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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Seed ortholog | 118161.KB235922_gene1664 |
| PFAMs | Big_5,GSDH,Malectin,TIG |
| Max annot lvl | 1117|Cyanobacteria |
| Evalue | 3.61e-52 |
| EggNOG OGs | COG2133@1|root,COG2982@1|root,COG3210@1|root,COG2133@2|Bacteria,COG2982@2|Bacteria,COG3210@2|Bacteria,1G17Y@1117|Cyanobacteria |
| Description | Glucose / Sorbosone dehydrogenase |
| COG category | G |
Relationships
This mRNA is a part of the following gene feature(s):
The following start_codon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following stop_codon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Gvermi867.t1 ID=Gvermi867.t1|Name=Gvermi867.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=mRNA|length=867bp MTHLSCLLVALLLTAVVAPAFAAPKDNNGGFDHRAHAVPGGPYNVQDDDS DGSARVTLNGELSHSHYFNPKTGATGRVTKFFWSINKKVVCKSMICNIKF PFGRTRVELRVIDNTGDSATASTFVNVFKGAKPKLRYWFYPDQGWVPDSV GAGQPKYSMTEPALNMHSPGIFPGFLNRRKFSMRVLGNIDMHRQGNYRFR LRVIGGTGTMWVGNTRVLVGANKDVFSRPMMFTRGSKRLHILFRRSNARA PKPKLILSWQVPGQNGWSVIPGKFFSHNPASMKPVVHAVNPTRAQVGSVI TVVGSSFVNIKSVHIGKHTCAGPTSKNQFTVKCVVPGVTGKYQVFVRTSM GVSNSVPLSITAGSFGSKFGSAGGGVGPVGYFQPVRFRNDFLKRNGKVFN VPQLTSITLGPDNQYYIGSLGGFVHVVGTDLYNQVKGYCKSERVGKSRSV LGVAFNPAENDRLRLYASTSVLYWGTKKLLPFTRGWHNGQVIAMQKSQKR CLTRVKTVVSGLPVSNYDHSVNGIAFDMGGNLLISVGGGTNAGVSKKGDP LGGVPDSPLSGAVLWAPIRKRNFNGKVAYSQYADPGRANKVRGDVFVYAA GLRNSYSNLAHSNGHIYATDNGGNAKFGARSTGCRSEGGIGTEPDTLKKL KRGGFYGYANRNRGRYDGRQCRHRSPQLKEGGYDRPIAKMESSTTGLLEY TANTFGAQMRGDLLATKFAVSGSGKVYRVQLTGSGNVKSIFNLAFHSGLS AAMSPVGGLVMPRVYQGRIAVLLPNEKNPGRMVVTSVNPFRGPKRGGGRI TITGWNLKPPLSITVGGRPCKNVGGYRGGRSVSCTVPRGSGRAAVVVKRF GKQSKSFGYEYVYMNV* back to topspliced messenger RNA >Gvermi867.t1 ID=Gvermi867.t1|Name=Gvermi867.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=mRNA|length=2601bp|location=Sequence derived from alignment at ScGOVlb_2952:733319..735919+ (Gracilaria vermiculophylla HapMaleFtJ_2017 male)|Notes=Excludes all bases but those of type(s): exon.
ATGACTCACCTGTCGTGCCTGCTTGTGGCACTGCTGTTGACGGCTGTTGT AGCCCCCGCCTTCGCCGCCCCGAAAGACAACAATGGAGGCTTTGACCATC GTGCCCACGCCGTCCCGGGCGGTCCGTACAACGTTCAAGACGACGACTCC GACGGCTCCGCCAGGGTCACTCTCAACGGCGAGCTCTCCCACAGCCACTA CTTCAACCCCAAGACCGGTGCCACGGGAAGAGTCACCAAGTTCTTCTGGA GCATCAACAAGAAGGTCGTGTGCAAGTCCATGATTTGCAACATCAAGTTC CCGTTCGGCAGGACGCGCGTCGAGCTGCGCGTCATCGACAACACCGGCGA CTCGGCCACTGCCAGCACGTTTGTCAACGTCTTCAAGGGCGCCAAGCCCA AGCTCAGGTACTGGTTCTACCCGGACCAGGGCTGGGTGCCGGACTCGGTC GGCGCCGGCCAGCCCAAGTACTCCATGACCGAGCCCGCGCTCAACATGCA CTCGCCGGGCATCTTCCCTGGCTTCCTCAACCGGCGCAAGTTCTCCATGC GCGTGCTTGGCAACATCGACATGCACAGGCAGGGCAACTACCGCTTTCGC CTCAGGGTCATTGGCGGCACCGGCACCATGTGGGTCGGAAACACCAGGGT GCTGGTCGGAGCCAACAAGGATGTCTTTTCCAGGCCCATGATGTTCACAA GGGGTAGCAAAAGGCTTCACATTTTGTTCAGGCGTTCCAACGCCCGAGCG CCCAAGCCCAAACTTATCCTCTCGTGGCAAGTTCCCGGTCAAAATGGCTG GTCTGTCATCCCGGGCAAGTTCTTTTCGCACAACCCGGCCAGCATGAAGC CCGTCGTGCACGCGGTCAACCCGACCAGGGCTCAGGTAGGAAGCGTGATC ACCGTTGTCGGAAGCAGCTTTGTCAACATCAAGTCAGTGCATATCGGCAA GCACACGTGTGCTGGACCGACGTCCAAGAACCAGTTTACCGTGAAATGTG TTGTTCCTGGCGTTACTGGCAAGTATCAGGTGTTCGTGAGGACCTCCATG GGTGTATCCAACTCCGTCCCGCTCTCTATCACCGCTGGTTCGTTTGGAAG CAAGTTCGGGTCTGCTGGGGGTGGTGTAGGGCCGGTCGGTTATTTCCAGC CTGTACGTTTCAGGAATGACTTCCTCAAGAGGAACGGCAAGGTGTTCAAT GTACCGCAGCTCACTTCAATCACGCTTGGACCTGACAACCAGTACTACAT AGGCAGTCTTGGCGGTTTTGTGCACGTGGTTGGCACTGACCTCTACAACC AAGTGAAGGGCTACTGCAAGTCCGAAAGGGTTGGCAAGTCCAGAAGTGTG CTGGGCGTGGCGTTCAACCCCGCGGAGAACGACCGACTTCGGCTTTACGC CTCGACGAGCGTGTTGTACTGGGGTACCAAGAAGCTTCTTCCGTTTACTC GTGGGTGGCACAACGGGCAGGTTATTGCCATGCAAAAGAGCCAAAAGAGG TGTCTCACGCGCGTGAAGACCGTCGTTAGCGGTCTGCCGGTTTCCAACTA CGACCATTCCGTGAACGGCATTGCGTTCGATATGGGCGGTAACTTGCTCA TTTCTGTCGGTGGCGGCACCAACGCGGGCGTGAGCAAGAAGGGTGATCCT CTCGGCGGTGTCCCGGACTCGCCGTTGTCGGGCGCCGTGCTGTGGGCTCC GATACGCAAGAGGAACTTCAACGGAAAGGTTGCTTACAGTCAGTATGCCG ACCCGGGGAGAGCCAATAAGGTTCGAGGTGACGTGTTCGTGTACGCTGCT GGTCTGCGAAACTCCTACTCAAACCTTGCTCACTCAAATGGTCACATATA TGCCACGGATAACGGTGGCAACGCCAAGTTCGGCGCCCGCAGTACTGGGT GCCGTAGTGAGGGCGGCATTGGCACCGAGCCTGACACGCTCAAGAAACTG AAGAGAGGCGGATTCTACGGATATGCCAACAGAAACCGTGGACGATACGA CGGTCGCCAATGCAGACACCGCTCGCCGCAGCTCAAAGAAGGCGGGTACG ACAGGCCCATTGCCAAGATGGAGTCCAGTACCACTGGTCTACTTGAGTAC ACGGCCAATACTTTCGGCGCTCAGATGAGAGGAGACCTGTTGGCCACCAA GTTTGCTGTGTCGGGAAGCGGTAAGGTCTACAGGGTTCAACTAACGGGAA GCGGTAATGTCAAGTCTATCTTCAACCTTGCTTTCCATTCCGGTCTGTCC GCTGCCATGTCGCCGGTCGGTGGCCTTGTGATGCCTCGCGTGTACCAGGG AAGGATCGCCGTGCTGCTGCCCAACGAAAAGAACCCGGGACGAATGGTCG TCACCAGCGTGAACCCCTTCCGCGGCCCCAAGCGTGGAGGCGGTAGAATC ACCATCACCGGGTGGAATCTGAAACCTCCGCTATCCATCACAGTTGGTGG AAGGCCCTGTAAGAACGTAGGAGGGTACAGGGGAGGCCGAAGCGTGAGTT GCACTGTTCCGAGAGGTTCTGGCAGGGCCGCTGTGGTGGTGAAGCGCTTC GGAAAGCAATCGAAGAGCTTTGGATATGAGTATGTCTACATGAATGTGTA G back to topprotein sequence of Gvermi867.t1 >Gvermi867.t1 ID=Gvermi867.t1|Name=Gvermi867.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=867bp
MTHLSCLLVALLLTAVVAPAFAAPKDNNGGFDHRAHAVPGGPYNVQDDDS DGSARVTLNGELSHSHYFNPKTGATGRVTKFFWSINKKVVCKSMICNIKF PFGRTRVELRVIDNTGDSATASTFVNVFKGAKPKLRYWFYPDQGWVPDSV GAGQPKYSMTEPALNMHSPGIFPGFLNRRKFSMRVLGNIDMHRQGNYRFR LRVIGGTGTMWVGNTRVLVGANKDVFSRPMMFTRGSKRLHILFRRSNARA PKPKLILSWQVPGQNGWSVIPGKFFSHNPASMKPVVHAVNPTRAQVGSVI TVVGSSFVNIKSVHIGKHTCAGPTSKNQFTVKCVVPGVTGKYQVFVRTSM GVSNSVPLSITAGSFGSKFGSAGGGVGPVGYFQPVRFRNDFLKRNGKVFN VPQLTSITLGPDNQYYIGSLGGFVHVVGTDLYNQVKGYCKSERVGKSRSV LGVAFNPAENDRLRLYASTSVLYWGTKKLLPFTRGWHNGQVIAMQKSQKR CLTRVKTVVSGLPVSNYDHSVNGIAFDMGGNLLISVGGGTNAGVSKKGDP LGGVPDSPLSGAVLWAPIRKRNFNGKVAYSQYADPGRANKVRGDVFVYAA GLRNSYSNLAHSNGHIYATDNGGNAKFGARSTGCRSEGGIGTEPDTLKKL KRGGFYGYANRNRGRYDGRQCRHRSPQLKEGGYDRPIAKMESSTTGLLEY TANTFGAQMRGDLLATKFAVSGSGKVYRVQLTGSGNVKSIFNLAFHSGLS AAMSPVGGLVMPRVYQGRIAVLLPNEKNPGRMVVTSVNPFRGPKRGGGRI TITGWNLKPPLSITVGGRPCKNVGGYRGGRSVSCTVPRGSGRAAVVVKRF GKQSKSFGYEYVYMNV* back to topmRNA from alignment at ScGOVlb_2952:733319..735919+ Legend: start_codonpolypeptideCDSexonstop_codon Hold the cursor over a type above to highlight its positions in the sequence below. >Gvermi867.t1 ID=Gvermi867.t1|Name=Gvermi867.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=mRNA|length=2601bp|location=Sequence derived from alignment at ScGOVlb_2952:733319..735919+ (Gracilaria vermiculophylla HapMaleFtJ_2017 male) ATGACTCACCTGTCGTGCCTGCTTGTGGCACTGCTGTTGACGGCTGTTGT
AGCCCCCGCCTTCGCCGCCCCGAAAGACAACAATGGAGGCTTTGACCATC
GTGCCCACGCCGTCCCGGGCGGTCCGTACAACGTTCAAGACGACGACTCC
GACGGCTCCGCCAGGGTCACTCTCAACGGCGAGCTCTCCCACAGCCACTA
CTTCAACCCCAAGACCGGTGCCACGGGAAGAGTCACCAAGTTCTTCTGGA
GCATCAACAAGAAGGTCGTGTGCAAGTCCATGATTTGCAACATCAAGTTC
CCGTTCGGCAGGACGCGCGTCGAGCTGCGCGTCATCGACAACACCGGCGA
CTCGGCCACTGCCAGCACGTTTGTCAACGTCTTCAAGGGCGCCAAGCCCA
AGCTCAGGTACTGGTTCTACCCGGACCAGGGCTGGGTGCCGGACTCGGTC
GGCGCCGGCCAGCCCAAGTACTCCATGACCGAGCCCGCGCTCAACATGCA
CTCGCCGGGCATCTTCCCTGGCTTCCTCAACCGGCGCAAGTTCTCCATGC
GCGTGCTTGGCAACATCGACATGCACAGGCAGGGCAACTACCGCTTTCGC
CTCAGGGTCATTGGCGGCACCGGCACCATGTGGGTCGGAAACACCAGGGT
GCTGGTCGGAGCCAACAAGGATGTCTTTTCCAGGCCCATGATGTTCACAA
GGGGTAGCAAAAGGCTTCACATTTTGTTCAGGCGTTCCAACGCCCGAGCG
CCCAAGCCCAAACTTATCCTCTCGTGGCAAGTTCCCGGTCAAAATGGCTG
GTCTGTCATCCCGGGCAAGTTCTTTTCGCACAACCCGGCCAGCATGAAGC
CCGTCGTGCACGCGGTCAACCCGACCAGGGCTCAGGTAGGAAGCGTGATC
ACCGTTGTCGGAAGCAGCTTTGTCAACATCAAGTCAGTGCATATCGGCAA
GCACACGTGTGCTGGACCGACGTCCAAGAACCAGTTTACCGTGAAATGTG
TTGTTCCTGGCGTTACTGGCAAGTATCAGGTGTTCGTGAGGACCTCCATG
GGTGTATCCAACTCCGTCCCGCTCTCTATCACCGCTGGTTCGTTTGGAAG
CAAGTTCGGGTCTGCTGGGGGTGGTGTAGGGCCGGTCGGTTATTTCCAGC
CTGTACGTTTCAGGAATGACTTCCTCAAGAGGAACGGCAAGGTGTTCAAT
GTACCGCAGCTCACTTCAATCACGCTTGGACCTGACAACCAGTACTACAT
AGGCAGTCTTGGCGGTTTTGTGCACGTGGTTGGCACTGACCTCTACAACC
AAGTGAAGGGCTACTGCAAGTCCGAAAGGGTTGGCAAGTCCAGAAGTGTG
CTGGGCGTGGCGTTCAACCCCGCGGAGAACGACCGACTTCGGCTTTACGC
CTCGACGAGCGTGTTGTACTGGGGTACCAAGAAGCTTCTTCCGTTTACTC
GTGGGTGGCACAACGGGCAGGTTATTGCCATGCAAAAGAGCCAAAAGAGG
TGTCTCACGCGCGTGAAGACCGTCGTTAGCGGTCTGCCGGTTTCCAACTA
CGACCATTCCGTGAACGGCATTGCGTTCGATATGGGCGGTAACTTGCTCA
TTTCTGTCGGTGGCGGCACCAACGCGGGCGTGAGCAAGAAGGGTGATCCT
CTCGGCGGTGTCCCGGACTCGCCGTTGTCGGGCGCCGTGCTGTGGGCTCC
GATACGCAAGAGGAACTTCAACGGAAAGGTTGCTTACAGTCAGTATGCCG
ACCCGGGGAGAGCCAATAAGGTTCGAGGTGACGTGTTCGTGTACGCTGCT
GGTCTGCGAAACTCCTACTCAAACCTTGCTCACTCAAATGGTCACATATA
TGCCACGGATAACGGTGGCAACGCCAAGTTCGGCGCCCGCAGTACTGGGT
GCCGTAGTGAGGGCGGCATTGGCACCGAGCCTGACACGCTCAAGAAACTG
AAGAGAGGCGGATTCTACGGATATGCCAACAGAAACCGTGGACGATACGA
CGGTCGCCAATGCAGACACCGCTCGCCGCAGCTCAAAGAAGGCGGGTACG
ACAGGCCCATTGCCAAGATGGAGTCCAGTACCACTGGTCTACTTGAGTAC
ACGGCCAATACTTTCGGCGCTCAGATGAGAGGAGACCTGTTGGCCACCAA
GTTTGCTGTGTCGGGAAGCGGTAAGGTCTACAGGGTTCAACTAACGGGAA
GCGGTAATGTCAAGTCTATCTTCAACCTTGCTTTCCATTCCGGTCTGTCC
GCTGCCATGTCGCCGGTCGGTGGCCTTGTGATGCCTCGCGTGTACCAGGG
AAGGATCGCCGTGCTGCTGCCCAACGAAAAGAACCCGGGACGAATGGTCG
TCACCAGCGTGAACCCCTTCCGCGGCCCCAAGCGTGGAGGCGGTAGAATC
ACCATCACCGGGTGGAATCTGAAACCTCCGCTATCCATCACAGTTGGTGG
AAGGCCCTGTAAGAACGTAGGAGGGTACAGGGGAGGCCGAAGCGTGAGTT
GCACTGTTCCGAGAGGTTCTGGCAGGGCCGCTGTGGTGGTGAAGCGCTTC
GGAAAGCAATCGAAGAGCTTTGGATATGAGTATGTCTACATGAATGTGTA
G back to topCoding sequence (CDS) from alignment at ScGOVlb_2952:733319..735919+ >Gvermi867.t1 ID=Gvermi867.t1|Name=Gvermi867.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=CDS|length=2601bp|location=Sequence derived from alignment at ScGOVlb_2952:733319..735919+ (Gracilaria vermiculophylla HapMaleFtJ_2017 male) ATGACTCACCTGTCGTGCCTGCTTGTGGCACTGCTGTTGACGGCTGTTGT AGCCCCCGCCTTCGCCGCCCCGAAAGACAACAATGGAGGCTTTGACCATC GTGCCCACGCCGTCCCGGGCGGTCCGTACAACGTTCAAGACGACGACTCC GACGGCTCCGCCAGGGTCACTCTCAACGGCGAGCTCTCCCACAGCCACTA CTTCAACCCCAAGACCGGTGCCACGGGAAGAGTCACCAAGTTCTTCTGGA GCATCAACAAGAAGGTCGTGTGCAAGTCCATGATTTGCAACATCAAGTTC CCGTTCGGCAGGACGCGCGTCGAGCTGCGCGTCATCGACAACACCGGCGA CTCGGCCACTGCCAGCACGTTTGTCAACGTCTTCAAGGGCGCCAAGCCCA AGCTCAGGTACTGGTTCTACCCGGACCAGGGCTGGGTGCCGGACTCGGTC GGCGCCGGCCAGCCCAAGTACTCCATGACCGAGCCCGCGCTCAACATGCA CTCGCCGGGCATCTTCCCTGGCTTCCTCAACCGGCGCAAGTTCTCCATGC GCGTGCTTGGCAACATCGACATGCACAGGCAGGGCAACTACCGCTTTCGC CTCAGGGTCATTGGCGGCACCGGCACCATGTGGGTCGGAAACACCAGGGT GCTGGTCGGAGCCAACAAGGATGTCTTTTCCAGGCCCATGATGTTCACAA GGGGTAGCAAAAGGCTTCACATTTTGTTCAGGCGTTCCAACGCCCGAGCG CCCAAGCCCAAACTTATCCTCTCGTGGCAAGTTCCCGGTCAAAATGGCTG GTCTGTCATCCCGGGCAAGTTCTTTTCGCACAACCCGGCCAGCATGAAGC CCGTCGTGCACGCGGTCAACCCGACCAGGGCTCAGGTAGGAAGCGTGATC ACCGTTGTCGGAAGCAGCTTTGTCAACATCAAGTCAGTGCATATCGGCAA GCACACGTGTGCTGGACCGACGTCCAAGAACCAGTTTACCGTGAAATGTG TTGTTCCTGGCGTTACTGGCAAGTATCAGGTGTTCGTGAGGACCTCCATG GGTGTATCCAACTCCGTCCCGCTCTCTATCACCGCTGGTTCGTTTGGAAG CAAGTTCGGGTCTGCTGGGGGTGGTGTAGGGCCGGTCGGTTATTTCCAGC CTGTACGTTTCAGGAATGACTTCCTCAAGAGGAACGGCAAGGTGTTCAAT GTACCGCAGCTCACTTCAATCACGCTTGGACCTGACAACCAGTACTACAT AGGCAGTCTTGGCGGTTTTGTGCACGTGGTTGGCACTGACCTCTACAACC AAGTGAAGGGCTACTGCAAGTCCGAAAGGGTTGGCAAGTCCAGAAGTGTG CTGGGCGTGGCGTTCAACCCCGCGGAGAACGACCGACTTCGGCTTTACGC CTCGACGAGCGTGTTGTACTGGGGTACCAAGAAGCTTCTTCCGTTTACTC GTGGGTGGCACAACGGGCAGGTTATTGCCATGCAAAAGAGCCAAAAGAGG TGTCTCACGCGCGTGAAGACCGTCGTTAGCGGTCTGCCGGTTTCCAACTA CGACCATTCCGTGAACGGCATTGCGTTCGATATGGGCGGTAACTTGCTCA TTTCTGTCGGTGGCGGCACCAACGCGGGCGTGAGCAAGAAGGGTGATCCT CTCGGCGGTGTCCCGGACTCGCCGTTGTCGGGCGCCGTGCTGTGGGCTCC GATACGCAAGAGGAACTTCAACGGAAAGGTTGCTTACAGTCAGTATGCCG ACCCGGGGAGAGCCAATAAGGTTCGAGGTGACGTGTTCGTGTACGCTGCT GGTCTGCGAAACTCCTACTCAAACCTTGCTCACTCAAATGGTCACATATA TGCCACGGATAACGGTGGCAACGCCAAGTTCGGCGCCCGCAGTACTGGGT GCCGTAGTGAGGGCGGCATTGGCACCGAGCCTGACACGCTCAAGAAACTG AAGAGAGGCGGATTCTACGGATATGCCAACAGAAACCGTGGACGATACGA CGGTCGCCAATGCAGACACCGCTCGCCGCAGCTCAAAGAAGGCGGGTACG ACAGGCCCATTGCCAAGATGGAGTCCAGTACCACTGGTCTACTTGAGTAC ACGGCCAATACTTTCGGCGCTCAGATGAGAGGAGACCTGTTGGCCACCAA GTTTGCTGTGTCGGGAAGCGGTAAGGTCTACAGGGTTCAACTAACGGGAA GCGGTAATGTCAAGTCTATCTTCAACCTTGCTTTCCATTCCGGTCTGTCC GCTGCCATGTCGCCGGTCGGTGGCCTTGTGATGCCTCGCGTGTACCAGGG AAGGATCGCCGTGCTGCTGCCCAACGAAAAGAACCCGGGACGAATGGTCG TCACCAGCGTGAACCCCTTCCGCGGCCCCAAGCGTGGAGGCGGTAGAATC ACCATCACCGGGTGGAATCTGAAACCTCCGCTATCCATCACAGTTGGTGG AAGGCCCTGTAAGAACGTAGGAGGGTACAGGGGAGGCCGAAGCGTGAGTT GCACTGTTCCGAGAGGTTCTGGCAGGGCCGCTGTGGTGGTGAAGCGCTTC GGAAAGCAATCGAAGAGCTTTGGATATGAGTATGTCTACATGAATGTGTA G back to top
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