Gvermi12113.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi12113.t1
Unique NameGvermi12113.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length445
Homology
BLAST of Gvermi12113.t1 vs. uniprot
Match: A0A2V3J5G3_9FLOR (Spindle assembly abnormal protein 6-like n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J5G3_9FLOR)

HSP 1 Score: 264 bits (675), Expect = 1.820e-80
Identity = 201/450 (44.67%), Postives = 255/450 (56.67%), Query Frame = 0
Query:    1 MAADSLLEELLPLVVYRRAPPG-PPPTTSSLSVSVAWSEPDSALTLTLFDLSADLLLLRHVQTASTYPAFRAAQSLRVDFSQFAAHLVGLFKRVVTDDAYIAELYLGAAGEAVRDAARDPGGDAGAAERHDDEQQFHTPPER---LPEHAAAPTPV---LRIVEIATFKLITHIELDMQHASSHLLVSTLATLARGATTGAQRQRQLESDLEHVRSQLRDANLNADRLQHLLTEAEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSQRQQATDEIEKGNKIIDTLQNELRTSRARSRVKSKLIAKQEQILSEREARVAELQREVVRMRDRAALLQVQKEGVDDRLRDALGKLEENRAVLQSDQQVIAYLNRELNERLIGQIGADTVQDVLGATQDVVDGAGVA 443
            MA D LL+  L + ++  A    PPP+ + L+++++ S  DS LT T+FDLS+ LLLL H QT S+YPAFRAAQSLR+ FS F AHLV L  R  ++ +Y+A L+L                    A  H    +FHTPPE     P H  A TPV    R+VE+A FK ITHI++ MQHAS   L++TLA LAR     A R+R L   L+   + L++ N    +L+  L+ A++                                         XXX                XXXXXXXXXXXXXX             GN+IID L NE+RT R++SR+KS LI KQE ++ +R+A ++ELQRE+VR+RDRAALL VQKEGVD RL  AL KLEENRAVLQSDQQVIAYLNRELNER++G IGA+  +D   A    VDGA VA
Sbjct:    1 MAPDVLLDTTLSVAIHSAAASSQPPPSATPLNLTLSQSATDSTLTFTVFDLSSQLLLLHHTQTPSSYPAFRAAQSLRIQFSAFPAHLVDLLSRPHSNPSYVASLHLH------------------VAPNHPS-LEFHTPPETPQPTPAHHDASTPVHASFRVVEMAPFKAITHIDIPMQHASHAQLIATLADLARAGAASAARERSLNQSLQSNHTDLQNVNARVKKLEADLSNAQRDLQHALHESSNCEQLRHQVAKREDQLAQLPAQQQQIQELTTXXXHLQSQLPVLEQTVQTHXXXXXXXXXXXXXXXXXXXXXXXXXXXGNQIIDRLHNEVRTLRSKSRIKSALIQKQELVIKQRDASLSELQREIVRVRDRAALLHVQKEGVDSRLNAALTKLEENRAVLQSDQQVIAYLNRELNERVMGDIGAEAARDSGAA----VDGADVA 427          
BLAST of Gvermi12113.t1 vs. uniprot
Match: A0A7S0GNB1_MICPS (Hypothetical protein n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0GNB1_MICPS)

HSP 1 Score: 70.5 bits (171), Expect = 7.990e-10
Identity = 42/115 (36.52%), Postives = 74/115 (64.35%), Query Frame = 0
Query:  311 ATDEIEKGNKIIDTLQNELRTSRARSRVKSKLIAKQEQILSEREARVAELQREVVRMRDRAALLQVQKEGVDDRLRDALGKLEENRAVLQSDQQVIAYLNRELNERLIGQIGADT 425
            +  EI KGN+II+ LQ ELR+++A++++K+ +IA+QE +LSER+  +    RE           + +   +  R+ D   KLEE++A+L S+QQ+I +LN ++NE  +G++G  +
Sbjct:  153 SAGEIRKGNQIIERLQAELRSAKAKAKLKAAVIAQQETLLSERQGALDAAIRERAEATRETDSCRAEIRALTARVEDQRRKLEESQALLASNQQMITWLNGQVNEAQLGRLGTSS 267          
BLAST of Gvermi12113.t1 vs. uniprot
Match: A0A2P4X489_9STRA (Spindle assembly protein n=2 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4X489_9STRA)

HSP 1 Score: 69.3 bits (168), Expect = 5.620e-9
Identity = 41/109 (37.61%), Postives = 71/109 (65.14%), Query Frame = 0
Query:  311 ATDEIEKGNKIIDTLQNELRTSRARSRVKSKLIAKQEQILSEREARVAELQREVVRMRDRAALLQVQKEGVDDRLRDALGKLEENRAVLQSDQQVIAYLNRELNERLIG 419
            +  EI KGN+II+ +QNE RT +++ R+K+K+I +QEQ + E++     LQRE   +  ++    ++K    D +++   KLE++  +L S+QQVI +LN+E+NE  +G
Sbjct:  411 SISEINKGNEIIERIQNENRTLKSKMRMKAKIIKQQEQFVEEKQ-----LQREEALLELKSTKDDIRKRDEHDTIKELSQKLEDSNKLLASNQQVITWLNKEINEAQLG 514          
BLAST of Gvermi12113.t1 vs. uniprot
Match: A0A5B8MTP7_9CHLO (Putative centrosomal protein n=1 Tax=Chloropicon primus TaxID=1764295 RepID=A0A5B8MTP7_9CHLO)

HSP 1 Score: 69.3 bits (168), Expect = 5.760e-9
Identity = 38/112 (33.93%), Postives = 73/112 (65.18%), Query Frame = 0
Query:  311 ATDEIEKGNKIIDTLQNELRTSRARSRVKSKLIAKQEQILSEREARVAELQREVVRMRDRAALLQVQKEGVDDRLRDALGKLEENRAVLQSDQQVIAYLNRELNERLIGQIG 422
            +  E+ KGN+II+ LQ +L++SRA+ ++KS++I +QE +L E+++ V +L+R+ +  + +   +Q +K  +     D   KL E++ +L  +QQ+I +LN ++NE  I + G
Sbjct:  438 SAQEVNKGNQIIEKLQQDLKSSRAKMKLKSQVITQQEHLLQEKQSAVDKLERDEMISKSQIQGMQAEKSALSRTCDDQKDKLLESKQLLDQNQQMIQWLNNQINEAQIAKYG 549          
BLAST of Gvermi12113.t1 vs. uniprot
Match: A0A7S0SVA1_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Mantoniella antarctica TaxID=81844 RepID=A0A7S0SVA1_9CHLO)

HSP 1 Score: 67.4 bits (163), Expect = 6.070e-9
Identity = 40/109 (36.70%), Postives = 71/109 (65.14%), Query Frame = 0
Query:  311 ATDEIEKGNKIIDTLQNELRTSRARSRVKSKLIAKQEQILSEREARVAELQREVVRMRDRAALLQVQKEGVDDRLRDALGKLEENRAVLQSDQQVIAYLNRELNERLIG 419
            +  EI KGN+II+ LQ ELR+++A++++K+ +IA+QE +LSER +   +  RE   +   A   + +   +  R+ D   KLEE++ +L S+QQ+I +LN ++N+  +G
Sbjct:  158 SAGEIRKGNQIIERLQAELRSAKAKAKLKAAVIAQQEALLSERTSAAEKTSREHAELGREADAARSEVRALTSRVEDQRTKLEESQGLLVSNQQMIQWLNGQVNDAQLG 266          
BLAST of Gvermi12113.t1 vs. uniprot
Match: A0A225VE06_9STRA (Spindle assembly protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225VE06_9STRA)

HSP 1 Score: 64.7 bits (156), Expect = 1.670e-7
Identity = 44/115 (38.26%), Postives = 73/115 (63.48%), Query Frame = 0
Query:  311 ATDEIEKGNKIIDTLQNELRTSRARSRVKSKLIAKQEQILSE----REARVAELQ--REVVRMRDRAALLQVQKEGVDDRLRDALGKLEENRAVLQSDQQVIAYLNRELNERLIG 419
            +  EI KGN+II+ +QNE RT +++ R+K+K+I +QEQ + E    RE  + EL+  ++ +R RD   L       + D +++   KLE++  +L S+QQVI +LN+E+NE  +G
Sbjct:  416 SISEINKGNEIIERIQNENRTLKSKMRMKAKIIKQQEQFVEEKQLQREEALLELKSTKDDIRKRDEHILQ------LKDTIKELSQKLEDSNKLLVSNQQVITWLNKEINEAQLG 524          
BLAST of Gvermi12113.t1 vs. uniprot
Match: A0A0L0HKW7_SPIPD (SAS-6_N domain-containing protein n=2 Tax=Spizellomyces TaxID=4815 RepID=A0A0L0HKW7_SPIPD)

HSP 1 Score: 64.3 bits (155), Expect = 2.500e-7
Identity = 34/107 (31.78%), Postives = 71/107 (66.36%), Query Frame = 0
Query:  309 QQATDEIEKGNKIIDTLQNELRTSRARSRVKSKLIAKQEQILSEREARVAELQREVVRMRDRAALLQVQKEGVDDRLRDALGKLEENRAVLQSDQQVIAYLNRELNE 415
            +QAT+EI KGN+II  LQ +L++S+A+ ++K+ +  +QE++L ER A V   Q+E+   +D  + ++ +      R+ +   +++E +A+++ +  VI +L++++NE
Sbjct:  403 KQATEEINKGNEIIRRLQTDLKSSKAKLKLKNVVTMQQEKLLDERAATVQGQQKELTDAKDTLSKVREELHAAQGRIEELTKQVQEGKAIIEDNNHVIEWLHKQMNE 509          
BLAST of Gvermi12113.t1 vs. uniprot
Match: A0A5D6YHF9_9STRA (SAS-6_N domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YHF9_9STRA)

HSP 1 Score: 63.9 bits (154), Expect = 3.110e-7
Identity = 41/108 (37.96%), Postives = 65/108 (60.19%), Query Frame = 0
Query:  311 ATDEIEKGNKIIDTLQNELRTSRARSRVKSKLIAKQEQILSEREARVAELQREVVRMRDRAALLQVQKEGVDDRLRDALGKLEENRAVLQSDQQVIAYLNRELNERLI 418
            +  EI KGN II+ +Q+E     A+ R K+++I +QE IL ER+A+  EL RE+   RD       +   + D + +   KL+++  +L S+QQVI +LN+E+NE  I
Sbjct:  439 SISEINKGNDIIERIQSEAHALHAKMRTKARIIKQQELILDERQAQRDELVRELKSARDDIRKRDDELVALKDTVNELKQKLDDSNKLLASNQQVITWLNKEINEAQI 546          
BLAST of Gvermi12113.t1 vs. uniprot
Match: A0A3R7FX97_9STRA (SAS-6_N domain-containing protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7FX97_9STRA)

HSP 1 Score: 63.5 bits (153), Expect = 3.890e-7
Identity = 43/115 (37.39%), Postives = 72/115 (62.61%), Query Frame = 0
Query:  311 ATDEIEKGNKIIDTLQNELRTSRARSRVKSKLIAKQEQILS----EREARVAELQ--REVVRMRDRAALLQVQKEGVDDRLRDALGKLEENRAVLQSDQQVIAYLNRELNERLIG 419
            +  EI KGN+II+ +QNE RT +++ R K+K++ +QEQI+     +RE  + EL+  +E +R RD           + D +++   KLE++  +L S+QQVI +LN+E+NE  +G
Sbjct:  419 SISEINKGNEIIERIQNENRTLKSKMRTKAKIMKQQEQIVXXXKLQREEALLELKSTKEDIRKRDEHVAT------LKDTIKELSQKLEDSNKLLASNQQVITWLNKEINEAQLG 527          
BLAST of Gvermi12113.t1 vs. uniprot
Match: UPI001F041519 (spindle assembly abnormal protein 6 homolog n=1 Tax=Xenia sp. Carnegie-2017 TaxID=2897299 RepID=UPI001F041519)

HSP 1 Score: 63.5 bits (153), Expect = 4.270e-7
Identity = 36/121 (29.75%), Postives = 76/121 (62.81%), Query Frame = 0
Query:  309 QQATDEIEKGNKIIDTLQNELRTSRARSRVKSKLIAKQEQILSEREARVAELQREVVRMRDRAALLQVQKEGVDDRLRDALGKLEENRAVLQSDQQVIAYLNRELNERLIGQIGADTVQDV 429
            Q  +DE+ KGN+II  +Q ELR S+A++++ + +IA+QE++++E+ + + +   E+  +         + + + + L  A  KLEEN+ +L++++ VI +LN+++NE+   + G  +V  +
Sbjct:  375 QSISDELVKGNEIILRIQKELRNSKAKNKLNATVIAQQEKVVTEKTSTMEKQNEELQTLMGEVKKKDAEIDTLKESLSTANDKLEENKQMLKTNENVINWLNKQINEQYQSKFGPASVNSL 495          
The following BLAST results are available for this feature:
BLAST of Gvermi12113.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J5G3_9FLOR1.820e-8044.67Spindle assembly abnormal protein 6-like n=1 Tax=G... [more]
A0A7S0GNB1_MICPS7.990e-1036.52Hypothetical protein n=1 Tax=Micromonas pusilla Ta... [more]
A0A2P4X489_9STRA5.620e-937.61Spindle assembly protein n=2 Tax=Phytophthora palm... [more]
A0A5B8MTP7_9CHLO5.760e-933.93Putative centrosomal protein n=1 Tax=Chloropicon p... [more]
A0A7S0SVA1_9CHLO6.070e-936.70Hypothetical protein (Fragment) n=1 Tax=Mantoniell... [more]
A0A225VE06_9STRA1.670e-738.26Spindle assembly protein n=1 Tax=Phytophthora mega... [more]
A0A0L0HKW7_SPIPD2.500e-731.78SAS-6_N domain-containing protein n=2 Tax=Spizello... [more]
A0A5D6YHF9_9STRA3.110e-737.96SAS-6_N domain-containing protein n=1 Tax=Pythium ... [more]
A0A3R7FX97_9STRA3.890e-737.39SAS-6_N domain-containing protein n=3 Tax=Phytopht... [more]
UPI001F0415194.270e-729.75spindle assembly abnormal protein 6 homolog n=1 Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 242..262
NoneNo IPR availableCOILSCoilCoilcoord: 197..238
NoneNo IPR availableCOILSCoilCoilcoord: 343..377
NoneNo IPR availableCOILSCoilCoilcoord: 280..328
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 115..147
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 115..139
NoneNo IPR availablePANTHERPTHR44281:SF2SPINDLE ASSEMBLY ABNORMAL PROTEIN 6 HOMOLOGcoord: 196..425
NoneNo IPR availablePANTHERPTHR44281SPINDLE ASSEMBLY ABNORMAL PROTEIN 6 HOMOLOGcoord: 66..232
NoneNo IPR availablePANTHERPTHR44281:SF2SPINDLE ASSEMBLY ABNORMAL PROTEIN 6 HOMOLOGcoord: 66..232
NoneNo IPR availablePANTHERPTHR44281SPINDLE ASSEMBLY ABNORMAL PROTEIN 6 HOMOLOGcoord: 196..425
IPR032396Spindle assembly abnormal protein 6, N-terminalPFAMPF16531SAS-6_Ncoord: 54..171
e-value: 3.4E-7
score: 30.6
IPR038558SAS-6, N-terminal domain superfamilyGENE3D2.170.210.20coord: 24..225
e-value: 4.1E-14
score: 54.4

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_3404contigScGOVlb_3404:3446771..3448105 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi12113.t1Gvermi12113.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_3404 3446771..3448105 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi12113.t1 ID=Gvermi12113.t1|Name=Gvermi12113.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=445bp
MAADSLLEELLPLVVYRRAPPGPPPTTSSLSVSVAWSEPDSALTLTLFDL
SADLLLLRHVQTASTYPAFRAAQSLRVDFSQFAAHLVGLFKRVVTDDAYI
AELYLGAAGEAVRDAARDPGGDAGAAERHDDEQQFHTPPERLPEHAAAPT
PVLRIVEIATFKLITHIELDMQHASSHLLVSTLATLARGATTGAQRQRQL
ESDLEHVRSQLRDANLNADRLQHLLTEAEQKMRMGERDSHKCRELEQVVQ
TNDQRVKELELSTERYQTVAAECDHLKTQVEALVESNANKDAEISALKQR
EQTLLSQRQQATDEIEKGNKIIDTLQNELRTSRARSRVKSKLIAKQEQIL
SEREARVAELQREVVRMRDRAALLQVQKEGVDDRLRDALGKLEENRAVLQ
SDQQVIAYLNRELNERLIGQIGADTVQDVLGATQDVVDGAGVAT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032396SAS-6_N
IPR038558SAS-6_N_sf