Gvermi11527.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi11527.t1
Unique NameGvermi11527.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length299
Homology
BLAST of Gvermi11527.t1 vs. uniprot
Match: A0A2V3IJT3_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IJT3_9FLOR)

HSP 1 Score: 367 bits (942), Expect = 7.420e-125
Identity = 202/280 (72.14%), Postives = 234/280 (83.57%), Query Frame = 0
Query:    1 MSVDVLRDTLADREAKLDVIRKKLKQAKERAARPKPKPTISTIQQRYLSAIAELEHKDKDLPRAHARPAANAVSSLASRWNQGIDERKVQKTAVHVRGNVTAAKKSFAHSDVPSAAKPDARPSARADQGPAEIVVEDGSDIPSWAKNQRKLVIKKENARSSVRVDVKELQGSVLMNAARDGSEAERTNKVEHAGNVKAALAMWGKTAEEDAKALAKKKELQERERAIQDQMRKQREAEERANAYKAAVQAFASMKLTDMTEEPSKEVELIAFLERKIALI 280
            MSV+ LRD L++REAKLD +R KLK AKERAARPKPK TIS+IQQRYLSAIAE E  DK++ +   R + NAVSSLASRWNQGI+ERKV+KT V VRGNV+ AKK+F H+D     K  A+  A  D+GPAEI VED S IPSWAKNQ+KLVIKKENARSSVRVDVKELQGSVLMNAARDGSEAERTNKVEH GNVKAALAMWGKTA+EDAK LAKKKE  ER+R + +++RK+REAEERA   KAAV+ FA M+L+DMT+EPS+E+E+I FLERKI L+
Sbjct:    1 MSVEALRDKLSEREAKLDGLRAKLKAAKERAARPKPKSTISSIQQRYLSAIAESE--DKEVHKPQIRASTNAVSSLASRWNQGIEERKVEKTRVSVRGNVSGAKKNFVHNDAHVVGKSVAKLVADVDRGPAEIEVEDDSHIPSWAKNQQKLVIKKENARSSVRVDVKELQGSVLMNAARDGSEAERTNKVEHVGNVKAALAMWGKTADEDAKVLAKKKEXXERQRRLDEKLRKEREAEERARVIKAAVEKFAQMQLSDMTDEPSQELEIIPFLERKITLV 278          
BLAST of Gvermi11527.t1 vs. uniprot
Match: R7QDT3_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QDT3_CHOCR)

HSP 1 Score: 232 bits (592), Expect = 9.360e-72
Identity = 148/299 (49.50%), Postives = 198/299 (66.22%), Query Frame = 0
Query:    2 SVDVLRDTLADREAKLDVIRKKLKQAKERAARPKPKPTISTIQQRYLSAIAELEHKDKDLPRAHARPAANAVSSLASRWNQGIDERKVQKTAVHVRGNVTAAKKSFAHSDVPSAA--KPDARPSARADQGPAEIVVED-GSDIPSWAKNQRKLVIKKENARSSVR-VDVKELQGSVLMNAARDGSEAERTNKVEHAGNVKAALAMWGKTAEEDAKALAKKKELQERERAIQDQMRKQREAEERANAYKAAVQAFASMKLTDM-TEEPSKEVELIAFLERKIALIEHEIKKLHDELAELE 295
            SV  LR+ L  RE +L V+R+K+++A++ A+ P  K +IS IQQRY++A+AEL+ K+K++P+     +   VS+LAS+WNQGI   +V KT V VRG+V   +K+F  SDVP A   +P     +  D GPAE++VED  + +PSWA NQ K VI+KENARSS+R VDVKE+QGSVL NAARDGSEA+  + VE  GNVKAALAMWGKTAEED                                A KAA++ FAS+ L+ +  +EP+KEVEL+A+LERKI L+E EIK   +EL++LE
Sbjct:    4 SVHALRERLHTREHELKVLREKIEKARQAASSPATK-SISAIQQRYMAAVAELDKKEKEIPKPIVNSSTAGVSNLASKWNQGISSAQVTKTRVDVRGDVRGTQKNFNASDVPKATSNQPTKTKKSNVDPGPAELLVEDEDAGLPSWAINQSKKVIRKENARSSIRDVDVKEIQGSVLTNAARDGSEAQGES-VEAKGNVKAALAMWGKTAEEDTXXXXXXXXXXXXXXXXXAIKHXXXXXXXXERAAKAAIERFASLTLSSLPAQEPTKEVELVAYLERKIVLVEKEIKITEEELSKLE 300          
BLAST of Gvermi11527.t1 vs. uniprot
Match: A0A2V3IU39_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IU39_9FLOR)

HSP 1 Score: 75.1 bits (183), Expect = 6.710e-14
Identity = 43/63 (68.25%), Postives = 53/63 (84.13%), Query Frame = 0
Query:  205 KTAEEDAKALAKKKELQERERAIQDQMRKQREAEERANAYKAAVQAFASMKLTDMTEEPSKEV 267
            KT +EDAK LAKKKE +ERE+A Q+++ K+REA+ERA AYK AV+AFA MKL DM EEPSKE+
Sbjct:    6 KTTDEDAKRLAKKKE-EEREKASQEKLGKEREAKERAKAYKRAVEAFAKMKLADMDEEPSKEM 67          
BLAST of Gvermi11527.t1 vs. uniprot
Match: A0A2V3IRH0_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IRH0_9FLOR)

HSP 1 Score: 69.3 bits (168), Expect = 3.000e-11
Identity = 41/60 (68.33%), Postives = 50/60 (83.33%), Query Frame = 0
Query:  205 KTAEEDAKALAKKKELQERERAIQDQMRKQREAEERANAYKAAVQAFASMKLTDMTEEPS 264
            KTA+EDAK LAKK+E +ERE+  Q+++RKQ EAEE A AYK AV+AFA+MKL DM EEPS
Sbjct:   54 KTADEDAKLLAKKEE-EEREKGSQEKLRKQCEAEELAKAYKRAVEAFANMKLADMDEEPS 112          
The following BLAST results are available for this feature:
BLAST of Gvermi11527.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A2V3IJT3_9FLOR7.420e-12572.14Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QDT3_CHOCR9.360e-7249.50Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A2V3IU39_9FLOR6.710e-1468.25Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IRH0_9FLOR3.000e-1168.33Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 270..298
NoneNo IPR availableCOILSCoilCoilcoord: 204..247
NoneNo IPR availableCOILSCoilCoilcoord: 10..30
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 105..138
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 57..79

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_3404contigScGOVlb_3404:733965..734861 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi11527.t1Gvermi11527.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_3404 733965..734861 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi11527.t1 ID=Gvermi11527.t1|Name=Gvermi11527.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=299bp
MSVDVLRDTLADREAKLDVIRKKLKQAKERAARPKPKPTISTIQQRYLSA
IAELEHKDKDLPRAHARPAANAVSSLASRWNQGIDERKVQKTAVHVRGNV
TAAKKSFAHSDVPSAAKPDARPSARADQGPAEIVVEDGSDIPSWAKNQRK
LVIKKENARSSVRVDVKELQGSVLMNAARDGSEAERTNKVEHAGNVKAAL
AMWGKTAEEDAKALAKKKELQERERAIQDQMRKQREAEERANAYKAAVQA
FASMKLTDMTEEPSKEVELIAFLERKIALIEHEIKKLHDELAELEAAE*
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