Gvermi12163.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi12163.t1
Unique NameGvermi12163.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length656
Homology
BLAST of Gvermi12163.t1 vs. uniprot
Match: A0A2V3J5J9_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J5J9_9FLOR)

HSP 1 Score: 884 bits (2284), Expect = 0.000e+0
Identity = 457/665 (68.72%), Postives = 539/665 (81.05%), Query Frame = 0
Query:    1 MGTNPPPTPSFLSRFRRFRNWTANSYSHSTLQLPHAISYPDSVR-STSAPPSSATSVRGSRHQTPPQVPPNHNNPIPP--NITKQPSSAPQRHQTHSSARDTD---GILRKV---RDLEAQLPHRSHRFKYNPQGLGQRLLVSARLKNKLETSKIIRMPYSKSYKYTLVCALLFTGAFLTPQMLPKWIGFEWASPEDLCQSPEAKLVHIQQQLVNLTSMRQSKHFLQQQQYTLDCMNRSAADFYHGHSGSPPRFLWPHECDSEKARVSLNETTCVEQKTNVCKRVNFFARIFASISGDCVQKVAPDLCVQSTNAERSESLYQLEKERNALQQNISELDTEPIVSTAESKISAVVTRLMTQIDLAADCFIVYSVVAVMVGIPLVVSKREKTSRVMSATLGLTKMTFVMVFVILLSLYDSFFLVFQDTDFPRLFQNFLNDPCYVNPAFSSKRVGMIVDMCNNISLIEQQSDYTLQRMDTVYYDARLFGHCKDDTRELAVHPKLEAMDEIRTLYREGNISNPGVCNATELDERTSIAPENERASKWKALLGSGVVAQLALKIIFTSWIIHLLAFMEPMVLHNGKVELWGMKPKMLLTVEDETAIRRFARDKHLLPLVVFSVLLVVELALFGYSIYTTINGAHEIATLNS-TLPLTPAPEWQCPSSLGM 655
            MG  PP     +SRF  +R       +   L LP AI +PD +  +  +  +S+ SVR S     P+    H     P  +   QP       Q   S  + D   GI+ +    RD+EAQ P +SHRFKY+P G GQRLLVS RLKNKLE+SKIIR+PY++S+KYTLV  LLFTGAFLTPQ+LPKWIGFEWASPEDLCQSP+ KL  I +Q++N+T +R +KHF++QQ+YTLDCMNRSAADFYHG +G PPRFLWP ECDSEKAR++LNETTCVEQKTN+CKRVNFFAR+F S+SG+CVQK  PDLCV+STNAERSESLYQLEKERNA +QN +++ TEPIV+TAESKIS ++ RLM Q+DLAADCFIVYSVV+V+VGIPLV+SKREKTSRV+ ATLGLTKMTFVMVF+ILLSLYDS FL+F+DTDFPR+FQNFLNDPCYVNP FS++RVGMIVD+CNNIS I+QQSDY LQRMD VYYD RLFGHCKDD RELAVHPKL+AMD+IR +YREGNISNPG+CNATELD RTS+APENER SKWKAL+GSGVVAQL LKI+FT WIIH L+F+EPMVLH+GKVELWG+K +  L+ EDE AIRRFARDKHLLPL+ FS LL +E+ALFGYSIYTTI+GA EI T N+ T+PLT  PE +CPS LG+
Sbjct:    1 MGATPPENSPKISRFLPWRRVP----NRRILSLPEAIPFPDRIAPNVGSSNASSPSVRFSNQSDGPRG--RHRMEEAPFSDAISQPFRRLPLLQNRGSESNFDHQKGIVEEPDNERDVEAQHPPQSHRFKYDPPGWGQRLLVSTRLKNKLESSKIIRVPYARSHKYTLVLTLLFTGAFLTPQLLPKWIGFEWASPEDLCQSPDDKLNEIHRQVLNMTLIRDAKHFIEQQEYTLDCMNRSAADFYHGKNGKPPRFLWPKECDSEKARMALNETTCVEQKTNICKRVNFFARLFVSVSGNCVQKTGPDLCVESTNAERSESLYQLEKERNAFEQNFTDIKTEPIVATAESKISQIINRLMLQVDLAADCFIVYSVVSVLVGIPLVISKREKTSRVVGATLGLTKMTFVMVFIILLSLYDSAFLIFRDTDFPRMFQNFLNDPCYVNPDFSARRVGMIVDVCNNISYIDQQSDYILQRMDRVYYDTRLFGHCKDDDRELAVHPKLKAMDKIRKMYREGNISNPGICNATELDTRTSVAPENERTSKWKALMGSGVVAQLLLKIVFTGWIIHFLSFIEPMVLHSGKVELWGVKSRTSLSEEDEKAIRRFARDKHLLPLIFFSTLLAIEIALFGYSIYTTISGAGEIQTHNNKTMPLTKPPELRCPSVLGL 659          
BLAST of Gvermi12163.t1 vs. uniprot
Match: R7QPE7_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QPE7_CHOCR)

HSP 1 Score: 384 bits (987), Expect = 2.450e-124
Identity = 201/439 (45.79%), Postives = 284/439 (64.69%), Query Frame = 0
Query:  227 MNRSAADFYHGHSGSPPRFLWPHECDSEKARVSLNETTCVEQKT-NVCKRVNFFARIFASISGDCVQKVAPDLCVQSTNAERSESLYQLEKERNALQQNISELDTEPIVSTAESKISAVVTRLMTQIDLAADCFIVYSVVAVMVGIPLVVSKREKTSRVMSATLGLTKMTFVMVFVILLSLYDSFFLVFQDTDFPRLFQNFLNDPCYVNPAFSSKRVGMIVDMCNNISLIEQQSDYTLQRMDTVYYDARLFGHCKDDTRELAVHPKLEAMDEIRTLYREGNISNPGVCNATELDERTSIAPENERASKWKALLGSGVVAQLALKIIFTSWIIHLLAFMEPMVLHNGKVELWGMKPK--------------MLLTVEDETAIRRFARDKHLLPLVVFSVLLVVELALFGYSIYTTINGAHEIATLNSTLPLTPAPEWQCP 650
            MN SA  FY     +P RF WPHEC  EKA  SL +  CV   T +VC  +    +IFAS++  C     P  CVQ+ ++ER+E L +LE+E NA   N +  +T+PIV TA  K++ ++ R++ Q+D+A+D +I YS+VA+++G+PL++ KREK SR++ AT G+TK+TF++V V+ LS+Y+SFFL+ ++TDF R+F+NF NDPCYV+  FS +RV +I+  CNN++ +   S YTLQ MD VY+  R F  CKD TRE + HP+   MD +R  YR+G+   PG CNAT LD  TS APE+   SK +ALLGSGVVAQL LK I TSW++H++A+ EPM++HNGKVE+W    K              M L   +  +  RFARDKHLLP +  S+L+V E+ L  YS+  T +G  ++ T      ++ A  + CP
Sbjct:    1 MNSSADTFYQ----APDRFQWPHECTPEKASDSLEDEVCVGPTTKSVCDDIGGIRKIFASLAQTCKSITVPKKCVQTVDSERTEELLRLEREENAQVFNKTATETQPIVQTANDKVTEILNRILVQVDIASDIYIAYSIVALIIGMPLIIYKREKGSRILGATFGMTKLTFIIVVVVFLSMYESFFLIMKETDFVRIFRNFRNDPCYVDGDFSRRRVNLIIHTCNNVTQLATNSTYTLQDMDGVYFTTRRFALCKDATREPSAHPRQGDMDSLRHSYRDGDKKFPGSCNATYLDSETSTAPEDPGFSKLQALLGSGVVAQLFLKFIVTSWLVHIMAYCEPMIMHNGKVEIWDTNRKPTEEKGGEEKDAQEMPLNEREAASATRFARDKHLLPAIFMSILMVGEVVLIAYSMVVTHSGRSDMLTTAGNTGMSTA--FTCP 433          
BLAST of Gvermi12163.t1 vs. uniprot
Match: A0A7S3LRQ6_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3LRQ6_9STRA)

HSP 1 Score: 77.8 bits (190), Expect = 3.530e-11
Identity = 70/280 (25.00%), Postives = 130/280 (46.43%), Query Frame = 0
Query:  322 QQNISELDTEPIVSTAESKISAVVTRLMTQIDLAADCFIVYSVVAVMVGIPLVVSKREKTSRVMSATLGLTKMTFVMVFVILLSLYDSFFLVFQDTDFPRLFQNFLNDPCYVNPAFSSKRVGMIVDMCNNISLIEQQSDYTLQRMDTVYYDAR--LFGHC----KDDTRELAVHPKLEAMDEIRTLYREGNISNPGVCNATELDERTSIAPENERASKWKALLGSGVVAQLALKIIFTSWIIHLLAFMEPMVLHNGKVELWGMKPKMLLTVEDETAIRRF 595
            Q  I+ L    +      +  +++ RLM QI+LA+D +I+YSV A+ V  P +V +    +R+      +++  F+++FV+ L  Y          +  + F N   D CY++  F       + + C    L +  S++TL  +D   ++A   L+  C    +D+  EL    K +A +   T+     + N  + +   L +  ++AP     + +  LL  GV+AQL  K I  ++   +   ++P+ +HNGKVE  G +  +    E E  +R +
Sbjct:  298 QSTINRLKVPEVSEALFEESKSLLERLMWQINLASDLYIIYSVFALFVISPFIVYQSSFKTRLKRQYFSISQGLFILLFVLFLWTYPYIQATINLENLLKYFHNINVDTCYIDGKFLRGVKNTVQEAC--FKLEQLNSNFTLASLDLQDFNASIDLYDQCNSAYQDEFPELYDKTKEKASEAQETVLL-AELCNQNIIS--NLVDANTVAPGVTETNVFGILLKLGVLAQLFAKFILVAFAKSVYQIVDPLAVHNGKVETIGKETPVPPASEVERFLRTY 572          
The following BLAST results are available for this feature:
BLAST of Gvermi12163.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2V3J5J9_9FLOR0.000e+068.72Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QPE7_CHOCR2.450e-12445.79Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A7S3LRQ6_9STRA3.530e-1125.00Hypothetical protein n=1 Tax=Aplanochytrium stocch... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 311..331
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 77..92
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 41..102
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 41..66
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 601..623
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 354..375
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 396..414
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 542..562
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 563..600
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 415..541
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 624..655
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..353
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 376..395
NoneNo IPR availableTMHMMTMhelixcoord: 354..376
NoneNo IPR availableTMHMMTMhelixcoord: 389..411
NoneNo IPR availableTMHMMTMhelixcoord: 601..623
NoneNo IPR availableTMHMMTMhelixcoord: 541..563

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_3404contigScGOVlb_3404:3641921..3643888 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi12163.t1Gvermi12163.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_3404 3641921..3643888 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi12163.t1 ID=Gvermi12163.t1|Name=Gvermi12163.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=656bp
MGTNPPPTPSFLSRFRRFRNWTANSYSHSTLQLPHAISYPDSVRSTSAPP
SSATSVRGSRHQTPPQVPPNHNNPIPPNITKQPSSAPQRHQTHSSARDTD
GILRKVRDLEAQLPHRSHRFKYNPQGLGQRLLVSARLKNKLETSKIIRMP
YSKSYKYTLVCALLFTGAFLTPQMLPKWIGFEWASPEDLCQSPEAKLVHI
QQQLVNLTSMRQSKHFLQQQQYTLDCMNRSAADFYHGHSGSPPRFLWPHE
CDSEKARVSLNETTCVEQKTNVCKRVNFFARIFASISGDCVQKVAPDLCV
QSTNAERSESLYQLEKERNALQQNISELDTEPIVSTAESKISAVVTRLMT
QIDLAADCFIVYSVVAVMVGIPLVVSKREKTSRVMSATLGLTKMTFVMVF
VILLSLYDSFFLVFQDTDFPRLFQNFLNDPCYVNPAFSSKRVGMIVDMCN
NISLIEQQSDYTLQRMDTVYYDARLFGHCKDDTRELAVHPKLEAMDEIRT
LYREGNISNPGVCNATELDERTSIAPENERASKWKALLGSGVVAQLALKI
IFTSWIIHLLAFMEPMVLHNGKVELWGMKPKMLLTVEDETAIRRFARDKH
LLPLVVFSVLLVVELALFGYSIYTTINGAHEIATLNSTLPLTPAPEWQCP
SSLGM*
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