Gvermi11518.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi11518.t1
Unique NameGvermi11518.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length423
Homology
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BLAST of Gvermi11518.t1 vs. uniprot
Match: A0A2V3IJU3_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IJU3_9FLOR)

HSP 1 Score: 471 bits (1212), Expect = 8.250e-162
Identity = 262/363 (72.18%), Postives = 300/363 (82.64%), Query Frame = 0 
Query:   59 DDENPIRLGKPRISSVTDSDSQSSSPRASIRPDRAANPPLRRKLPDVPKVPPGPPRSXXXXXXXXXXXXXAGSTYSHASVLNLDDLDDDHLLGVRR-LRPTLRQSRSRG--QKCARRAVVLACDEFQPHNRLEPLFQRAVLALTDAVDADALSASAAVASFRAFSPLYTNTERAVIASVFRNVSAQLRREAPTPWRSPLS-GEPPRVVLPDGVDEALMRAVMYGAHILPAAGPETILIRLAGAYHREQLRKRCCKSQRVTVPLSFAMTLTALLAALSRLECSPSFRRLRSRAAVSRAAEPHAVVVVKANYDGAKLWFDVSLHGEAPCTVLFRKPRLMPSRKAPDFEAVVAEVAGVMTEFGDMV 417
            DD+ P+ LGKPRISSVTDS S +SSPR SIRPDR A PPLRR LPDVP +PPGP  +  XXXXXX     A STYSHASVLNLDDLDDDHLLG+R   RPTLR  RS+G  +   RRAVVLA +E+QPHNRLEPLF+R V AL DAVDADAL+A+AAVASFRAFS L+T+ ER VIA +FR+ SA LRREAPTPWRSPL+  +P R+  P G+DE+L+RAV+YGAHILPAAGPETILIRLAG YHREQLRKR  K QRV VPLSF+MTLTALLAALSRLECSP+FRR RSRAA +R  EPHAV+VV+ NYDGA+L FD+SLHGEAPCTVLFRKP+L+ SRK  DF+A+V E+ GV+TEF + V
Sbjct:   67 DDQPPLPLGKPRISSVTDSSSTTSSPRVSIRPDRRATPPLRRHLPDVPVLPPGPIHASDXXXXXX-----AASTYSHASVLNLDDLDDDHLLGIRLPRRPTLRLCRSKGNNRNQPRRAVVLAQNEYQPHNRLEPLFERCVHALCDAVDADALAATAAVASFRAFSQLFTSIERNVIAHLFRSASALLRREAPTPWRSPLNVQQPARLTPPPGMDESLVRAVVYGAHILPAAGPETILIRLAGVYHREQLRKRAAKDQRVLVPLSFSMTLTALLAALSRLECSPAFRRFRSRAATTRTGEPHAVIVVRVNYDGARLSFDISLHGEAPCTVLFRKPKLLASRKTADFDAIVGEIRGVLTEFANSV 424
The following BLAST results are available for this feature:
BLAST of Gvermi11518.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IJU3_9FLOR8.250e-16272.18Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 55..135
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 72..88
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..312
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 313..333
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 334..422

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_3404contigScGOVlb_3404:671454..672722 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi11518.t1Gvermi11518.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_3404 671454..672722 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi11518.t1 ID=Gvermi11518.t1|Name=Gvermi11518.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=423bp
MGAVTIKHPLPRIAALSPVPTIRSITGVDVCPPAATATAQPAPCFRKAPV
VARPLTPFDDENPIRLGKPRISSVTDSDSQSSSPRASIRPDRAANPPLRR
KLPDVPKVPPGPPRSSDDDGGGDDDNDDAGSTYSHASVLNLDDLDDDHLL
GVRRLRPTLRQSRSRGQKCARRAVVLACDEFQPHNRLEPLFQRAVLALTD
AVDADALSASAAVASFRAFSPLYTNTERAVIASVFRNVSAQLRREAPTPW
RSPLSGEPPRVVLPDGVDEALMRAVMYGAHILPAAGPETILIRLAGAYHR
EQLRKRCCKSQRVTVPLSFAMTLTALLAALSRLECSPSFRRLRSRAAVSR
AAEPHAVVVVKANYDGAKLWFDVSLHGEAPCTVLFRKPRLMPSRKAPDFE
AVVAEVAGVMTEFGDMVSAGQA*
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