Gvermi11536.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi11536.t1
Unique NameGvermi11536.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length316
Homology
BLAST of Gvermi11536.t1 vs. uniprot
Match: A0A2V3IJV4_9FLOR (BZIP domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IJV4_9FLOR)

HSP 1 Score: 302 bits (774), Expect = 3.690e-99
Identity = 178/328 (54.27%), Postives = 209/328 (63.72%), Query Frame = 0
Query:    1 MDYLDFGLGAAGVDAAAQTPPPPQPAPSMHNLLNSSQALPQPQQPVPWGSAADIPF---------PSAPPLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGAMQKRPQAQAQEHASA--LRPASLVLEEDPPIDPHVVGQMGGLAFADHCKERARERFKEMKKNEHMANGDFDRMKRRKKGDTSMTPRQKYLRRLRMNQDSAAAARHAQEVYVHVLEKLVRTSEDDRKAMAREVQSLRQENMSLHGRLSELETVVAAAPPPPEPSLL--DVSRRPYDPIQVAKLVDMLTAPQTVSAEAADPDFARDCIQPAHAV 315
            MD LDF L A  +D     P  PQP  +M +LLN++    Q   P+ W +AAD+P           SAPP+                                             +  +P +  Q H SA  LRP  L  ++DPPIDPHVV QMGGLAFADHCKERARERFKE+KK EH+ANG+FDRMKRRKKGDTSMTPRQKYLRRLRMNQDSAAAARHAQEVYVHVLEKLV+T+ED++K M  E+Q L Q+N  LH RLS +ET+V   P P +P+       ++ YDPIQV KL+DMLTAPQTVSAEAADP+FA DCIQPAHAV
Sbjct:    1 MDLLDFNLTANPIDDVQPAPQQPQPN-AMRSLLNTNHPPSQQPGPMAWPTAADLPVVQPSHAASSSSAPPVAAAATPF------------------------------------SVLPPQPLSSPQSHPSAXXLRPPGLTPDDDPPIDPHVVDQMGGLAFADHCKERARERFKELKKTEHIANGEFDRMKRRKKGDTSMTPRQKYLRRLRMNQDSAAAARHAQEVYVHVLEKLVKTTEDEKKKMRSELQQLHQQNAMLHSRLSHMETMVERQPLPSDPASFYEHARKQAYDPIQVTKLIDMLTAPQTVSAEAADPNFANDCIQPAHAV 291          
BLAST of Gvermi11536.t1 vs. uniprot
Match: A0A1X6PBP3_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PBP3_PORUM)

HSP 1 Score: 65.1 bits (157), Expect = 5.180e-8
Identity = 44/113 (38.94%), Postives = 60/113 (53.10%), Query Frame = 0
Query:  146 GLAFADHCKERARERFKEMKKNEHMANGDFDRMKRRKKGDTSMTPRQKYLRRLRMNQDSAAAARHAQEVYVHVLEKLVRTSEDDRKAMAREVQSLRQENMSLHGRLSELETVV 258
            GL  A   KE AR  +K     +    G  DR KRR+KGD S++   K+ RRL  NQDSAAAARHA +VYV  LE  V  ++ +   +   +     +N  L G + +L  +V
Sbjct:  414 GLRRALAAKEHARSSYKAALAADMERRGQGDRFKRRRKGDASISAAAKHERRLLKNQDSAAAARHAHDVYVRTLEAGVAAADAEADRLRAAIGRAAADNAGLVGVIGQLRQLV 526          
BLAST of Gvermi11536.t1 vs. uniprot
Match: A0A1X6PKN1_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PKN1_PORUM)

HSP 1 Score: 61.6 bits (148), Expect = 7.180e-7
Identity = 37/65 (56.92%), Postives = 44/65 (67.69%), Query Frame = 0
Query:  176 DRMKRRKKGDTSMTPRQKYLRRLRMNQDSAAAARHAQEVYVHVLEKLVRTSEDDRKAMAREVQSL 240
            +R KRR+KGDTS+T  +K+ RRLR NQDSA AAR+AQEVYV  LE  V   + D  A   EV  L
Sbjct:  410 ERFKRRRKGDTSLTEAEKHGRRLRKNQDSATAARYAQEVYVRSLEATVERGDADLAAARAEVGRL 474          
BLAST of Gvermi11536.t1 vs. uniprot
Match: R7QV50_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QV50_CHOCR)

HSP 1 Score: 56.2 bits (134), Expect = 9.650e-7
Identity = 24/33 (72.73%), Postives = 28/33 (84.85%), Query Frame = 0
Query:  144 MGGLAFADHCKERARERFKEMKKNEHMANGDFD 176
            MGG+ +AD CKE+ RE FKEMKKNEHMA G+FD
Sbjct:    1 MGGIPYADLCKEKVREAFKEMKKNEHMAKGEFD 33          
The following BLAST results are available for this feature:
BLAST of Gvermi11536.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A2V3IJV4_9FLOR3.690e-9954.27BZIP domain-containing protein n=1 Tax=Gracilariop... [more]
A0A1X6PBP3_PORUM5.180e-838.94Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A1X6PKN1_PORUM7.180e-756.92Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
R7QV50_CHOCR9.650e-772.73Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 69..89
NoneNo IPR availableCOILSCoilCoilcoord: 223..257
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 98..116
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..141
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 54..68
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 69..87
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 29..44
IPR004827Basic-leucine zipper domainSMARTSM00338brlzneucoord: 189..253
e-value: 0.0062
score: 22.5

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_3404contigScGOVlb_3404:760506..761453 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi11536.t1Gvermi11536.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_3404 760506..761453 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi11536.t1 ID=Gvermi11536.t1|Name=Gvermi11536.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=316bp
MDYLDFGLGAAGVDAAAQTPPPPQPAPSMHNLLNSSQALPQPQQPVPWGS
AADIPFPSAPPLPPPPQQQQQQQQQQQQQQQQLQQLRQQPPSPPPGGASS
SSQQAGAMQKRPQAQAQEHASALRPASLVLEEDPPIDPHVVGQMGGLAFA
DHCKERARERFKEMKKNEHMANGDFDRMKRRKKGDTSMTPRQKYLRRLRM
NQDSAAAARHAQEVYVHVLEKLVRTSEDDRKAMAREVQSLRQENMSLHGR
LSELETVVAAAPPPPEPSLLDVSRRPYDPIQVAKLVDMLTAPQTVSAEAA
DPDFARDCIQPAHAV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004827bZIP