Gvermi12116.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi12116.t1
Unique NameGvermi12116.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length100
Homology
BLAST of Gvermi12116.t1 vs. uniprot
Match: A0A2V3J5G9_9FLOR (Cyclin-U4-1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J5G9_9FLOR)

HSP 1 Score: 119 bits (298), Expect = 6.700e-31
Identity = 61/106 (57.55%), Postives = 73/106 (68.87%), Query Frame = 0
Query:    1 MVDDVLYDNAHFAKVGGLDIKELNALELHMLHALRFDLCVSAEQFESFERSVLADVLASDDAAFCTLRERLRNMGYAAR------------EALPPCSPVSSLDEL 94
            M+DDVLYDNAHFAKVGGLD+ ELN L   MLH L+F+L VS +QFE FE+ VL  VL   D+++  L ERLRNMGYA               +LPPCSPVSS+D+L
Sbjct:  182 MMDDVLYDNAHFAKVGGLDVAELNMLXXXMLHMLQFELVVSTDQFERFEKRVLTHVLHCHDSSYFVLHERLRNMGYAVSAEPQQKVHQQRVHSLPPCSPVSSIDDL 287          
BLAST of Gvermi12116.t1 vs. uniprot
Match: A0A7S1EV37_9RHOD (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S1EV37_9RHOD)

HSP 1 Score: 69.7 bits (169), Expect = 4.230e-12
Identity = 31/59 (52.54%), Postives = 44/59 (74.58%), Query Frame = 0
Query:    3 DDVLYDNAHFAKVGGLDIKELNALELHMLHALRFDLCVSAEQFESFERSVLADVLASDD 61
            +DVLYDN HF+KVGG+ ++ELN +EL ML  L ++L VS + +  FERS+L +V+ S D
Sbjct:  118 EDVLYDNLHFSKVGGIYLRELNLMELKMLEELNYELFVSPDSYREFERSILDEVVKSSD 176          
BLAST of Gvermi12116.t1 vs. uniprot
Match: A0A7J7IFG4_9RHOD (Mitochondrial peripheral inner membrane protein n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IFG4_9RHOD)

HSP 1 Score: 68.6 bits (166), Expect = 2.000e-11
Identity = 40/93 (43.01%), Postives = 61/93 (65.59%), Query Frame = 0
Query:    3 DDVLYDNAHFAKVGGLDIKELNALELHMLHALRFDLCVSAEQFESFERSVLADVL-ASDDAAFCTLRERLRNMGYAAREAL--PPC--SPVSS 90
            DD+ Y+NA++AKVGGL ++E+NALE+ ML  L + L VS E+F +FER +L   + A+ D     L +RL + G+  + +L  P C  SP+S+
Sbjct:  260 DDIFYNNAYYAKVGGLPLREMNALEVRMLRELAYQLNVSLEEFHAFERVLLCKAIRAAPD-----LGKRLEDSGFPLQRSLWRPICNASPLSA 347          
BLAST of Gvermi12116.t1 vs. uniprot
Match: A0A5J4Z087_PORPP (Cyclin-U4-1 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z087_PORPP)

HSP 1 Score: 63.5 bits (153), Expect = 6.890e-10
Identity = 30/57 (52.63%), Postives = 41/57 (71.93%), Query Frame = 0
Query:    3 DDVLYDNAHFAKVGGLDIKELNALELHMLHALRFDLCVSAEQFESFERSVLADVLAS 59
            +DV YDNAHFAKVGG+ ++ELN +EL  L AL F + VS +QF +  RS++ +V  S
Sbjct:  133 EDVFYDNAHFAKVGGITVQELNRMELEFLKALEFRMHVSEDQFAACARSMIEEVSRS 189          
BLAST of Gvermi12116.t1 vs. uniprot
Match: A0A7S0T842_9RHOD (Hypothetical protein n=1 Tax=Erythrolobus madagascarensis TaxID=708628 RepID=A0A7S0T842_9RHOD)

HSP 1 Score: 62.8 bits (151), Expect = 1.590e-9
Identity = 33/69 (47.83%), Postives = 46/69 (66.67%), Query Frame = 0
Query:    3 DDVLYDNAHFAKVGGLDIKELNALELHMLHALRFDLCVSAEQFESFERSVLADVLASDDAAFCTLRERL 71
            DDV Y+NA++AKVGG+ ++E+N LE   L A+ F+L VS E+F  FE  V+ +VL SD  + C    RL
Sbjct:  150 DDVYYNNAYYAKVGGIPLQEINLLETEFLMAVGFELFVSEEEFIRFETDVVDEVL-SDRTSLCADARRL 217          
BLAST of Gvermi12116.t1 vs. uniprot
Match: A0A5J4YW36_PORPP (Cyclin-P3-1 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YW36_PORPP)

HSP 1 Score: 60.5 bits (145), Expect = 8.230e-9
Identity = 32/75 (42.67%), Postives = 45/75 (60.00%), Query Frame = 0
Query:    3 DDVLYDNAHFAKVGGLDIKELNALELHMLHALRFDLCVSAEQFESFERSVLADVL-ASDDAAFCTLRERLRNMGY 76
            DD+ Y N+ +AKVGG+ + ELNALE  ML  L F L V  +++E+FE S+LA +  A        L+  L + GY
Sbjct:  139 DDIYYQNSFYAKVGGISVGELNALEREMLSLLNFRLYVDLDEYEAFEASLLAGIADAPTMGPILELQNLLLHFGY 213          
BLAST of Gvermi12116.t1 vs. uniprot
Match: A0A8J5TAP2_ZIZPA (Uncharacterized protein n=1 Tax=Zizania palustris TaxID=103762 RepID=A0A8J5TAP2_ZIZPA)

HSP 1 Score: 60.1 bits (144), Expect = 1.060e-8
Identity = 27/60 (45.00%), Postives = 44/60 (73.33%), Query Frame = 0
Query:    2 VDDVLYDNAHFAKVGGLDIKELNALELHMLHALRFDLCVSAEQFESFERSVLADVLASDD 61
            +DD+ Y+NA+FA+VGG+++ E+N LEL +L ALRF L V+   F ++   V  +V+A++D
Sbjct:  131 MDDIHYNNAYFARVGGVEVAEMNGLELELLFALRFHLNVTPATFATYCAKVEGEVMAAED 190          
BLAST of Gvermi12116.t1 vs. uniprot
Match: UPI001E1D6F52 (cyclin-U4-1-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D6F52)

HSP 1 Score: 59.3 bits (142), Expect = 1.620e-8
Identity = 28/59 (47.46%), Postives = 40/59 (67.80%), Query Frame = 0
Query:    2 VDDVLYDNAHFAKVGGLDIKELNALELHMLHALRFDLCVSAEQFESFERSVLADVLASD 60
            +DD +Y NA++A+VGGL   E+N LE  ML  LR+++ VSAE +  FE S+ + V  SD
Sbjct:  127 LDDEIYSNAYYARVGGLSTSEMNRLEASMLELLRWNVSVSAELYNLFEESLASGVCTSD 185          
BLAST of Gvermi12116.t1 vs. uniprot
Match: M1V7G0_CYAM1 (Similar to PREG1-like negative regulator n=1 Tax=Cyanidioschyzon merolae (strain 10D) TaxID=280699 RepID=M1V7G0_CYAM1)

HSP 1 Score: 60.1 bits (144), Expect = 1.960e-8
Identity = 32/86 (37.21%), Postives = 48/86 (55.81%), Query Frame = 0
Query:    3 DDVLYDNAHFAKVGGLDIKELNALELHMLHALRFDLCVSAEQFESFERSVLADVLASDDAAFCTLRERLRNMGYAAREALPPCSPV 88
            DD+ Y+NA++AKVGGL + E+NALE+ ML  L + L VS E+F +FE  ++   + S       L E    + +     L P  P+
Sbjct:  259 DDIFYNNAYYAKVGGLPLSEMNALEVRMLRELSYQLNVSVEEFYNFESMLINRAVRSAPELGRQLSESGFPLHHTLWHPLSPSLPI 344          
BLAST of Gvermi12116.t1 vs. uniprot
Match: A0A7S1A9J5_NOCSC (Hypothetical protein n=1 Tax=Noctiluca scintillans TaxID=2966 RepID=A0A7S1A9J5_NOCSC)

HSP 1 Score: 59.3 bits (142), Expect = 2.160e-8
Identity = 29/53 (54.72%), Postives = 40/53 (75.47%), Query Frame = 0
Query:    2 VDDVLYDNAHFAKVGGLDIKELNALELHMLHALRFDLCVSAEQFESFERSVLA 54
            ++D +Y NAH+AK GG+ +KELN LE  +L AL FDL VS EQF+++E  +LA
Sbjct:  118 LEDRVYSNAHYAKAGGVHVKELNRLERVLLVALDFDLRVSPEQFKAYEVCLLA 170          
The following BLAST results are available for this feature:
BLAST of Gvermi12116.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J5G9_9FLOR6.700e-3157.55Cyclin-U4-1 n=1 Tax=Gracilariopsis chorda TaxID=44... [more]
A0A7S1EV37_9RHOD4.230e-1252.54Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]
A0A7J7IFG4_9RHOD2.000e-1143.01Mitochondrial peripheral inner membrane protein n=... [more]
A0A5J4Z087_PORPP6.890e-1052.63Cyclin-U4-1 n=1 Tax=Porphyridium purpureum TaxID=3... [more]
A0A7S0T842_9RHOD1.590e-947.83Hypothetical protein n=1 Tax=Erythrolobus madagasc... [more]
A0A5J4YW36_PORPP8.230e-942.67Cyclin-P3-1 n=1 Tax=Porphyridium purpureum TaxID=3... [more]
A0A8J5TAP2_ZIZPA1.060e-845.00Uncharacterized protein n=1 Tax=Zizania palustris ... [more]
UPI001E1D6F521.620e-847.46cyclin-U4-1-like n=1 Tax=Mercenaria mercenaria Tax... [more]
M1V7G0_CYAM11.960e-837.21Similar to PREG1-like negative regulator n=1 Tax=C... [more]
A0A7S1A9J5_NOCSC2.160e-854.72Hypothetical protein n=1 Tax=Noctiluca scintillans... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.472.10coord: 1..75
e-value: 1.0E-13
score: 53.2
IPR013922Cyclin PHO80-likePFAMPF08613Cyclincoord: 1..38
e-value: 5.2E-8
score: 33.4
IPR013922Cyclin PHO80-likePANTHERPTHR15615UNCHARACTERIZEDcoord: 1..53

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_3404contigScGOVlb_3404:3452777..3453076 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi12116.t1Gvermi12116.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_3404 3452777..3453076 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi12116.t1 ID=Gvermi12116.t1|Name=Gvermi12116.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=100bp
MVDDVLYDNAHFAKVGGLDIKELNALELHMLHALRFDLCVSAEQFESFER
SVLADVLASDDAAFCTLRERLRNMGYAAREALPPCSPVSSLDELPASHA*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013922Cyclin_PHO80-like