Gvermi12158.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi12158.t1
Unique NameGvermi12158.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length248
Homology
BLAST of Gvermi12158.t1 vs. uniprot
Match: A0A2V3IY70_9FLOR (Vesicle transport protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IY70_9FLOR)

HSP 1 Score: 327 bits (837), Expect = 1.170e-110
Identity = 173/235 (73.62%), Postives = 204/235 (86.81%), Query Frame = 0
Query:   13 MGLLEGLNSLQGAPLPAPATSGAASASGDALASLSASAKSLFGDLSGSLXXXLESLNDKAKQSVGSVRRLMGDEAAGDEEAPAQMTLSDEINTMLNLSMVQRIGLFGMIFGTGVLLICMSFTFLPLIVVVPHKFAASFTLGNVLAITSTWVLVGPRAQIRNMFNPVRAVASAVYLASLVFTLLAAFFGGQLRYLLVMVALVAELASLIWYALSYIPYGRQMICRVVGVMGISFGS 247
            MGLLEGLNSLQG PLPAP+TS  + ++ D L+SLSASAKSLFGDLS +L   LE+LND AKQSV SVRR + DE   DEEAPAQ+TLS+EINTM NL+  QR+GLF MIFGTGVLLIC+SF FLPLI+VVPHKFAASFT+GN+LAI+STWVLVGP+AQ++NMFNPVRA A+ +YL SL F L AAFFGG+ RY+LV++ALVAE+ASL+WYALSYIPYGR MI R+VG+MG+SFGS
Sbjct:    1 MGLLEGLNSLQGPPLPAPSTSNTSHSATDPLSSLSASAKSLFGDLSHTLAPSLETLNDTAKQSVNSVRRFISDEPEHDEEAPAQVTLSEEINTMFNLTTFQRVGLFVMIFGTGVLLICLSFAFLPLILVVPHKFAASFTMGNILAISSTWVLVGPKAQLQNMFNPVRAAAAGIYLFSLFFALFAAFFGGKFRYVLVIMALVAEVASLVWYALSYIPYGRHMISRLVGMMGVSFGS 235          
BLAST of Gvermi12158.t1 vs. uniprot
Match: R7QLF8_CHOCR (Vesicle transport protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QLF8_CHOCR)

HSP 1 Score: 249 bits (636), Expect = 3.900e-80
Identity = 135/233 (57.94%), Postives = 176/233 (75.54%), Query Frame = 0
Query:   13 MGLLEGLNSLQGAPLPAPATSGAASASGDALASLSASAKSLFGDLSGSLXXXLESLNDKAKQSVGSVRRLMGDEAAG---DEEAPAQMTLSDEINTMLNLSMVQRIGLFGMIFGTGVLLICMSFTFLPLIVVVPHKFAASFTLGNVLAITSTWVLVGPRAQIRNMFNPVRAVASAVYLASLVFTLLAAFFGGQLRYLLVMVALVAELASLIWYALSYIPYGRQMICRVVGVMG 242
            MGLL+GL +LQGAP P+     +     DA+A LS  AKS FGD   S+   +++L D  K SV S+RR+MGDE+     + +   Q++ S+E+  M NLS  QRI LF M+FGTGVL++C+SF+FLP+IVVVPHKFAASFTLGN+LAI STW+LVGPRAQ++ MF+P RAVA+ +YLASL   L AAFFGG+LRY++V+VA+VAE+ SL+WYALSYIPYGR M+ R+ G+ G
Sbjct:    1 MGLLDGLQTLQGAP-PSRDAGTSDPPLNDAMAHLSTGAKSFFGDFGSSIGDGVDNLGDGVKSSVNSLRRMMGDESVDVDVEMQTTQQISFSEEMGAMFNLSWFQRIALFAMVFGTGVLMMCISFSFLPVIVVVPHKFAASFTLGNLLAIFSTWILVGPRAQLQAMFHPARAVAAGIYLASLFIALFAAFFGGKLRYIIVLVAVVAEICSLVWYALSYIPYGRHMMSRLFGLFG 232          
BLAST of Gvermi12158.t1 vs. uniprot
Match: A0A7S3EM37_9RHOD (Vesicle transport protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3EM37_9RHOD)

HSP 1 Score: 175 bits (443), Expect = 6.490e-51
Identity = 106/236 (44.92%), Postives = 150/236 (63.56%), Query Frame = 0
Query:   13 MGLLEGLNSLQGAPLPAPATSGAASASGDALASLSASAKSLFGDLSGSLXXXLESLNDKAKQSVGSVRRLMGDEAAGDE-------EAPAQMTLSDEINTMLNLSMVQRIGLFGMIFGTGVLLICMSFTFLPLIVVVPHKFAASFTLGNVLAITSTWVLVGPRAQIRNMFNPVRAVASAVYLASLVFTLLAAFFGGQLRYLLVMVALVAELASLIWYALSYIPYGRQMICRVVGVM 241
            MGLL+ +N+LQG  L      G A    D+L+    +A    G++   L    ES     K SV SVR  +GD+    +       E   Q T S+E+N +LNL+  QR+ LF M F  G +++C++  F+PLIVV P KFA SFT GNVLA+ STW LVGPRAQ+R+MF+P+RA A+A+Y+ SLV TL++ F   ++RY LV+ A+V E  SL+WYA+SYIPYGR +I +++ ++
Sbjct:    1 MGLLDNINNLQG--LQGFQREGVA----DSLSDFQNAAMKSLGNVGEKLGDLGESAAGTLKGSVYSVRNFIGDDGGPSDIESNRKPEEFQQQTTSEELNEILNLTWTQRLILFLMTFAAGAIMMCLAVMFIPLIVVKPAKFALSFTFGNVLAVISTWFLVGPRAQLRSMFDPIRAWAAALYVGSLVVTLISIFINSRIRYFLVLAAIVVEAISLVWYAMSYIPYGRTVISKLLNLI 230          
BLAST of Gvermi12158.t1 vs. uniprot
Match: A0A1X6NU77_PORUM (Vesicle transport protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NU77_PORUM)

HSP 1 Score: 176 bits (446), Expect = 7.510e-51
Identity = 95/180 (52.78%), Postives = 130/180 (72.22%), Query Frame = 0
Query:   68 LNDKAKQSVGSVRRLMG--DEAAGDEEAPA-----QMTLSDEINTMLNLSMVQRIGLFGMIFGTGVLLICMSFTFLPLIVVVPHKFAASFTLGNVLAITSTWVLVGPRAQIRNMFNPVRAVASAVYLASLVFTLLAAFFGGQLRYLLVMVALVAELASLIWYALSYIPYGRQMICRVVGV 240
            +ND  +    +V R++G  D A  D EA A     Q ++  EI  M NLS VQR+ LF M F  G ++I +SF FLP+I++ PHKFAA+FT GN+LAI STWV+VGPRAQ+ +MF+P RA A+A Y+ SL+F L AAFFGG+LRY LV+++LV E+ +L+WY+LSYIP+GRQ + R+ G+
Sbjct:   97 VNDAFRGGWAAVSRMVGADDGAPIDVEACANGNGGQQSVQQEIGEMFNLSWVQRLTLFVMCFSAGAVMIGLSFMFLPMILLKPHKFAAAFTAGNLLAIMSTWVIVGPRAQLASMFHPARATAAAAYIGSLIFALFAAFFGGRLRYPLVLISLVVEVLALVWYSLSYIPFGRQALSRLTGI 276          
BLAST of Gvermi12158.t1 vs. uniprot
Match: A0A7S1TI78_9RHOD (Vesicle transport protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TI78_9RHOD)

HSP 1 Score: 152 bits (383), Expect = 1.210e-41
Identity = 75/151 (49.67%), Postives = 110/151 (72.85%), Query Frame = 0
Query:   91 EEAPAQMTLSDEINTMLNLSMVQRIGLFGMIFGTGVLLICMSFTFLPLIVVVPHKFAASFTLGNVLAITSTWVLVGPRAQIRNMFNPVRAVASAVYLASLVFTLLAAFFGGQLRYLLVMVALVAELASLIWYALSYIPYGRQMICRVVGVM 241
            E+ PA  + ++E+    ++S+ QR+  F M FG G  +  MS  FLP IV+ P KFA SFT GN+L I STW LVGPRAQ+++MF+P R  A++VY+ SL+FTL+ AFFGG +RYLLV+++++ E+ +L+WY LSY+PYGR ++ R  G++
Sbjct:  106 EDIPAS-SWAEELGEFTSMSLTQRMAAFAMFFGAGGFMTFMSLLFLPTIVLHPAKFALSFTFGNLLCIASTWFLVGPRAQLQSMFDPSRRTAASVYVGSLLFTLIFAFFGGSMRYLLVLISVIIEVLALVWYTLSYVPYGRDILKRCCGLL 255          
BLAST of Gvermi12158.t1 vs. uniprot
Match: A0A5J4YSK3_PORPP (Vesicle transport protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YSK3_PORPP)

HSP 1 Score: 146 bits (369), Expect = 8.010e-40
Identity = 79/169 (46.75%), Postives = 112/169 (66.27%), Query Frame = 0
Query:   70 DKAKQSVGSVRRLMGDEAAGDEEAPAQMTLSDEINTMLNLSMVQRIGLFGMIFGTGVLLICMSFTFLPLIVVVPHKFAASFTLGNVLAITSTWVLVGPRAQIRNMFNPVRAVASAVYLASLVFTLLAAFFGGQLRYLLVMVALVAELASLIWYALSYIPYGRQMICRVV 238
            D   +    ++     E A D E   Q +L DE++  LN+S  QR+ LF M F  GV ++  +F +LP+IV+ P KF  +FT GNV+ ++ST  LVGP+AQ+  MF+PVRA A+  Y  ++ FTL A F GG LRYL+V+VAL+ E+ +L+WYALSYIPYGRQ+I  ++
Sbjct:   66 DSLHRGFTQLKTFWSSEPAFDPENQ-QQSLHDEMSEYLNMSYTQRLSLFVMCFAGGVAMLFFAFMWLPMIVLKPAKFGLAFTFGNVMCVSSTVFLVGPKAQLSAMFHPVRAYAAYAYCGAIAFTLFACFNGGSLRYLMVLVALIVEVLALLWYALSYIPYGRQLISSLI 233          
BLAST of Gvermi12158.t1 vs. uniprot
Match: A0A7S3EKT4_9RHOD (Vesicle transport protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3EKT4_9RHOD)

HSP 1 Score: 144 bits (363), Expect = 1.440e-38
Identity = 94/213 (44.13%), Postives = 130/213 (61.03%), Query Frame = 0
Query:   13 MGLLEGLNSLQGAPLPAPATSGAASASGDALASLSASAKSLFGDLSGSLXXXLESLNDKAKQSVGSVRRLMGDEAAGDE-------EAPAQMTLSDEINTMLNLSMVQRIGLFGMIFGTGVLLICMSFTFLPLIVVVPHKFAASFTLGNVLAITSTWVLVGPRAQIRNMFNPVRAVASAVYLASLVFTLLAAFFGGQLRYLLVMVALVAELAS 218
            MGLL+ +N+LQG  L      G A    D+L+    +A    G++   L    ES     K SV SVR  +GD+    +       E   Q T S+E+N +LNL+  QR+ LF M F  G +++C++  F+PLIVV P KFA SFT GNVLA+ STW LVGPRAQ+R+MF+P+RA A+A+Y+ SLV TL++ F   ++RY LV+ A+V E  S
Sbjct:    1 MGLLDNINNLQG--LQGFQREGVA----DSLSDFQNAAMKSLGNVGEKLGDLGESAAGTLKGSVYSVRNFIGDDGGPSDIESNRKPEEFQQQTTSEELNEILNLTWTQRLILFLMTFAAGAIMMCLAVMFIPLIVVKPAKFALSFTFGNVLAVISTWFLVGPRAQLRSMFDPIRAWAAALYVGSLVVTLISIFINSRIRYFLVLAAIVVEAIS 207          
BLAST of Gvermi12158.t1 vs. uniprot
Match: A0A443PHQ8_9MAGN (Vesicle transport protein n=1 Tax=Cinnamomum micranthum f. kanehirae TaxID=337451 RepID=A0A443PHQ8_9MAGN)

HSP 1 Score: 104 bits (260), Expect = 2.390e-24
Identity = 63/171 (36.84%), Postives = 103/171 (60.23%), Query Frame = 0
Query:   70 DKAKQSVGSVRRLMGDEAAGDEEAPAQMTLSDEINTMLNLSMVQRIGLFGMIFGTGVLLIC-MSFTFLPLIVVV-PHKFAASFTLGNVLAITSTWVLVGPRAQIRNMFNPVRAVASAVYLASLVFTLLAAFFGGQLRYLLVMVALVAELASLIWYALSYIPYGRQMICRVV 238
            DK  +++  ++ L+G +   +EEA A+ +L D+ N    L+M QR+      FG    L+  +S T L ++V   P KF  +FT GN+LA+ ST  L+GP+ Q+  M +PVR  A+A+Y+AS++  L  AF+      LL ++A+  E  +L+WY LSYIP+ R M+ +++
Sbjct:    2 DKMNKAMEKMKILVGMDVDDEEEAVAESSLIDDFNRQCTLTMKQRL------FGFATCLVAGLSCTLLSMLVFFNPIKFGITFTFGNLLALGSTAFLIGPKRQVTMMLDPVRIYATAIYIASMIIALFCAFYVHNK--LLTLLAITLEFGALVWYGLSYIPFARSMVSKIM 164          
BLAST of Gvermi12158.t1 vs. uniprot
Match: L1J0I0_GUITC (Vesicle transport protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1J0I0_GUITC)

HSP 1 Score: 105 bits (263), Expect = 4.920e-24
Identity = 62/147 (42.18%), Postives = 96/147 (65.31%), Query Frame = 0
Query:   89 GDEEAPAQMTLSDEINTMLNLSMVQRIGLFGMIFGTGVLLICMSFTFLPLIVVVPHKFAASFTLGNVLAITSTWVLVGPRAQIRNMFNPVRAVASAVYLASLVFTLLAAFFGGQLRYLLVMVALVAELASLIWYALSYIPYGRQMIC 235
            G ++ P   T+S+ ++  + LS  +R+  FG+   +G+    +S   LPLIV+ PHKFA +++LGN+L + ST  LVGP+ Q +NM+   RA+AS  Y  S+V T+ AA   G   Y+LV++ +  + A+LIWY+LSYIP+GR M+C
Sbjct:   92 GQQKEPE--TVSEYVDEAMTLSYKKRLIGFGICLLSGIFFTFLSTLMLPLIVIKPHKFAVAYSLGNLLMMLSTIFLVGPKKQCQNMWTGHRAMASIAYFGSMVGTIYAAM--GLRIYILVIIFVGIQFAALIWYSLSYIPFGRYMLC 234          
BLAST of Gvermi12158.t1 vs. uniprot
Match: A0A0D6R8J0_ARACU (Vesicle transport protein n=1 Tax=Araucaria cunninghamii TaxID=56994 RepID=A0A0D6R8J0_ARACU)

HSP 1 Score: 100 bits (249), Expect = 8.840e-23
Identity = 64/166 (38.55%), Postives = 99/166 (59.64%), Query Frame = 0
Query:   74 QSVGSVRRLMGDEAAGDEEAPAQMTLSDEINTMLNLSMVQRIGLFGMIFGTGVLLICMSFTFLPLIVVVPHKFAASFTLGNVLAITSTWVLVGPRAQIRNMFNPVRAVASAVYLASLVFTLLAAFFGGQLRYLLVMVALVAELASLIWYALSYIPYGRQMICRVVG 239
            +++G  R L+G E   +EE    M+L D+ +   NLS  QR+  F      G+LL  +S     L+ + P KFA +FT GN+L++ ST  LVGP  Q++ MF+PVR VASA+++ S+V  L  A +      LL ++A++ E  +L+WY+LSYIP+ R    + +G
Sbjct:    3 RAMGRFRSLVGGEDNNEEEE--DMSLMDDFSGHCNLSTEQRLYGFAACLAGGLLLTLLSL----LLFLHPIKFAVAFTFGNLLSLASTTFLVGPVRQMKMMFDPVRVVASAIFIGSIVIALFCALYIHNK--LLTLLAIIVEFCALLWYSLSYIPFARSAARKFMG 160          
The following BLAST results are available for this feature:
BLAST of Gvermi12158.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IY70_9FLOR1.170e-11073.62Vesicle transport protein n=1 Tax=Gracilariopsis c... [more]
R7QLF8_CHOCR3.900e-8057.94Vesicle transport protein n=1 Tax=Chondrus crispus... [more]
A0A7S3EM37_9RHOD6.490e-5144.92Vesicle transport protein n=1 Tax=Rhodosorus marin... [more]
A0A1X6NU77_PORUM7.510e-5152.78Vesicle transport protein n=1 Tax=Porphyra umbilic... [more]
A0A7S1TI78_9RHOD1.210e-4149.67Vesicle transport protein n=1 Tax=Compsopogon caer... [more]
A0A5J4YSK3_PORPP8.010e-4046.75Vesicle transport protein n=1 Tax=Porphyridium pur... [more]
A0A7S3EKT4_9RHOD1.440e-3844.13Vesicle transport protein n=1 Tax=Rhodosorus marin... [more]
A0A443PHQ8_9MAGN2.390e-2436.84Vesicle transport protein n=1 Tax=Cinnamomum micra... [more]
L1J0I0_GUITC4.920e-2442.18Vesicle transport protein n=1 Tax=Guillardia theta... [more]
A0A0D6R8J0_ARACU8.840e-2338.55Vesicle transport protein n=1 Tax=Araucaria cunnin... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007305Vesicle transport protein, Got1/SFT2-likePFAMPF04178Got1coord: 117..228
e-value: 1.7E-25
score: 89.7
IPR011691Vesicle transport protein SFT2PANTHERPTHR23137UNCHARACTERIZEDcoord: 89..237
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 115..140
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 205..224
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..114
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 146..165
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 141..145
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 200..204
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 225..247
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 166..176
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 177..199
NoneNo IPR availableTMHMMTMhelixcoord: 205..227
NoneNo IPR availableTMHMMTMhelixcoord: 115..137
NoneNo IPR availableTMHMMTMhelixcoord: 178..200
NoneNo IPR availableTMHMMTMhelixcoord: 147..166

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_3404contigScGOVlb_3404:3624934..3625784 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi12158.t1Gvermi12158.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_3404 3624934..3625784 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi12158.t1 ID=Gvermi12158.t1|Name=Gvermi12158.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=248bp
MLKLRPNRSTSQMGLLEGLNSLQGAPLPAPATSGAASASGDALASLSASA
KSLFGDLSGSLGPSLESLNDKAKQSVGSVRRLMGDEAAGDEEAPAQMTLS
DEINTMLNLSMVQRIGLFGMIFGTGVLLICMSFTFLPLIVVVPHKFAASF
TLGNVLAITSTWVLVGPRAQIRNMFNPVRAVASAVYLASLVFTLLAAFFG
GQLRYLLVMVALVAELASLIWYALSYIPYGRQMICRVVGVMGISFGS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007305Vesicle_transpt_Got1/SFT2
IPR011691Vesicle_transpt_SFT2