Gvermi12150.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi12150.t1
Unique NameGvermi12150.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length484
Homology
BLAST of Gvermi12150.t1 vs. uniprot
Match: A0A2V3IQ72_9FLOR (Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 2 protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IQ72_9FLOR)

HSP 1 Score: 463 bits (1192), Expect = 4.210e-157
Identity = 266/491 (54.18%), Postives = 317/491 (64.56%), Query Frame = 0
Query:    1 MASSDAPIVDVSAKNEQ-LSKKASSSSGDEAALVIKNPTDGPGTLPFSLSLPTGTTVGELKQELNANYPGSPPIQAQRLIYAGKLLRDGQKLREFLSPHQQAGTPHTIHLVVSYPQQTRPSSQNAATANQPSTHTGAAGGASGTQLPQLPQFAYNGQFLGGQ---VPIPLQEAMYAHHLQVFENVVARTLQNGNGAQLDPRTLAQMH-AADVAAAAAAA---NAMDGRTPTHGVPPPLAHVNGVFPGMMPMHPDVRFYNLPHMNMAAAQHAXXXXXXXTHQQPPLQRFHQNGQPQPHPAQQQRGFNGFHLDVQIGRHGLPNGMRNALNAQNQPHVRQFVFQIEINWALIAKLLFIVYLLGHEGNSSRVYSLIIAALGIYLWQTGHLEWFRRLISIALPSPGRLIENLFPQQTQQHDAQQEDDSRESPPARQNPYGYPALIFFFVYSFVYGIVCSLLPAWNPQPLPRIDQIVQNPDRPQEEPDVGANHEHVD 483
            M+SS+ P    S  + Q  S+KA S    EA LVIKNPTDGPGTLPF LSLP  TTV  LK EL   YPGSP ++ QRLIYAGKLL D QKLREFLSPHQQ GTPHTIHLV+S PQ  +  SQ + T N   T    A  +   Q P+LP FAYNGQ  GGQ   +P+ LQE  YA HLQ+ E+++A+TLQN  G   DPR LAQM  AAD+           + + R   +   PPL                    ++P +NMA  +           QQPP Q+ +     +   A Q R FNGF LDVQIGR GL NG RN +N  NQPHVRQFVFQ+EINWALIAKL F+VYLLGHEGNS R+YSLI+AA+ IYLWQTGHL W RR +++ALP+P  LIE+LFPQQ     + + +D+  + PAR NPYGYPA++  F+YSF  G VCSLLPAWNPQPLPRI+QIVQNP+   EE    ANHEHV+
Sbjct:    1 MSSSEQPEPQESVTSGQSTSQKAKS----EADLVIKNPTDGPGTLPFVLSLPVSTTVERLKNELCTKYPGSPSVETQRLIYAGKLLSDSQKLREFLSPHQQNGTPHTIHLVISAPQPPQSFSQASTTQNSSPTVNDNADSSPDAQPPRLPPFAYNGQLFGGQAPRIPLHLQEVEYAEHLQLVESLLAQTLQNAAGTPPDPRLLAQMQQAADMXXXXXXXXXXGSQNVRAQPYATAPPLXXXXXXXXXXXXXXXXXXXQHVPPVNMADPR-----TLQQNMQQPPTQQGNDANPQRARQAGQPRRFNGFQLDVQIGRAGLQNGARNGVNVPNQPHVRQFVFQLEINWALIAKLFFLVYLLGHEGNSRRMYSLIVAAIAIYLWQTGHLGWLRRFVNMALPNPRHLIEHLFPQQP----SSENEDAAGNTPARSNPYGYPAIMLSFIYSFXXGFVCSLLPAWNPQPLPRIEQIVQNPEHRHEEAARNANHEHVE 478          
BLAST of Gvermi12150.t1 vs. uniprot
Match: R7QAY9_CHOCR (Ubiquitin-like domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QAY9_CHOCR)

HSP 1 Score: 174 bits (442), Expect = 5.480e-45
Identity = 163/540 (30.19%), Postives = 217/540 (40.19%), Query Frame = 0
Query:   22 ASSSSGDEAA------LVIKNPTDGPGTLPFSLSLPTGTTVGELKQELNANYPGSPPIQAQRLIYAGKLLRDGQKLREFLSPHQQAGTPHTIHLVVSYPQQTRPSSQNAATANQPSTHTGAAGGASGTQLPQL-----------------PQFAYNGQF------------LGGQ-----------------------------------VP----------------IPLQEAMYAHHLQVFENVVARTLQNGNGAQLDPRTLAQMHAADVAAAAAAANAMDGRTPTHGVPPPLAHVNGVFPGMMPMHPDVRFYNLPHMNMAAAQHAXXXXXXXTHQQPPLQRFHQNGQPQPHPAQQQRGFNGFHLDVQIGRHGLPNGMRNALNAQNQ-------PHVRQFVFQIEINWALIAKLLFIVYLLGHEGNSSRVYSLIIAALGIYLWQTGHLEWFRRLISIALPSPGRLIENLFPQQTQQHD-----AQQEDDSRESPPARQNPYGYPALIFFFVYSFVYGIVCSLLPAWNPQPLPRIDQIV 463
            ASS  G E+A      +++KNPTD PG++PF+L +    TV  LK+ L ++YPGSP + +QRLIYAGKLL+D   L   L+   +    H IHLVVS   +       AAT+   ++ T    G+S                        P   YN  F            + GQ                                   VP                 P+ +A YA HLQ  E ++      G+G        AQ   A  AAAAAAA                    GV  G      D R              A        +          N  P P   + Q    G      IG  G   GM   LN Q           VR++VF  E+NW LI KL+F+VYLLG EG   RVY L+  AL IYLWQT  L +  R+  IALP+P +L E  FP+    ++     +Q + D     P   + +G  A++  F+YSF YG V SLLPAW P  LPR+++++
Sbjct:   11 ASSPEGTESAESPMFNILVKNPTDRPGSMPFTLDVNVKATVRNLKELLTSSYPGSPSVTSQRLIYAGKLLKDSHSLETILTSTDRPAQ-HIIHLVVSSRHRAA-----AATSRASTSRTSTLAGSSAVPYQSXXXXXXXXXXXXXXXXTAPPQNYNNMFHPYVAFQQYPPGVEGQRYPYPPVPGVPPPDPSMYPLPYPPPQXXXXXXXSDVPGNVQAHRNAPQGPLPFAPMDQASYAAHLQAMERII------GDG------LAAQYTGAQEAAAAAAAR-------------------GVREGA-----DARVXXXXXXXXXXXAQAHIQAWTDLNA-----GLRNNAAPAPPQNRPQGPDAGLGFQFGIGN-GAEEGMHQNLNPQENHGIEHDGARVRRYVFHFEVNWTLILKLIFVVYLLGQEGTPRRVYILLSLALVIYLWQTNRLGFLGRIAGIALPNPVQLFEAFFPRVQGPNEEGTQASQSDQDPNAQSPRGSSRFGRGAVVLCFIYSFFYGFVGSLLPAWRPPALPRVEELL 502          
BLAST of Gvermi12150.t1 vs. uniprot
Match: A0A5J4YI10_PORPP (Ubiquitin-like domain-containing protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YI10_PORPP)

HSP 1 Score: 93.6 bits (231), Expect = 1.120e-16
Identity = 138/490 (28.16%), Postives = 200/490 (40.82%), Query Frame = 0
Query:   55 TVGELKQELNANYPGSPPIQAQRLIYAGKLLRDGQKLREFLSPHQQAGTPH---TIHLVVSYPQQTRPSSQNAATANQPSTHTGA--------AGGASGTQLPQLPQFAYNGQFLGGQVP-IPLQE-AMYAHHLQVFENVVARTLQNGNGA--QLDPRTLAQMHA-----------------ADVAAAAAAANAMDGRTPTHGVPPPLAHVN--GVFPGMMPM-----HPDVRFYNLPHM--NMAAAQHAXXXXXXXTHQQPPLQR-------FHQNGQPQPHPAQQQRGFNGFHLDVQIGRHGLPNGMRNALNAQNQPHVRQFVFQIEINWALIAKLLFIVYLLGHEGNSSRVYSLIIAALGIYLWQTGHLEWFRRLISIALPSPGRLIENL----FPQQTQ-QHDAQQE--DDSRE----------SPPARQNPYGYPALIFFFVYSFVYGIVCSLLPAWNPQPLPRIDQIVQNPDRPQEE-PDVGAN 478
            TV +LK+ + A+  G P + +QRL+ AGKLL+D  KL + L P  QAG+      IHLVV      +  +  A   N P+  T          A GA     P               +P +P+Q+ A   +H Q+ +N  A    NG+G    +D     QM+                  A      AAA   D + P   VP   A  N  G    +  +     HP+     LP    + +A   A       T   PP QR           G  + H                  +      MR   +A+ Q H R  V + EINWALI KL F+V+L+G EG   +++ +   A+ IY+WQ G L   +R +    P+P RL   L     PQ+ Q QH  +Q+   ++RE          + P+  +  G P     +  SF YG++CSL+P+W P   PR  + ++ P  P     DV AN
Sbjct:   68 TVLDLKRFIQAHDMGRPELSSQRLVAAGKLLQDETKLID-LVPDNQAGSAEPQVVIHLVVPR----KHGAHGAPLGNGPADSTQRQQPRSEPPATGAGAPFTPLAXXXXXXXXXXXXFMPFVPVQDPASQWNHFQL-QNQRA----NGSGGVPPVDMTHWMQMYVQXXXXXXXXXXHLMILYAHARMQQAAAQNGDAQPPAGAVPRSDAPSNSSGTLRDLSSVSAPVAHPE----GLPRSVASQSAQDPALVRVGTSTGTAPPRQRPVDPMSSVENQGLQERHXXXXXXXXXXXXXXXXXXQQYEEQPMRQ--HARVQMHQRPMVLRFEINWALILKLAFVVFLIGQEGPPWKIFLMSFVAVMIYMWQIGRLAPLQRFVEQNFPNPARLFPVLPDGDLPQENQGQHGHEQQFPANAREDRGDALRAGQATPSAGSQVGPPNRPSLYFLSFFYGLICSLVPSWRP---PRAAEALRPPAHPAPAGEDVNAN 538          
BLAST of Gvermi12150.t1 vs. uniprot
Match: A0A1X6PKS0_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PKS0_PORUM)

HSP 1 Score: 72.8 bits (177), Expect = 6.370e-10
Identity = 46/138 (33.33%), Postives = 70/138 (50.72%), Query Frame = 0
Query:  330 FVFQIEINWALIAKLLFIVYLLGHEGNSSRVYSLIIAALGIYLWQTGHLEWFRRLISIALPSPGRLIENLFPQQTQQHDAQQEDDSRESPPARQNPYGYPALIFFFVYSFVYGIVCSLLPAWNPQPLPRIDQIVQNPD 467
            F  ++ ++WAL+ KL F+V+LLG + +  R+Y+L+   + +YL  +G L       + A PSPGRL   + P      DA    +          P G   ++    Y+ VYG+VCSL+PAW      R D+I   PD
Sbjct:  508 FALRLHVDWALVLKLGFVVFLLGQDASHRRLYALVAGGVALYLGLSGRLAGLLAWAARAAPSPGRLAAAIAPGGWVP-DAGTGGEGAPGAATAGRP-GTARMLGVCAYALVYGLVCSLVPAW------RADEIRGVPD 637          
BLAST of Gvermi12150.t1 vs. uniprot
Match: A0A1L9NPP7_ASPTC (Ubiquitin-like domain-containing protein n=1 Tax=Aspergillus tubingensis (strain CBS 134.48) TaxID=767770 RepID=A0A1L9NPP7_ASPTC)

HSP 1 Score: 59.3 bits (142), Expect = 1.170e-6
Identity = 34/92 (36.96%), Postives = 54/92 (58.70%), Query Frame = 0
Query:   46 FSLSLPTGTTVGELKQELNANYPGSPPIQAQRLIYAGKLLRDGQKLREFLSPHQQAGTPHTIHLVVSYPQQTRPSSQNAATANQPSTHTGAA 137
            ++L+LP+ T+V +LK++L+++     P + QRLIY+G++L+D + L  +     +    HTIHLV S P   RP    AA+    S   GAA
Sbjct:   25 YTLTLPSSTSVSDLKEKLSSSEYADTPAERQRLIYSGRVLKDNETLATY-----KIKDGHTIHLVKSAPSNVRPG--GAASTTSTSAPAGAA 109          
BLAST of Gvermi12150.t1 vs. uniprot
Match: A0A7R9TRM5_9VIRI (Hypothetical protein (Fragment) n=1 Tax=Prasinoderma coloniale TaxID=156133 RepID=A0A7R9TRM5_9VIRI)

HSP 1 Score: 57.0 bits (136), Expect = 4.790e-6
Identity = 36/96 (37.50%), Postives = 53/96 (55.21%), Query Frame = 0
Query:   27 GDEAALVIKNPTDGPGTLPFSLSLPTGTTVGELKQELNANYPGSPPIQAQRLIYAGKLLRDGQKLREFLSPHQQAGT-PHTIHLVVSYPQQTRPSS 121
            G+   L+ KNP+     + FSL    G  V  LK+ +   Y G+PP + Q+LIYAG++LRD   L + L     A + P T+HLVV     ++P+S
Sbjct:   36 GEAVQLIFKNPSKPD--VDFSLEARLGWDVFRLKEAVAERYEGNPPPREQKLIYAGRVLRDTAVLEDVLGRASAAESGPLTLHLVVKPGGASQPTS 129          
BLAST of Gvermi12150.t1 vs. uniprot
Match: A0A0F4YKB7_TALEM (Ubiquitin-like protein DskB n=1 Tax=Rasamsonia emersonii CBS 393.64 TaxID=1408163 RepID=A0A0F4YKB7_TALEM)

HSP 1 Score: 60.1 bits (144), Expect = 5.120e-6
Identity = 40/104 (38.46%), Postives = 59/104 (56.73%), Query Frame = 0
Query:   46 FSLSLPTGTTVGELKQELNANYPGSPPIQAQRLIYAGKLLRDGQKLREFLSPHQQAGTPHTIHLVVSYPQQTRPSSQNAATANQPSTHTGAAGGASGTQLPQLP 149
            F+L+LPT TTV ELK +L+++     P   QRLIY+G++L+D + L  +     +    +TIHLV S       S+Q  A A QPST T  +G  +   +P +P
Sbjct:   25 FTLTLPTSTTVAELKNKLSSSEYADTPADRQRLIYSGRVLKDNETLATY-----KIKEGNTIHLVKS-----AASNQRQAPAAQPSTAT--SGANANQSIPGVP 116          
BLAST of Gvermi12150.t1 vs. uniprot
Match: UPI000DBDB470 (ubiquitin-like protein DskB n=1 Tax=Aspergillus costaricaensis CBS 115574 TaxID=1448317 RepID=UPI000DBDB470)

HSP 1 Score: 59.3 bits (142), Expect = 8.880e-6
Identity = 34/92 (36.96%), Postives = 54/92 (58.70%), Query Frame = 0
Query:   46 FSLSLPTGTTVGELKQELNANYPGSPPIQAQRLIYAGKLLRDGQKLREFLSPHQQAGTPHTIHLVVSYPQQTRPSSQNAATANQPSTHTGAA 137
            ++L+LP+ T+V +LK++L+++     P + QRLIY+G++L+D + L  +     +    HTIHLV S P   RP    AA+    S   GAA
Sbjct:   25 YTLTLPSSTSVSDLKEKLSSSEYADTPAERQRLIYSGRVLKDNETLATY-----KIKDGHTIHLVKSAPSNVRPG--GAASTTSTSAPAGAA 109          
The following BLAST results are available for this feature:
BLAST of Gvermi12150.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
A0A2V3IQ72_9FLOR4.210e-15754.18Homocysteine-responsive endoplasmic reticulum-resi... [more]
R7QAY9_CHOCR5.480e-4530.19Ubiquitin-like domain-containing protein n=1 Tax=C... [more]
A0A5J4YI10_PORPP1.120e-1628.16Ubiquitin-like domain-containing protein n=1 Tax=P... [more]
A0A1X6PKS0_PORUM6.370e-1033.33Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A1L9NPP7_ASPTC1.170e-636.96Ubiquitin-like domain-containing protein n=1 Tax=A... [more]
A0A7R9TRM5_9VIRI4.790e-637.50Hypothetical protein (Fragment) n=1 Tax=Prasinoder... [more]
A0A0F4YKB7_TALEM5.120e-638.46Ubiquitin-like protein DskB n=1 Tax=Rasamsonia eme... [more]
UPI000DBDB4708.880e-636.96ubiquitin-like protein DskB n=1 Tax=Aspergillus co... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000626Ubiquitin-like domainPFAMPF00240ubiquitincoord: 46..111
e-value: 7.9E-8
score: 31.9
IPR000626Ubiquitin-like domainPROSITEPS50053UBIQUITIN_2coord: 30..94
score: 12.857583
NoneNo IPR availableGENE3D3.10.20.90coord: 23..119
e-value: 1.4E-18
score: 68.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 113..143
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 400..421
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 16..31
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 260..294
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 275..294
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..38
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 461..483
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 352..357
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 330..351
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 375..425
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 426..448
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..329
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 449..483
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 358..374
NoneNo IPR availableTMHMMTMhelixcoord: 426..448
NoneNo IPR availableTMHMMTMhelixcoord: 360..377
NoneNo IPR availableTMHMMTMhelixcoord: 331..353
IPR039751Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 1 /2PANTHERPTHR12943HOMOCYSTEINE-RESPONSIVE ENDOPLASMIC RETICULUM-RESIDENT UNIQUITIN-LIKE DOMAIN HERPUD PROTEIN FAMILY MEMBERcoord: 22..452
IPR029071Ubiquitin-like domain superfamilySUPERFAMILY54236Ubiquitin-likecoord: 24..117

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_3404contigScGOVlb_3404:3581452..3582903 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi12150.t1Gvermi12150.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_3404 3581452..3582903 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi12150.t1 ID=Gvermi12150.t1|Name=Gvermi12150.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=484bp
MASSDAPIVDVSAKNEQLSKKASSSSGDEAALVIKNPTDGPGTLPFSLSL
PTGTTVGELKQELNANYPGSPPIQAQRLIYAGKLLRDGQKLREFLSPHQQ
AGTPHTIHLVVSYPQQTRPSSQNAATANQPSTHTGAAGGASGTQLPQLPQ
FAYNGQFLGGQVPIPLQEAMYAHHLQVFENVVARTLQNGNGAQLDPRTLA
QMHAADVAAAAAAANAMDGRTPTHGVPPPLAHVNGVFPGMMPMHPDVRFY
NLPHMNMAAAQHAQHAHHAHTHQQPPLQRFHQNGQPQPHPAQQQRGFNGF
HLDVQIGRHGLPNGMRNALNAQNQPHVRQFVFQIEINWALIAKLLFIVYL
LGHEGNSSRVYSLIIAALGIYLWQTGHLEWFRRLISIALPSPGRLIENLF
PQQTQQHDAQQEDDSRESPPARQNPYGYPALIFFFVYSFVYGIVCSLLPA
WNPQPLPRIDQIVQNPDRPQEEPDVGANHEHVD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000626Ubiquitin-like_dom
IPR039751HERPUD1/2
IPR029071Ubiquitin-like_domsf