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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Seed ortholog | 64363.EME44304 |
| PFAMs | SAC3_GANP |
| Max annot lvl | 4751|Fungi |
| GOs | GO:0000375,GO:0000377,GO:0000398,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0006139,GO:0006396,GO:0006397,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008380,GO:0009987,GO:0010467,GO:0016070,GO:0016071,GO:0034641,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:1901360 |
| Evalue | 2.79e-41 |
| EggNOG OGs | KOG1861@1|root,KOG1861@2759|Eukaryota,38BJF@33154|Opisthokonta,3NVGE@4751|Fungi,3QM9B@4890|Ascomycota,1ZY7E@147541|Dothideomycetes,3MJS0@451867|Dothideomycetidae |
| Description | SAC3/GANP family |
| COG category | K |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following start_codon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following intron feature(s) are a part of this mRNA:
The following stop_codon feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Gvermi8218.t1 ID=Gvermi8218.t1|Name=Gvermi8218.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=mRNA|length=630bp LDEPLENRLKATHDGLLSNGLKARGAAEKQHDKTIKEAAYAVSDRVPVYY TPGGLKNGRKLRSPWQGSYRVLEKISHLGYVLQAGKSAEVARVHVTRLRK FEEHFKELGTRQGGVFTDSRSCGHHNGYPHLPHVNRYPTRQPFVPPPQDY SAFDSDPLRAAPPFVRKNNPSTRGKKRTQQGDRYWNSTDRSKKRPKQSYD EYVKKQATSGPVILQSSRSQPFPPRPKPSPIVPSALSGNRFASHLPLSAA AKAIWNASRVQNPTVGHLHDRDFRIRDLHHSSPNHIHSVADLDDESRFEP IVGTSQNIEKEYLRLTSAPKPEEVRPPSVLVKALAHIKSSWHNSQRDYDW VCRQIKAVRQDYRVQHISTPEVVDVYQTHARIALANNDLGEFNTCVAQLQ ELFDKIEVNERIQDEFFAYRIVYNIIVQAPEWEQAKMLSKLSSVERSRRA TRFALKVRDLVITGNYNKFFKICSNPPKKTMLSYLLVHLYDRMRFHALSV MTTSYGSVPKAFMSVAYILDLLGWTHASKMDDKQETVNMEDFFSSSDEQI LTQLRSLNLMSRQPWMYEALSFLVAANVAFAKQENGDGSDSFHSIMVDFT TTKSQGVRRPKTATKLITHAGTDSVDLLK* back to topspliced messenger RNA >Gvermi8218.t1 ID=Gvermi8218.t1|Name=Gvermi8218.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=mRNA|length=1890bp|location=Sequence derived from alignment at ScGOVlb_24226:1615305..1619615+ (Gracilaria vermiculophylla HapMaleFtJ_2017 male)|Notes=Excludes all bases but those of type(s): exon.
TTGGATGAACCTCTTGAGAATCGTCTCAAGGCCACCCATGATGGACTTCT TTCCAACGGTTTGAAGGCAAGAGGTGCTGCGGAAAAGCAGCATGACAAGA CTATCAAGGAAGCAGCCTACGCAGTTAGTGACAGGGTTCCTGTCTACTAC ACGCCGGGGGGGTTGAAAAATGGAAGAAAGCTCAGGTCTCCCTGGCAAGG TTCCTATCGAGTGCTTGAGAAGATCTCCCATTTGGGATATGTCCTTCAAG CCGGAAAAAGTGCTGAGGTTGCACGAGTTCATGTCACTCGGTTGCGGAAG TTCGAGGAGCATTTCAAGGAACTCGGTACACGGCAAGGTGGCGTCTTTAC AGACTCTAGAAGTTGTGGACATCATAATGGGTATCCCCACCTACCACACG TAAACCGCTACCCCACTCGTCAACCGTTTGTTCCTCCTCCTCAAGACTAT TCTGCTTTTGACAGCGATCCCCTGAGAGCAGCGCCGCCATTTGTTCGCAA AAATAATCCATCGACGCGTGGAAAAAAGCGCACACAGCAAGGCGACCGTT ATTGGAACAGCACCGACCGTTCCAAGAAACGTCCAAAGCAATCATACGAC GAGTACGTCAAGAAACAAGCTACAAGTGGTCCTGTCATCCTACAATCTTC GCGCTCGCAACCCTTTCCGCCGCGTCCAAAGCCTTCCCCTATTGTTCCCT CCGCGCTTTCCGGTAATCGCTTTGCTTCACACCTTCCTTTGTCTGCCGCA GCCAAAGCCATTTGGAATGCAAGTAGAGTCCAGAACCCCACAGTTGGTCA TCTTCACGACAGAGACTTTCGAATTCGCGACTTACACCATAGTTCCCCGA ACCATATCCATTCCGTTGCTGACCTAGATGATGAATCTCGTTTTGAACCA ATTGTAGGAACCTCACAGAATATCGAAAAGGAGTACTTGCGCCTAACATC CGCACCAAAACCGGAAGAAGTACGTCCGCCAAGTGTCCTCGTCAAAGCTC TCGCCCACATCAAGTCTTCCTGGCATAATTCCCAGCGAGACTACGACTGG GTATGTCGTCAAATTAAGGCAGTTCGTCAAGATTACAGAGTGCAACATAT TTCGACTCCTGAGGTTGTCGACGTCTATCAAACTCATGCACGAATCGCGC TGGCCAATAACGATTTGGGTGAATTCAATACTTGTGTAGCTCAGCTTCAG GAACTCTTTGATAAGATCGAAGTCAACGAACGCATCCAAGACGAGTTCTT TGCGTATAGAATTGTGTACAACATCATTGTCCAGGCTCCGGAATGGGAAC AGGCAAAAATGCTTTCAAAGTTGTCGTCGGTGGAAAGGAGCCGACGTGCG ACTCGTTTTGCTCTTAAGGTTCGAGACCTTGTCATTACAGGTAACTATAA CAAATTCTTCAAGATATGTTCTAATCCTCCAAAGAAGACCATGCTCTCCT ATTTGTTAGTTCATCTATATGATCGAATGCGTTTTCATGCACTTTCGGTT ATGACGACTTCGTATGGCTCCGTCCCGAAGGCTTTCATGTCCGTAGCTTA TATTTTAGATCTGTTGGGATGGACGCATGCATCCAAAATGGATGACAAGC AAGAAACCGTTAATATGGAAGACTTCTTTTCCTCTAGTGACGAACAGATA CTCACACAGCTCAGATCACTGAATTTAATGTCAAGACAACCATGGATGTA CGAGGCACTATCTTTTCTAGTTGCCGCTAACGTAGCCTTTGCCAAACAGG AAAATGGAGATGGGTCGGATTCCTTCCACTCCATAATGGTGGATTTTACC ACTACAAAGTCACAAGGTGTTCGAAGACCGAAAACCGCAACAAAGCTTAT AACTCACGCTGGAACTGATTCTGTTGACCTTCTGAAATGA back to topprotein sequence of Gvermi8218.t1 >Gvermi8218.t1 ID=Gvermi8218.t1|Name=Gvermi8218.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=630bp
LDEPLENRLKATHDGLLSNGLKARGAAEKQHDKTIKEAAYAVSDRVPVYY TPGGLKNGRKLRSPWQGSYRVLEKISHLGYVLQAGKSAEVARVHVTRLRK FEEHFKELGTRQGGVFTDSRSCGHHNGYPHLPHVNRYPTRQPFVPPPQDY SAFDSDPLRAAPPFVRKNNPSTRGKKRTQQGDRYWNSTDRSKKRPKQSYD EYVKKQATSGPVILQSSRSQPFPPRPKPSPIVPSALSGNRFASHLPLSAA AKAIWNASRVQNPTVGHLHDRDFRIRDLHHSSPNHIHSVADLDDESRFEP IVGTSQNIEKEYLRLTSAPKPEEVRPPSVLVKALAHIKSSWHNSQRDYDW VCRQIKAVRQDYRVQHISTPEVVDVYQTHARIALANNDLGEFNTCVAQLQ ELFDKIEVNERIQDEFFAYRIVYNIIVQAPEWEQAKMLSKLSSVERSRRA TRFALKVRDLVITGNYNKFFKICSNPPKKTMLSYLLVHLYDRMRFHALSV MTTSYGSVPKAFMSVAYILDLLGWTHASKMDDKQETVNMEDFFSSSDEQI LTQLRSLNLMSRQPWMYEALSFLVAANVAFAKQENGDGSDSFHSIMVDFT TTKSQGVRRPKTATKLITHAGTDSVDLLK* back to topmRNA from alignment at ScGOVlb_24226:1615305..1619615+ Legend: polypeptidestart_codonCDSexonintronstop_codon Hold the cursor over a type above to highlight its positions in the sequence below. >Gvermi8218.t1 ID=Gvermi8218.t1|Name=Gvermi8218.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=mRNA|length=4311bp|location=Sequence derived from alignment at ScGOVlb_24226:1615305..1619615+ (Gracilaria vermiculophylla HapMaleFtJ_2017 male) TTGGATGAACCTCTTGAGAATCGTCTCAAGGCCACCCATGATGGACTTCT
TTCCAACGGTTTGAAGGCAAGAGGTGCTGCGGAAAAGCAGCATGACAAGA
CTATCAAGGAAGCAGCCTACGCAGTTAGTGACAGGGTTCCTGTCTACTAC
ACGCCGGGGGGGTTGAAAAATGGAAGAAAGCTCAGGTCTCCCTGGCAAGG
TTCCTATCGAGTGCTTGAGAAGATCTCCCATTTGGGATATGTCCTTCAAG
CCGGAAAAAGTGCTGAGGTTGCACGAGTTCATGTCACTCGGTTGCGGAAG
TTCGAGGAGCATTTCAAGGAACTCGGTACACGGCAAGGTGGCGTCTTTAC
AGACTCTAGAAGTTGGTATGTTCTTTAAACCAACGACCGTCTCGTAGACA
AGAAAAGGGAGTTCAAAATGACTTCTGTTGGTCGTCGAGGGTATCAGTGG
TGACGTGAGGAGGATTTGCTGGAAATTATGGTCAAATTTTACGACCTCAC
GAAGGGGAATAGTCGTCACTGGCAATAGCGAAAAGAGCTCTCGGCGCCTA
TGCGGAGCGGAGTGTTACACCGCAAGCGTTTTCATATTTACATATATGTG
CGCTGTGTGCTGGCGAGCGTATGATGGCTGTAGCAAGTGTGTGATGGCAA
AAGCATGTTGCGTATGGCAGCGCGTGGTAGTGTCCTTTTCGTTTTAGTGA
TCGTATCATACTTGGTGGAGTTCTGTGTGGTTGAGGCTCACCGTTGTGTG
TTATGCGGCGTGGTGTGTTGTGGACGCTATGTTCTGTGCATTGCTGTGAT
TTTGTGCGTGAAAGTCTATAAAAGGGGACTCTCTGCCCCCTGGCTAGCTT
CCAGGAGCAAGCATGAAATTGATTGAGTAAAATAACTACCAGGTGCGTCG
CAACAaagatatgtaaacgtttataaaacgttttgggaaagcattttcaa
gccttcttgagtatgcaatgcttaataaaaaagctttgtatgtatttttt
tcatcgagagtcaagtgcatagcatatgtttagctttaataggactttac
tacgttaaaacttcttttgatctttttcacttataataacaatatttgta
acactgtagttcatctaaagcaaagttttactctatttgaaatacatact
ttttgcaactctctttttttcaatgcttatagaactatttgaaatcttgt
tttgtttattttgagttttcgaaaggaaatgttgttaaattttataaagc
aaaaacatttcgaagcgttttttttctatccttataaccttttttgtaaa
atcatccttattttaacgaatgttttagtgcaaaatacattgccatgata
gtattcttgcaaaactttttgcttgttgcagctgagctatatgaagctat
caataaaacgtgtgtttatattacagaaaatatttaagaaaatagtatga
aaatgagaacaacggattagatctatagtgctgtttgaagtatatgtttt
aagctttgaatggagaagatattatggttttttaaggaaaaaacgacgtg
ttttgaaataattacgcaggagttcgaaatgtcctgtgtacttttgaaac
gcgtttgaagggttttaacgaagaggagtggctacagcaggaaaaaatcc
atgttttggcgcgcttttgcaattgcctatacttttgaaacgcgctgtaT
ATCTCTGCTGAGAACTTCTAAAAAGCAGATTTTTCTCCACCAGAAAATGC
GGGGTGCTTAAGTATGTACATTACGGGGATACAGTAAATATTACATTGAG
ATTAAAATTTTAGATTTTCAGTGCAGAACACGTGGCCGTCAATGCAGAAG
GTGCCCACGTTGCCAAGAAGGTTCAGCACGCGTGGACAGATGCTCCCAAC
GATTTGCACTTCATCATCTATTCGTAGAAGCCAAGCCCGCTCAAGCCCCA
GCGACCCGCACAGCGCTGAAACCGAGATCATTTCAGTTGCGCATCTAAAC
TTGCCGAGTTCGCGTTGACGTCTCCCACTTTCGGGACTAATAGTTTTGAC
CATCATATCCGTTTCAGTGCAAGGCATTTCCCCTCACGCCTTCACAGCTT
TTCTTGTTTTCTGGGAAACTGAAACAACGTGCTTGTACCATTCCCGCTCG
AAAGGAGCCCAATCCAGAAAGAGCGAGTGCGTGTTTTGGCGTTATAATGG
TACGTCTACCTGATGCTGACGGAGAATGGGAAACACACACACACACATCC
GGTCGTATTTTTCTTACCAATGTGGATACGAAAGAGACACGGTGGTTGTG
GCAGAAGTGGGATGCGAATGGTCGATTGTTCGTGCGTAATTCGGTCGACC
CAAGTATGCAAATATGGGTAGACCGCATGGACCCCGCCACTCGTCTGCAG
ACTGGAACCGCATCTCGGGAAGAAGTTGCTCAGTACCAAGCTACGGGAAA
TTATCCGCCTTCACACCATGCTGACGGTCAAGTCGTACCCCACTCGCAac
ccccaccaccgccacccccgccgtcacacagatatccacctccacctccg
cctccacctcctcctccaccacctccacctcGCTCCCCTCAGCCTCCATT
TCATTCTCTTTCACCGCCCCTTTCTTCCGCCCCACTTCACCCGCCGGTTT
CGCAAATGTCGTATTCTCCCAAATCTTCACACCCGTACTCTTATTCCCTA
AAGGAATCCGAAAAGTATGGAAGAACCGCGTCCGAAGCTACTCAATACGA
TCCAAACTCTCGATCTAGTTATCAGCAATTTCATAGTGGACATCATAATG
GGTATCCCCACCTACCACACGTAAACCGCTACCCCACTCGTCAACCGTTT
GTTCCTCCTCCTCAAGACTATTCTGCTTTTGACAGCGATCCCCTGAGAGC
AGCGCCGCCATTTGTTCGCAAAAATAATCCATCGACGCGTGGAAAAAAGC
GCACACAGCAAGGCGACCGTTATTGGAACAGCACCGACCGTTCCAAGAAA
CGTCCAAAGCAATCATACGACGAGTACGTCAAGAAACAAGCTACAAGTGG
TCCTGTCATCCTACAATCTTCGCGCTCGCAACCCTTTCCGCCGCGTCCAA
AGCCTTCCCCTATTGTTCCCTCCGCGCTTTCCGGTAATCGCTTTGCTTCA
CACCTTCCTTTGTCTGCCGCAGCCAAAGCCATTTGGAATGCAAGTAGAGT
CCAGAACCCCACAGTTGGTCATCTTCACGACAGAGACTTTCGAATTCGCG
ACTTACACCATAGTTCCCCGAACCATATCCATTCCGTTGCTGACCTAGAT
GATGAATCTCGTTTTGAACCAATTGTAGGAACCTCACAGAATATCGAAAA
GGAGTACTTGCGCCTAACATCCGCACCAAAACCGGAAGAAGTACGTCCGC
CAAGTGTCCTCGTCAAAGCTCTCGCCCACATCAAGTCTTCCTGGCATAAT
TCCCAGCGAGACTACGACTGGGTATGTCGTCAAATTAAGGCAGTTCGTCA
AGATTACAGAGTGCAACATATTTCGACTCCTGAGGTTGTCGACGTCTATC
AAACTCATGCACGAATCGCGCTGGCCAATAACGATTTGGGTGAATTCAAT
ACTTGTGTAGCTCAGCTTCAGGAACTCTTTGATAAGATCGAAGTCAACGA
ACGCATCCAAGACGAGTTCTTTGCGTATAGAATTGTGTACAACATCATTG
TCCAGGCTCCGGAATGGGAACAGGCAAAAATGCTTTCAAAGTTGTCGTCG
GTGGAAAGGAGCCGACGTGCGACTCGTTTTGCTCTTAAGGTTCGAGACCT
TGTCATTACAGGTAACTATAACAAATTCTTCAAGATATGTTCTAATCCTC
CAAAGAAGACCATGCTCTCCTATTTGTTAGTTCATCTATATGATCGAATG
CGTTTTCATGCACTTTCGGTTATGACGACTTCGTATGGCTCCGTCCCGAA
GGCTTTCATGTCCGTAGCTTATATTTTAGATCTGTTGGGATGGACGCATG
CATCCAAAATGGATGACAAGCAAGAAACCGTTAATATGGAAGACTTCTTT
TCCTCTAGTGACGAACAGATACTCACACAGCTCAGATCACTGAATTTAAT
GTCAAGACAACCATGGATGTACGAGGCACTATCTTTTCTAGTTGCCGCTA
ACGTAGCCTTTGCCAAACAGGAAAATGGAGATGGGTCGGATTCCTTCCAC
TCCATAATGGTGGATTTTACCACTACAAAGTCACAAGGTGTTCGAAGACC
GAAAACCGCAACAAAGCTTATAACTCACGCTGGAACTGATTCTGTTGACC
TTCTGAAATGA back to topCoding sequence (CDS) from alignment at ScGOVlb_24226:1615305..1619615+ >Gvermi8218.t1 ID=Gvermi8218.t1|Name=Gvermi8218.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=CDS|length=1890bp|location=Sequence derived from alignment at ScGOVlb_24226:1615305..1619615+ (Gracilaria vermiculophylla HapMaleFtJ_2017 male) TTGGATGAACCTCTTGAGAATCGTCTCAAGGCCACCCATGATGGACTTCT TTCCAACGGTTTGAAGGCAAGAGGTGCTGCGGAAAAGCAGCATGACAAGA CTATCAAGGAAGCAGCCTACGCAGTTAGTGACAGGGTTCCTGTCTACTAC ACGCCGGGGGGGTTGAAAAATGGAAGAAAGCTCAGGTCTCCCTGGCAAGG TTCCTATCGAGTGCTTGAGAAGATCTCCCATTTGGGATATGTCCTTCAAG CCGGAAAAAGTGCTGAGGTTGCACGAGTTCATGTCACTCGGTTGCGGAAG TTCGAGGAGCATTTCAAGGAACTCGGTACACGGCAAGGTGGCGTCTTTAC AGACTCTAGAAGTTGTGGACATCATAATGGGTATCCCCACCTACCACACG TAAACCGCTACCCCACTCGTCAACCGTTTGTTCCTCCTCCTCAAGACTAT TCTGCTTTTGACAGCGATCCCCTGAGAGCAGCGCCGCCATTTGTTCGCAA AAATAATCCATCGACGCGTGGAAAAAAGCGCACACAGCAAGGCGACCGTT ATTGGAACAGCACCGACCGTTCCAAGAAACGTCCAAAGCAATCATACGAC GAGTACGTCAAGAAACAAGCTACAAGTGGTCCTGTCATCCTACAATCTTC GCGCTCGCAACCCTTTCCGCCGCGTCCAAAGCCTTCCCCTATTGTTCCCT CCGCGCTTTCCGGTAATCGCTTTGCTTCACACCTTCCTTTGTCTGCCGCA GCCAAAGCCATTTGGAATGCAAGTAGAGTCCAGAACCCCACAGTTGGTCA TCTTCACGACAGAGACTTTCGAATTCGCGACTTACACCATAGTTCCCCGA ACCATATCCATTCCGTTGCTGACCTAGATGATGAATCTCGTTTTGAACCA ATTGTAGGAACCTCACAGAATATCGAAAAGGAGTACTTGCGCCTAACATC CGCACCAAAACCGGAAGAAGTACGTCCGCCAAGTGTCCTCGTCAAAGCTC TCGCCCACATCAAGTCTTCCTGGCATAATTCCCAGCGAGACTACGACTGG GTATGTCGTCAAATTAAGGCAGTTCGTCAAGATTACAGAGTGCAACATAT TTCGACTCCTGAGGTTGTCGACGTCTATCAAACTCATGCACGAATCGCGC TGGCCAATAACGATTTGGGTGAATTCAATACTTGTGTAGCTCAGCTTCAG GAACTCTTTGATAAGATCGAAGTCAACGAACGCATCCAAGACGAGTTCTT TGCGTATAGAATTGTGTACAACATCATTGTCCAGGCTCCGGAATGGGAAC AGGCAAAAATGCTTTCAAAGTTGTCGTCGGTGGAAAGGAGCCGACGTGCG ACTCGTTTTGCTCTTAAGGTTCGAGACCTTGTCATTACAGGTAACTATAA CAAATTCTTCAAGATATGTTCTAATCCTCCAAAGAAGACCATGCTCTCCT ATTTGTTAGTTCATCTATATGATCGAATGCGTTTTCATGCACTTTCGGTT ATGACGACTTCGTATGGCTCCGTCCCGAAGGCTTTCATGTCCGTAGCTTA TATTTTAGATCTGTTGGGATGGACGCATGCATCCAAAATGGATGACAAGC AAGAAACCGTTAATATGGAAGACTTCTTTTCCTCTAGTGACGAACAGATA CTCACACAGCTCAGATCACTGAATTTAATGTCAAGACAACCATGGATGTA CGAGGCACTATCTTTTCTAGTTGCCGCTAACGTAGCCTTTGCCAAACAGG AAAATGGAGATGGGTCGGATTCCTTCCACTCCATAATGGTGGATTTTACC ACTACAAAGTCACAAGGTGTTCGAAGACCGAAAACCGCAACAAAGCTTAT AACTCACGCTGGAACTGATTCTGTTGACCTTCTGAAATGA back to top
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