Gvermi11516.t2 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi11516.t2
Unique NameGvermi11516.t2
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length904
Homology
BLAST of Gvermi11516.t2 vs. uniprot
Match: A0A2V3IJY9_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IJY9_9FLOR)

HSP 1 Score: 1137 bits (2940), Expect = 0.000e+0
Identity = 572/875 (65.37%), Postives = 682/875 (77.94%), Query Frame = 0
Query:   25 VARKRPPTPVSDIPKRARCGRRPDVKQDAFPSWLQEAAAAFVNSTPSLNWTGGFYSWGTWLDTLRDQSLWGSNRGNQPPWRQLVDACRKSGQVCGTAALYRAKNDLVSAIINLVYRKGETNRLSIAQQKPAVERDIMRRVRAVVTRQRRHEAASLTLIRYLDLAFVFSAYKDCRLAQHGKESESFAQINRQVEDELNFLQTSPNAKHIGAVTQRMESYMWQHRWLPWYEQMPHMKDEMLISAREAANAFCNGLPCPKFGVGTGVRGLSRDHLAGAGIMDEWLTTLFDESISPRWKSLAEAYEEATKDWRGEESKLLEEISRRVIEKILEPLTEMNESLESDNCKLVDATPGIVVTQSAKIRGRFTFRLLVELQVHLVMLCEYLHKKFHGRMLPSIEDIHPGVLLYEELSRRIAEVRTHLDDDKAELLILSCLRTPELHGAHTHPSREALQSCKDYQTAAIKAALGPAIMLGCKTPDETVETESVAESDPLIFAAIISEWDPMLAARIVDAAVRIGKNTREQFHNGSGCGLDMYTHRRVLVCDAAIDRCHGDQRAAAHIMMRLGPVWDACVDDKQVGSITLDGLVLLKLAVERGNFEAATAFGNFIGEEQWEIHRKTCGVDRNNEIAINYLCRALTVGDVGAARSLIHLLCSRNHSSSESEIQETRFSPELVKKARESLEVAARDVPAISLFLGYFYSVGATGLDIDCNSALECYKRVLLSNKVNTHFKAHAANNIAVLKALHCNPCDVEHDDVNVSHYLRMAAAATNPKAEANLAALTTVKTNAGDPDLRRAVEMYRRIFHCSAKGSLVTVIQIPEEEELQMTXXXXXXXXXKQELFCQDLKTQGMDLEKYGKVMVQETIQYTMANREGADADKK 899
            + RKR     SD PKRARCG R DVKQ+A P WL +AAAAFVN+TP L WTGGFYSWGTWLDTLR+QSLW S    + PW QLV+ACR S  V GTAALYRAKNDLVSAII++VYR GET RLS ++QKPA ERDIMRR+RAVVTRQRRHEAAS+TLIRYLDLAFVFSAY+DCRLA   +E+   A  NR VE EL FLQ+ P+AK   A TQRMESYMWQHRWLPWY+QMPHM +++LISAREAA+AFC+GL CPKF VGTGVRGLSRDHLAG GIMDEWL TLFDE +SPRW+ LA  YE A KDWRGEE KL+EEISRRVIE+ILEPLTE+++ L+SD+CKLVDATPGIVVTQSAK RGRFTFRLLVEL +HL+M CE+LH +FHG++LPSIEDIHP VLL++ELSRR+A+VRTHL+ D+AE L  SCLR P+LH A+THPS EALQ+CKDYQTAAIKAALGP+ +  C   +E  E E+V+ESDPL+FAAI++EWDP LAARI+DAAVRIGK  RE+F NG  C LD+YTHRR +VCDAAIDRC G++RAAA IM +L PVW     DK VGS T DGL+LLK+AVERGNFEAA A G FIG+EQWE HR+ CGV R+    I YLCRA+  GDVGA+R +IHL+C++    + +   +     ELV+K RE LE+AARDVPAI+L+LGY +SVGA G++ DC  A+  YKRVL SNKVNT FKAHAANN A+LKALHC+  D E D + V+ YLR A    NPKA++NLAAL T    A + +LR+A +MY R+F  + K   V+VIQ       +M           QE FC+DLK++GMDL++YG+V+  ETI Y+      A+A+K+
Sbjct:    1 MTRKRTAPLTSDPPKRARCGPRSDVKQEAVPFWLHDAAAAFVNATPPLKWTGGFYSWGTWLDTLRNQSLWTSEPHTKTPWHQLVEACRISDHVRGTAALYRAKNDLVSAIISIVYRCGETLRLSDSEQKPAAERDIMRRIRAVVTRQRRHEAASITLIRYLDLAFVFSAYRDCRLAHASRET--LAHANRDVEQELLFLQSKPSAKQTAAATQRMESYMWQHRWLPWYQQMPHMSNDLLISAREAAHAFCDGLHCPKFDVGTGVRGLSRDHLAGTGIMDEWLVTLFDEPVSPRWRRLAHVYESAVKDWRGEEGKLMEEISRRVIERILEPLTEISDGLDSDHCKLVDATPGIVVTQSAKKRGRFTFRLLVELNIHLIMFCEHLHARFHGKILPSIEDIHPAVLLFDELSRRVAQVRTHLEPDQAERLFASCLRAPDLHNAYTHPSAEALQNCKDYQTAAIKAALGPSRIASCTKSEEFPEVENVSESDPLMFAAIVAEWDPQLAARIIDAAVRIGKKKREEFLNGHECSLDLYTHRRTVVCDAAIDRCLGNRRAAAEIMNKLRPVWSVFEGDKGVGSFTRDGLLLLKVAVERGNFEAAVALGIFIGDEQWEDHRQACGVQRDYAAGIEYLCRAVLAGDVGASRDVIHLVCNQIAPMNGAPSLKGDSRCELVQKVRECLEIAARDVPAIALYLGYLHSVGAPGVESDCKFAMGYYKRVLQSNKVNTEFKAHAANNTAILKALHCDSIDCE-DGITVAQYLRTAGIVGNPKADSNLAALMTANA-AEEAELRKAAQMYERVFQANGKEVAVSVIQ-NSGGGTEMNVFELLVKNEMQEAFCRDLKSEGMDLQRYGRVLANETIAYS-TKAVKAEAEKR 869          
BLAST of Gvermi11516.t2 vs. uniprot
Match: R7QT41_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QT41_CHOCR)

HSP 1 Score: 774 bits (1999), Expect = 8.520e-267
Identity = 422/861 (49.01%), Postives = 558/861 (64.81%), Query Frame = 0
Query:   33 PVSDIP-KRARC-GRRPDV-KQDAFPSWLQEAAAAFVNSTPSLNWTGGFYSWGTWLDTLRDQSLWGSNRGNQ---PPWRQLVDACRKSGQVCGTAALYRAKNDLVSAIINLVYRKGETNRLSIAQQKPAVERDIMRRVRAVVTRQRRHEAASLTLIRYLDLAFVFSAYKDCRLAQHGKESESFAQINRQVEDELNFLQTSPNAKHIGAVTQRMESYMWQHRWLPWYEQMPHMKDEMLISAREAANAFCNGLPCPKFGVGTGVRGLSRDHLAGAGIMDEWLTTLFDESISPRWKSLAEAYEEATKDWRGEESKLLEEISRRVIEKILEPLTEMNESLESDNCKLVDATPGIVVTQSAKIRGRFTFRLLVELQVHLVMLCEYLHKKFHGRMLPSIEDIHPGVLLYEELSRRIAEVRTHLDDDKAELLILSCLRTPELHGAHTHPSREALQSCKDYQTAAIKAALGPAIMLGCKTPDETVETESVAESDPLIFAAIISEWDPMLAARIVDAAVRIGKNTREQFHNGSGCGLDMYTHRRVLVCDAAIDRCHGDQRAAAHIMMRLGPVWDACVDDKQVGSITLDGLVLLKLAVERGNFEAATAFGNFIGEEQWEIHRKTCGVDRNNEIAINYLCRALTVGDVGAARSLIHLLCSRNHSSSESEIQETRFSPELVKKARESLEVAARDVPAISLFLGYFYSVGATGLDIDCNSALECYKRVLLSNKVNTHFKAHAANNIAVLKALHCNPCDVEHDDVNVS-HYLRMAAAATNPKAEANLAALTTVKTNAGDPDLRRAVEMYRRIFHCSAKGSLVTVIQIPEEEELQMTXXXXXXXXXKQELFCQDLKTQGMDLEKYGKVMVQETIQY 886
            P  D+P KR R   R+ ++ K +A P WL EAA AFV  TP+L WTGGFYSWGTWLD LR  S+W +   N    PPWR L+DAC+ S QV GTAALY AK+DLV+ IINLV+RKGE  RL+   +  A ERD+MRRVRAVVTRQRRHEA SLTLIR+LDLAFVFSA+KDCR+A     + S  Q+   VE EL FL   P+AK I  +T RME YMW +RWLPWYEQ+P ++D+M+I AREAA AFC GLP P+   GTGVRGLSRDHLAG+  MDEWL  L D S S RW  L+  YE A +D RGEE  LLEE SRRV++ +LEPLTE+ E L+S + KLVDA PGI+V+QS  I GRFTFR L+EL +HL M  EYLH  + GR LPSI++IH G +LYEE+ RR+ EVR  ++ DK + L+  CL T EL+         AL+    YQ  A+KAA G AI+     P+       + ++DPL +AAI++EWDP LAA+IVDAAVRIG   R +F +G   GLD+YT+RRV+VCDAA  R  GD +AAA  M RL PVWD C  DK  G   + G++ L+ A E GNFEA+  +G F+    W   R+ CG+  + E  I ++C+A+ +GD  AA  L+HLL S N +  +  I E   +P+LV  + + L+ A R+ P++ LF+GY YS+GAT + +DC  A + Y+ VL S   +  F+A+AANN+ VL+ L+         + N +  ++R +A+A +PKAE+NL AL  ++++     L  A + Y +        + VT IQ   +   ++           +E FC++L+ +GM +E+YG V+  ET+ Y
Sbjct:   16 PDKDVPLKRLRVLPRKAELTKPEAVPQWLNEAATAFVARTPTLRWTGGFYSWGTWLDDLRQLSVWTTTPENTNIAPPWRILIDACKASRQVRGTAALYAAKSDLVNIIINLVFRKGEEQRLTHVNETAAAERDVMRRVRAVVTRQRRHEALSLTLIRFLDLAFVFSAFKDCRVAGAIALNRSAEQVAADVEAELLFLNRKPSAKEIRDLTNRMEQYMWDNRWLPWYEQVPGVRDDMVIRAREAALAFCKGLPFPQIRFGTGVRGLSRDHLAGSKSMDEWLLLLLDPSQSERWSRLSVIYESAVRDERGEEDPLLEETSRRVLQTVLEPLTELREGLDSAHSKLVDAAPGIIVSQSVNIPGRFTFRQLLELYIHLSMFGEYLHTTYRGRALPSIDEIHTGAVLYEEIRRRVWEVRCVINADKMDTLLTWCLATQELYNG-----MPALERRISYQQIAVKAAFGSAIIRHAANPNAPFPEPFIMQNDPLSYAAIVAEWDPPLAAKIVDAAVRIGPAIRARFESGHSDGLDLYTYRRVVVCDAARQRSAGDLQAAARTMARLHPVWDVCEPDKAYGPFDMRGVMRLQAAAEEGNFEASAVYGCFLCSLDWIDRRRQCGIPEDMERGIRFICKAVALGDTAAAADLMHLLLS-NPTRIDGHIWE--MTPQLVWHSVQCLKEAVREEPSMRLFVGYLYSLGATDVPVDCRVAAKAYQCVLESVTSSPRFQAYAANNLGVLRLLNTPGASSALPEANKAFEFIRASASAADPKAESNLGALLCLESSDSYQQLEMAKQTYWQCLSNRDYNNPVTTIQARRDTS-EVNVYKMRIAPQLREKFCRELRAEGMVMERYGTVLETETVPY 867          
The following BLAST results are available for this feature:
BLAST of Gvermi11516.t2 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IJY9_9FLOR0.000e+065.37Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QT41_CHOCR8.520e-26749.01Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 429..449
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 33..48
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..48
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 598..832
e-value: 1.3E-11
score: 45.6

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_3404contigScGOVlb_3404:658502..661213 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi11516.t2Gvermi11516.t2Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_3404 658502..661213 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi11516.t2 ID=Gvermi11516.t2|Name=Gvermi11516.t2|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=904bp
MLVVNNAQPPSHSAAAHDAHQSPPVARKRPPTPVSDIPKRARCGRRPDVK
QDAFPSWLQEAAAAFVNSTPSLNWTGGFYSWGTWLDTLRDQSLWGSNRGN
QPPWRQLVDACRKSGQVCGTAALYRAKNDLVSAIINLVYRKGETNRLSIA
QQKPAVERDIMRRVRAVVTRQRRHEAASLTLIRYLDLAFVFSAYKDCRLA
QHGKESESFAQINRQVEDELNFLQTSPNAKHIGAVTQRMESYMWQHRWLP
WYEQMPHMKDEMLISAREAANAFCNGLPCPKFGVGTGVRGLSRDHLAGAG
IMDEWLTTLFDESISPRWKSLAEAYEEATKDWRGEESKLLEEISRRVIEK
ILEPLTEMNESLESDNCKLVDATPGIVVTQSAKIRGRFTFRLLVELQVHL
VMLCEYLHKKFHGRMLPSIEDIHPGVLLYEELSRRIAEVRTHLDDDKAEL
LILSCLRTPELHGAHTHPSREALQSCKDYQTAAIKAALGPAIMLGCKTPD
ETVETESVAESDPLIFAAIISEWDPMLAARIVDAAVRIGKNTREQFHNGS
GCGLDMYTHRRVLVCDAAIDRCHGDQRAAAHIMMRLGPVWDACVDDKQVG
SITLDGLVLLKLAVERGNFEAATAFGNFIGEEQWEIHRKTCGVDRNNEIA
INYLCRALTVGDVGAARSLIHLLCSRNHSSSESEIQETRFSPELVKKARE
SLEVAARDVPAISLFLGYFYSVGATGLDIDCNSALECYKRVLLSNKVNTH
FKAHAANNIAVLKALHCNPCDVEHDDVNVSHYLRMAAAATNPKAEANLAA
LTTVKTNAGDPDLRRAVEMYRRIFHCSAKGSLVTVIQIPEEEELQMTVTE
IDVDKDKQELFCQDLKTQGMDLEKYGKVMVQETIQYTMANREGADADKKK
PSL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf