Gvermi11520.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gvermi11520.t1
Unique Name	Gvermi11520.t1
Type	polypeptide
Organism	Gracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length	446

Homology

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BLAST of Gvermi11520.t1 vs. uniprot
Match: A0A2V3IJZ5_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IJZ5_9FLOR)

HSP 1 Score: 164 bits (415), Expect = 4.250e-42
Identity = 207/383 (54.05%), Postives = 247/383 (64.49%), Query Frame = 0

Query:   79 EDARHYLSRKFRFLRTSERHVLIAVCVAHLKAPGNNHKHGVKVSITPFVDDPDIFIEKMWKYICVEPADENAPALNSAQNGRDHQPAVTRAHSDAAMSEGRSRPHRRRPNRPDRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDRD-RYYAERDSGRY--DTPPDRYGDGRPPEXXXXXXXXXLR------------RPDQRYGERRDRSXXXXXXXXXXXXXXXXXXPRDDRMEKSRDLRDALSRRPRDEGGATRRASDERAQNITNAPSPRGMRRVVDDDEVRRVSEVAGR-DEFEHKPNASAGPGSSVDSKGHEATTKLQHLRSKALASLKKNPSLK 445
            +D +HYL+RK RFL T ERHV+IA+C AHLK P N  K  + ++++PFV +PD F++K+WKY+   P DE  PA ++ QNGR+ +    R  S A++S+GRS             XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    R+ AERDS RY  D  PD         XXXXXXXXX              RPD R+ + R+R                   P   R ++ RDLR+ LSRR +D+    +R   E +++ +N   PRG RR   +DE  R  E  GR DE EHKP+   G GSSVDSKG+EA+ KLQHLRSKALASLKK PS K
Sbjct:   84 DDLKHYLNRKLRFLHTDERHVVIAICTAHLKGPANRRKEAITITLSPFVREPDTFVDKLWKYLETAPPDEPPPAASNLQNGREARRHSPRPPSQASLSDGRSXXXXXGTKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRHPAERDSRRYEADRDPDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYGRPDSRHADERERERELERDRTP---------PPHRRGDRPRDLRNELSRRTKDDDRIAQRRHGEASRHASNVSPPRGTRRPAYEDEGSRDHEQGGRRDESEHKPSPG-GQGSSVDSKGNEASMKLQHLRSKALASLKKTPSFK 456

The following BLAST results are available for this feature:

BLAST of Gvermi11520.t1 vs. uniprot

BLAST of Gvermi11520.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A2V3IJZ5_9FLOR	4.250e-42	54.05	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 11..44
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 52..67
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..71
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 208..230
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 255..445
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 381..406
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 152..232
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 192..207
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 257..364

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
ScGOVlb_3404	contig	ScGOVlb_3404:676637..677974 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gvermi11520.t1	Gvermi11520.t1	Gracilaria vermiculophylla HapMaleFtJ_2017 male	mRNA	ScGOVlb_3404 676637..677974 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gvermi11520.t1 ID=Gvermi11520.t1|Name=Gvermi11520.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=446bp
MEAPPSPNEQPYHRQKDRTALSAESGDHPPRASTLDKRRPSDEAIRPPNT
PQRSQSPLPPQSVPPQSVPPQSVAKFNMEDARHYLSRKFRFLRTSERHVL
IAVCVAHLKAPGNNHKHGVKVSITPFVDDPDIFIEKMWKYICVEPADENA
PALNSAQNGRDHQPAVTRAHSDAAMSEGRSRPHRRRPNRPDRSRSRSSSS
VGRYRYHESRDRRRHHERRSRRRRKRADRDRRLDRHYDSDSDDDDRGRRS
RKRRRRHRYSDEESDRDRYYAERDSGRYDTPPDRYGDGRPPEERRRSPPP
PLRRPDQRYGERRDRSPHGRSPDRRNVDDRDRSPPRDDRMEKSRDLRDAL
SRRPRDEGGATRRASDERAQNITNAPSPRGMRRVVDDDEVRRVSEVAGRD
EFEHKPNASAGPGSSVDSKGHEATTKLQHLRSKALASLKKNPSLK*