCYLRKEEWKQAAKAANDALAVNPNAEKALMRRAQAYIRLKKFKDAHADVHRLQSIPRVPWKEMKAISDELKHAMNPAKAERENGSHEQS--------SEAQSANGVPVNLDRPVKPWYNGLDQNKRYEWLVDCYRMRLDDEHCWGGELRC--GSLYDPDRTADSMTADFLVFCKLVVAKGALPDTWDWRQFLNHAIDPLHFPFEKSDAEEKYGSEVFFEGLGFLGSGRSLRFTAKEVYVSDVTNRDEKCEEYNAMCDLVHCRCFHDTEEVINFRRAK----------PLFVDVGGMDVWREFLQSM 731
            +A E KELGN  +K+  Y+ A   Y  A+ +  S+      +  N S  YL+  + + A + A  A ++ P+ EK   R   A   L    +A   +   QS       +    + E+   +   K +++  + +Q         S   S   V V   R    W +GL   ++ EWLVDCYRMR+DD++C GG L C    LYDPD T D++  DFL+FCKL V  GALP  WDW   L  A   L   FEKSDA++KYGSE  F G+  +  GRSLR+TA+ VY +D  +RD   +E +A       R  ++ E++      K           LF DVGG+ +W++  +++
Sbjct:    5 AAAEYKELGNINYKSKAYQQAADLYTKAIELDLSSAV----LYSNRSSAYLQLGDLRLALEDARKATSLKPDWEKGWFRTGAALQELGWLDEA---LRAYQSAL-----DCSPANQEIVSTIRALKVQQDALTKQQQXXXXXXXXSRLMSTAYVGV---RDPAAWADGLTPAQQTEWLVDCYRMRVDDDYCQGGCLTCYLHGLYDPDATNDTVAEDFLIFCKLTVKAGALPQLWDWHALLRKAQALLPHAFEKSDAQDKYGSENIFAGM--ILPGRSLRYTAQVVYGTDCFSRDSAADEVSA-------RLANEAEQLRALVMGKWGSLVEGQGSSLFDDVGGVQLWQQLHRNL 334          
BLAST of Gvermi12167.t1 vs. uniprot
Match: A0A812Y7F8_SYMPI (Hypothetical protein n=1 Tax=Symbiodinium pilosum TaxID=2952 RepID=A0A812Y7F8_SYMPI)

HSP 1 Score: 161 bits (408), Expect = 7.640e-39
Identity = 90/218 (41.28%), Postives = 124/218 (56.88%), Query Frame = 0
Query:  514 ELKHAMNPAKAERENGSHEQSSEAQSANGVPVNLDRPVKPWYNGLDQNKRYEWLVDCYRMRLDDEHCWGGELRCGSLYDPDRTADSMTADFLVFCKLVVAKGALPDTWDWRQFLNHAIDPLHFPFEKSDAEEKYGSEVFFEGLGFLGSGRSLRFTAKEVYVSDVTNRDEKCEEYNAMCDLVHCRCFHDTEEVINFRRAKPLFVDVGGMDVWREFLQSM 731
            EL H    A   R   S + + E  +  G P   +R    W  GL + K+ EWLVDCYRMRLDD++ WGG      LYDPD T  ++  DFLVFCKL V +G LP+ WDW+  L  A   L F FEKSDA+EK+G E FF  +  +G GRSLRFT + +Y + + N+ +   E++ + DL  C       +   F++   LF DVGG + W + L+++
Sbjct:    2 ELDHKEARALLARLAPSSKPAEERPAQCGPPAVPNRTA--WAAGLSKEKQQEWLVDCYRMRLDDDYAWGG-CNLHGLYDPDHTPATILQDFLVFCKLAVLRGVLPNLWDWQGLLQRASKLLPFAFEKSDAKEKWGGENFFAAM--MG-GRSLRFTGEVIYGTSMQNQFDTDPEHSRLEDL--CESMPRRADSAKFQQKAKLFADVGGHEAWLKLLETL 211          
BLAST of Gvermi12167.t1 vs. uniprot
Match: A0A6B2LH16_9EUKA (Uncharacterized protein n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2LH16_9EUKA)

HSP 1 Score: 145 bits (365), Expect = 4.350e-36
Identity = 79/182 (43.41%), Postives = 104/182 (57.14%), Query Frame = 0
Query:  554 WYNGLDQNKRYEWLVDCYRMRLDDEHCWGGELRCGSLYDPDRTADSMTADFLVFCKLVVAKGALPDTWDWRQFLNHAIDPLHFPFEKSDAEEKYGSEVFFEGLGFLGSGRSLRFTAKEVY---VSDVTNRDEKCEEYNAMCDLVHCRCFHDTEEVINFRRAKPLFVDVGGMDVWREFLQSMR 732
            W  GL  +KRYEWLVDCYRMR+DDE C  G +  G LYDPD T  S+ ADF +FCKL   + A+P  W+W+ FL  A   + + FEKSDA+EKYGSE  F     L  GRSLR T + +Y   V D  N D   +    + + +      D+ +V     AK  F D+GG + W  F +S++
Sbjct:   31 WQRGLSVSKRYEWLVDCYRMRVDDE-CINGGITNGCLYDPDHTKLSVVADFFIFCKLASLRKAIPSQWNWKDFLKVAEGLIPYAFEKSDAQEKYGSENVFS---VLTGGRSLRATGEAIYNRSVMDTVNYDGDHQRLQEVVEEIF-----DSSKVF-LEHAKE-FEDIGGSNTWSNFYKSLK 201          
BLAST of Gvermi12167.t1 vs. uniprot
Match: A0A7S4LL35_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4LL35_9EUGL)

HSP 1 Score: 143 bits (360), Expect = 9.760e-36
Identity = 77/177 (43.50%), Postives = 106/177 (59.89%), Query Frame = 0
Query:  556 NGLDQNKRYEWLVDCYRMRLDDEHCWGGELRCGSLYDPDRTADSMTADFLVFCKLVVAKGALPDTWDWRQFLNHAIDPLHFPFEKSDAEEKYGSEVFFEGLGFLGSGRSLRFTAKEVYVSDVTNRDEKCEEYNAMCDLVHCRCFHDTEEVINFRRAKPLFVDVGGMDVWREFLQSMR 732
            +GL   +R EWLVDCYR+R+DD++CWGG    G LYDP  T  ++  DFL+FCKL   +GALP  WDW+ FL  A++ + + FEKSDA++KYGSE  F  +     GRSLRFT + VY S      E+ ++++ +   V  R F   E       A  +F DVGG  +W+ F   +R
Sbjct:    1 SGLGAGQRVEWLVDCYRLRVDDDYCWGGGNLHG-LYDPRATKLTVAQDFLIFCKLAHERGALPTPWDWKCFLEKALELVPYAFEKSDAQDKYGSENVFAAMT---GGRSLRFTGEVVYGSGCCG--EQGDDHSRIEKEV-IRLFKGREADAFQGAAAGVFADVGGAALWKTFYTRLR 170          
BLAST of Gvermi12167.t1 vs. uniprot
Match: A0A7S4P101_GUITH (Hypothetical protein n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4P101_GUITH)

HSP 1 Score: 145 bits (367), Expect = 6.420e-35
Identity = 113/349 (32.38%), Postives = 166/349 (47.56%), Query Frame = 0
Query:  407 NEKFKAGMYEFAVSFYEAALLVGPSNESDHVNILCNLSLCYLRKEEWKQAAKAANDALAVNPNAEKALMRRAQAYIRLKKFKDAHADVHRLQSIPRVPWKEMKAISDELKHAMNPAKAERENGSHEQSSEAQSANGVPVN---------LDRPVKP--WYNGLDQNKRYEWLVDCYRMRLDDEHCWGG----ELRCGSLYDPDRTADSMTADFLVFCKLVVAKGALPDTWDWRQFLNHAIDPLHFPFEKSDAEEKYGSEVFFEGLGFLGSGRSLRFTAKEVYVSD-------VTNRDEKCEEYNAMCDLVHCRCFHDTEEVINFRRAKPLFVD-VGGMDVWREFLQSMR 732
            N+ FKAG +E AV  Y  A+     NE     +  N S   L  +   +A + A+  + + P+  K   RR++ +    +F+ A A + +   +     +  + + D  K A + + A  E    +   +A   +    +          D+ + P  W  GL   ++  WLVDCYRMR DD++ WGG     L C S   P      +  DFLVFCKL V    +P+ WDW++FL  A DPL F FEK DA+EKYGSE  F G   LG GRSLRFTA+ VY S        V++R ++  E              D E     + +K  F D VGG ++W +F ++M+
Sbjct:    1 NDAFKAGRFEEAVKLYSRAIEEEGQNEV----LYSNRSASLLALKRHDEARRDADKCIELKPDWAKGHYRRSRVHEENNEFELAVACMRKALELDPSNNEIQRRLKDLNKMAKSASAAIDEENIRKMFEKAGMKSDTDSDTDEEDNKRHFDKDINPQGWAKGLTPEEQRIWLVDCYRMRADDDYVWGGCFLHGLYCTSGKQP------IVEDFLVFCKLAVEHKVVPEKWDWKKFLETAKDPLRFAFEKEDAKEKYGSENVFAGA--LG-GRSLRFTAEFVYGSSCMAGMMGVSDRHQELLEQA------------DGEWRTLSKPSKAAFFDDVGGQNIWIDFFRNMK 324          
BLAST of Gvermi12167.t1 vs. uniprot
Match: R1E8A8_EMIHU (Uncharacterized protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1E8A8_EMIHU)

HSP 1 Score: 148 bits (374), Expect = 6.390e-34
Identity = 121/373 (32.44%), Postives = 172/373 (46.11%), Query Frame = 0
Query:  373 MPEADTNQELGNSTFVKRATGILGKSATELKELGNEKFKAGMYEFAVSFYEAALLVGPSNESDHVNILCNLSLCYLRKEEWKQAAKAANDALAVNPNAEKALMRRAQAYIRLKKFKDAHADVHRLQSIPRVPWKEMKAISDELKHAMNP----------AKAERENGSHEQSSEAQSANGVPVNLDRPVKPWYNGLDQNKRYEWLVDCYRMRLDDEHCWGG-ELRCGSLYDPDRTADS-MTADFLVFCKLVVAKGALPDTWDWRQFLNHAIDPLHFPFEKSDAEEKYGSEVFFEGLGFLGSGRSLRFTAKEVYVSDVTNRDEKCEEY--NAMCDLVHCRCFHDTEEVINFRRAKPLFVDVGGMDVWREFLQSM 731
            M E  T  E  N+    RA G    SA E ++                   AA        +    I  NL+ C L+ E+W+ AA AA+DALA+ P   K+L+RRA+A +RL + + A  D+   Q   R       A +     A+            A A R   + +Q+   ++  G   ++      W +GL   +++EWL+DCYRMR+DD+ CWGG +LR   LY      DS +T DF+VFCKL V    +P  WDW  FL  A   L + FEK+DA+EK+G E  F     L  GRSLR TA+ VY +        C+E   +A    +  RC H            P + DVGG   W+   +++
Sbjct:   15 MDEGMTAAESANALDAARAEGRRVGSAAEERQ------------------RAADRAAKERRTRAAKICSNLAECRLKLEQWEAAAAAASDALALVPTHAKSLVRRAKAAVRLGEVEAAANDLR--QEAKRKEAARNNAFAAGFAGALGXXXXXXXDVPNAAAPRFPRAPDQAR-GETMGGQMHDMGLQATAWAHGLGVAQQHEWLLDCYRMRVDDDMCWGGGQLR--GLYGKQAGEDSSITTDFMVFCKLAVRHDVVPVGWDWPAFLRVAETLLPYAFEKADAKEKWGRENVF---AVLTGGRSLRATAEVVYANS-------CQEQGPSAAMRAMTRRCRHPG----------PEWHDVGGRHAWQALARAL 344          
BLAST of Gvermi12167.t1 vs. uniprot
Match: A0A812R138_9DINO (TOMM34 protein n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812R138_9DINO)

HSP 1 Score: 142 bits (358), Expect = 1.930e-31
Identity = 115/351 (32.76%), Postives = 155/351 (44.16%), Query Frame = 0
Query:  391 ATGILGKSATELKELGNEKFKAGMYEFAVSFYEAALLVG---PSNES-----DHVNILCNLSLCYLRKEEWKQAAKAANDALAVNPNAEKALMRRAQAYIRLKKFKDAHADVHRLQSIP------RVPWKEMKAISDELKHAMNPAKAERENGSHEQSSEAQSANGVPVNLDRPVKPWYNGLDQNKRYEWLVDCYRMRLDDEHCWGGELRCGSLYDPDRTADSMTADFLVFCKLVVAKGALPDTWDWRQFLNHAIDPLHFPFEKSDAEEKYGSE-VFFEGLGFLGSGRSLRFTAKEVYVSDVTNRDEKCEEYNAMCDLVHCRCFHDTEEVINFRRAKPLFVDVGGMDVWRE 726
            A+ + GKS   LK   NE F  G    A+  Y  +L      PS+E      +   +  N + CYLR   W++A +AA  AL  +  + KAL RRA+A+  L +   A  D+     I       R   KE+                              S     + LD     W  GL    + EWLVDCYRMR+DDE+ WG    C   Y  + T +     FL FCKL V  G +P+ W+WR F+  A   L + FEKSDA++KYGSE VF   LG    GRSLR TA+ VY S      ++ E    +            +++        LFVD+GG +VW E
Sbjct:  369 ASCLKGKS---LKAKANEAFGHGDLPRALELYGQSLRSFQKCPSHEQPLVKEEEAKVHGNRAECYLRLTRWQEAVEAAGAALENDGRSVKALFRRAKAHKELVERSSAIKDLKLALRIDGSNAAVRGLLKELXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDSKEVPHLGLD--AASWATGLSPAMQQEWLVDCYRMRIDDEYVWG----CSGRYSVNSTVN-----FLHFCKLAVKNGVIPNNWEWRAFVRKARQLLPYAFEKSDAQDKYGSENVFMAALG----GRSLRLTAEIVYGSSCMMGSQEDEASRRL-----------RQKLRRGALESSLFVDIGGQEVWEE 690          
BLAST of Gvermi12167.t1 vs. uniprot
Match: A0A7S3QRU5_DUNTE (Hypothetical protein (Fragment) n=1 Tax=Dunaliella tertiolecta TaxID=3047 RepID=A0A7S3QRU5_DUNTE)

HSP 1 Score: 135 bits (341), Expect = 1.960e-31
Identity = 101/302 (33.44%), Postives = 143/302 (47.35%), Query Frame = 0
Query:  390 RATGILGKSATELKELGNEKFKAGMYEFAVSFYEAALLVGPSNESDHVNILCNLSLCYLRKEEWKQAAKAANDALAVNPNAEKALMRRAQAYIRLKKFKDAHADVHRLQSIPRVPWKEMKAISDELKHAMNPAKAERENGSHEQSSEAQSANGVPVNLDRPVKP--------WYNGLDQNKRYEWLVDCYRMRLDDEHCWGGELRCGSLYDPDRTADS-----MTADFLVFCKLVVAKGALP-DTWDWRQFLNHAIDPLHFPFEKSDAEEKYGSEVFFEGLGFLGSGRSLRFTAKEVYVSDV 677
            R +  L  SA ELKE GN+ F  G +  A   Y  A+ + P N      +  N S   L+  E + A K A+ A+ +NP+ +K   R+  A       + A  D+  L +       E    + EL   +   K ++   + ++    +   G P N++    P        W  GL    +YEWL DCYRMR+DDE  + G LR   LYD + T        +   FLVFCKL    G LP + WDW+ FL H  D L + FEK DA++K+G E +F    F G GRSLR T + +Y + V
Sbjct:   21 RESHSLQMSAQELKEAGNKHFGDGEWSQAKDLYTQAIALDPHNAV----LFSNRSAAALQLAELEDAVKDADKAIELNPSWDKGYYRKGCA------LEAAGKDMEALAAYRSAL--ERNNENGELHRLVRKMK-QKTGTTGKEHKRKEKPGGFPFNIETTSGPMQKPRPSSWARGLSIKDQYEWLCDCYRMRIDDEMVYQGNLR--GLYDMNVTDKQKRKVLVIEHFLVFCKLAKLMGVLPPEGWDWKAFLMHRADNLPYAFEKDDAKQKWGGENYFSA--FTG-GRSLRATGETIYGTQV 304          
BLAST of Gvermi12167.t1 vs. uniprot
Match: A0A813KJI5_POLGL (Hypothetical protein n=2 Tax=Polarella glacialis TaxID=89957 RepID=A0A813KJI5_POLGL)

HSP 1 Score: 135 bits (341), Expect = 7.830e-31
Identity = 84/192 (43.75%), Postives = 105/192 (54.69%), Query Frame = 0
Query:  536 EAQSANGVPVNLDRPVKPWYNGLDQNKRYEWLVDCYRMRLDDEHCWGGELRCGSLYDPDRTADSMTADFLVFCKLVVAKGALPDTWDWRQFLNHAIDPLHFPFEKSDAEEKYGSE-VFFEGLGFLGSGRSLRFTAKEVYVSDVTNRDEKCEEYNAMCDLVHCRCFHDT-EEVINFRRAKPLFVDVGGMDVWR 725
            +AQ+   +P +L  P   W NGL  + + EWLVDCYRMR+DD++ WGG    G          S+  DFL+FCKL V K  +P  WDW  FL  A D L + FEK DA+EKYGSE VF   +G    GRSLR+TA+ VY S         EE +A+ +L       DT E   N  R    F DVGG+  WR
Sbjct:  150 QAQAPGTIPSSLPEP-SAWANGLSPSMQREWLVDCYRMRVDDDYAWGGGNLRGLYNVTAGGGGSVAQDFLLFCKLAVRKAVIPPNWDWAAFLVTAEDLLRYAFEKEDAQEKYGSENVFNAAMG----GRSLRYTAEIVYGSSCM----AMEESDAVQEL------EDTIERSFNNERV---FDDVGGVVAWR 323          
BLAST of Gvermi12167.t1 vs. uniprot
Match: A0A2P6TFJ8_CHLSO (tRNA pseudouridine synthase n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TFJ8_CHLSO)

HSP 1 Score: 140 bits (352), Expect = 1.820e-30
Identity = 121/403 (30.02%), Postives = 178/403 (44.17%), Query Frame = 0
Query:  349 KHEDGHASAISQLHNLAMKLSDLTMPEADTNQELGNSTFVKRATGILGKSATE---LKELGNEKFKAGMYEFAVSFYEAALLVGPSNESDHVNILCNLSLCYLRKEEWKQAAKAANDALAVNPNAEKALMRRAQAYIRLKKFKDAHADVHRLQSIPRVPWKEMKAISDELKHAMNPAKAERENGSHEQSSEAQSANGVPVN--------------LDRPVKPWYNGLDQNKRYEWLVDCYRMRLDDEHCWGGELRCGSLYDPDRTA--DSMTADFLVFCKLVVAKGALPDT-WDWRQFLNHAIDPLHFPFEKSDAEEKYGSE-VFFEGLGFLGSGRSLRFTAKEVYVSDVTNRDEKCEEYNAMCDLVHCRCFHDTEEVINFRRAKP-LFVDVGGMDVWREFLQ 729
            +H D H + + +L +     + LT    D N  L        A  +L     +    K L N  F+ G +  A + Y  AL   P + +    +  N S   L+  +   A   A  A+ + P+ +KA  R   A  +L +   A         I        + +SD ++      + E+      Q++      G P                +      W  GL + KRYEWLVDCYRMR+DDE+ W GE R   LY        + +  DFL+FCKL VA G +P   WDW +FL  A D L + FEKSDA +K+G E +F   +G    GRSLR TA+ V+ S +++    C    A  DL++ R      E++  +   P +F DVGG  VWR+ L+
Sbjct:  161 RHLDLHHNLLFRLPSTISMATGLTQLRLDDNVTL--MLLPSDAPVLLALPQLQWLSCKRLRNSLFREGKFPEAAAKYAEALEQDPEDAA----LYSNRSAARLKAGQAADALADAQAAIMLRPDWDKAHFRLGCALEQLGQLDQALEAFEAGLDINS----SSRELSDRVRQLKKRMRQEQ------QAAGGLGGPGAPAXXXXXXXXXXXXXGVMSGGATGWAAGLSEAKRYEWLVDCYRMRVDDEYAWQGEAR--GLYGAQAGGCKEDVVEDFLIFCKLAVANGVVPQQHWDWGKFLRIAADLLPYAFEKSDASDKWGGENIFAAAMG----GRSLRATAEVVFGSGLSSH---CGPSEAEQDLIY-RIQDQLHELLAGQGEGPAMFADVGGQAVWRKLLK 537          
The following BLAST results are available for this feature:
BLAST of Gvermi12167.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7J7QAG1_9CHLO2.740e-4233.62Uncharacterized protein n=1 Tax=Scenedesmus sp. NR... [more]
A0A812Y7F8_SYMPI7.640e-3941.28Hypothetical protein n=1 Tax=Symbiodinium pilosum ... [more]
A0A6B2LH16_9EUKA4.350e-3643.41Uncharacterized protein n=1 Tax=Arcella intermedia... [more]
A0A7S4LL35_9EUGL9.760e-3643.50Hypothetical protein n=1 Tax=Eutreptiella gymnasti... [more]
A0A7S4P101_GUITH6.420e-3532.38Hypothetical protein n=1 Tax=Guillardia theta TaxI... [more]
R1E8A8_EMIHU6.390e-3432.44Uncharacterized protein n=1 Tax=Emiliania huxleyi ... [more]
A0A812R138_9DINO1.930e-3132.76TOMM34 protein n=1 Tax=Symbiodinium natans TaxID=8... [more]
A0A7S3QRU5_DUNTE1.960e-3133.44Hypothetical protein (Fragment) n=1 Tax=Dunaliella... [more]
A0A813KJI5_POLGL7.830e-3143.75Hypothetical protein n=2 Tax=Polarella glacialis T... [more]
A0A2P6TFJ8_CHLSO1.820e-3030.02tRNA pseudouridine synthase n=1 Tax=Chlorella soro... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019734Tetratricopeptide repeatSMARTSM00028tpr_5coord: 399..432
e-value: 0.091
score: 21.9
coord: 437..470
e-value: 0.18
score: 20.9
coord: 292..325
e-value: 0.0047
score: 26.2
coord: 471..504
e-value: 310.0
score: 1.8
coord: 250..283
e-value: 430.0
score: 0.6
IPR019734Tetratricopeptide repeatPFAMPF13176TPR_7coord: 295..324
e-value: 0.023
score: 14.7
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 399..432
score: 8.6734
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 292..325
score: 9.3224
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 437..470
score: 8.6144
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 238..377
e-value: 3.6E-21
score: 77.4
coord: 395..531
e-value: 1.1E-24
score: 88.9
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 390..499
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 250..370
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 518..543
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 518..532
NoneNo IPR availablePANTHERPTHR46014:SF1TETRATRICOPEPTIDE REPEAT PROTEIN 1coord: 194..339
coord: 381..532
NoneNo IPR availablePANTHERPTHR46014TETRATRICOPEPTIDE REPEAT PROTEIN 1coord: 194..339
coord: 381..532

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_3404contigScGOVlb_3404:3651945..3654185 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi12167.t1Gvermi12167.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_3404 3651945..3654185 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi12167.t1 ID=Gvermi12167.t1|Name=Gvermi12167.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=747bp
MPVHVLLIEGMSILNSNWYADQLIRTSPYLSPPACIVTRVSFDYGENTQA
VQLAMGLRHYNAIIVCDLSHDQNMFAIALGSCIQSYVRSGGRVAFPTTEG
LNLIPVLKELFDVPWTRSNYGREQWVASPQSAALLSEQFPLQDGQKAADL
QFYLKGCSYRNVPQSDRCFEAQQYQSEYGGRDSNSEYDASVADQDPLTLV
AVRSYYGGHVAYFGDVNCELPTAKLVGAFATAPQKCSPSSLENSEIMRRA
TEAKEEGNIQFRNAEYERALSFYISAQKHLDPITESCKEEYSKVLGNIAE
CWLRLNQWSEAIATSTKALQLHPSNAKAFYRRTRAYLMAARDDINVLKKH
EDGHASAISQLHNLAMKLSDLTMPEADTNQELGNSTFVKRATGILGKSAT
ELKELGNEKFKAGMYEFAVSFYEAALLVGPSNESDHVNILCNLSLCYLRK
EEWKQAAKAANDALAVNPNAEKALMRRAQAYIRLKKFKDAHADVHRLQSI
PRVPWKEMKAISDELKHAMNPAKAERENGSHEQSSEAQSANGVPVNLDRP
VKPWYNGLDQNKRYEWLVDCYRMRLDDEHCWGGELRCGSLYDPDRTADSM
TADFLVFCKLVVAKGALPDTWDWRQFLNHAIDPLHFPFEKSDAEEKYGSE
VFFEGLGFLGSGRSLRFTAKEVYVSDVTNRDEKCEEYNAMCDLVHCRCFH
DTEEVINFRRAKPLFVDVGGMDVWREFLQSMRRHVYRSYSRKKQGV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019734TPR_repeat
IPR011990TPR-like_helical_dom_sf