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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Seed ortholog | 80637.XP_007770196.1 |
| Max annot lvl | 4751|Fungi |
| Evalue | 1.39e-20 |
| EggNOG OGs | 2F7A6@1|root,2T8DC@2759|Eukaryota,3AHF5@33154|Opisthokonta,3PA5N@4751|Fungi |
Relationships
This mRNA is a part of the following gene feature(s):
The following stop_codon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following start_codon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Gvermi7701.t1 ID=Gvermi7701.t1|Name=Gvermi7701.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=mRNA|length=851bp MDTPVASAPAAPPVRQRSPPAPASPSTPESPNSPASIGNYDAAAAAAAAH HLVLVGGGPRSVIQVNAEVLFMILFRDHFSELAALGAQYRLSTTILEKQP AIALGSPYGAGQTGMMNTGLEDDVRFPLPLPPHAAALSVLNHFLSYKQRY ENYVGRDVHAYHREVKKYNLPGAVMFKKSVGPESFSADGALDHTIAYLLR RTTGAEEAATFAIVRSLADRLLPFYTLTVRPSCEVSHVKLSPATKPLVLA RAAADAAAPLALEADLVRLNTGTILQNPVADVRVHARMFCQPMNVEHFRE HCQRRALLGADGLLRPGLAVISGGMGLSGLDQLAVLDGVMHLFEEDDASL LGYRVTEDAKRRYQGAITLISRTAGRSVLPRQGFTPEWRQRVPGVATTEH LHALALHGHGEELFRVWYDIMTASVARTMGKTPEAVRQGKLSTEASLKLQ FEETLKFLHFRRLAGDQEKEGNMAKKEELLNESMRTIYGAWRQAASAFLF GYGFENNINAATTRMEKLAPITWKGRQSWMYARMMVNAITDPEFALKQSN IEVYHIWKDIYRYLASSPVEIHSMLHLLLDAGIAQYQHAEYNKVTFDEAT GKIDLFGKLHDLFIVSPTYETSEDIVCSKVSQQLKPYVAEHPSYGSIGKF RRFQDKLGRPVPIESNGVAGLGFDVHDHGFHSKVGTFGIDLNDRSSGAGV ASSFTLRRMAVAHMRAAGIESAEEKIDELYELGKPSIEAYENEVKTFERF FVEACEIRAYLKAIEAIAGDDALAFCEMYDKGLTEDGRKEQMQKYGSETY EQEVANMPQFKAPSRDAYLARSVDTTDEEDVWLYTEAFKLAKKHLKMTSN * back to topspliced messenger RNA >Gvermi7701.t1 ID=Gvermi7701.t1|Name=Gvermi7701.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=mRNA|length=2553bp|location=Sequence derived from alignment at ScGOVlb_64:2802726..2805278- (Gracilaria vermiculophylla HapMaleFtJ_2017 male)|Notes=Excludes all bases but those of type(s): exon.
ATGGACACCCCTGTCGCATCCGCCCCCGCCGCGCCGCCGGTCCGCCAGCG CTCCCCGCCGGCGCCCGCGTCCCCCAGCACGCCTGAGTCCCCCAATTCCC CCGCGTCCATCGGCAACTATGACGCCGCCGCCGCCGCCGCCGCAGCTCAC CATCTCGTGCTCGTCGGCGGCGGCCCGCGCTCCGTCATCCAGGTCAACGC CGAGGTCCTCTTCATGATCCTCTTCCGCGACCACTTCAGCGAGCTCGCCG CCCTGGGCGCCCAATACCGCCTCTCAACCACCATCCTCGAGAAGCAGCCT GCCATCGCCCTCGGCTCCCCGTACGGTGCCGGCCAGACCGGCATGATGAA CACCGGCCTCGAGGACGACGTCCGCTTCCCGCTCCCGCTCCCGCCCCACG CCGCCGCCCTCTCCGTCCTCAACCACTTTCTCAGCTACAAGCAGCGCTAC GAAAACTACGTCGGCCGCGACGTCCACGCCTACCACCGCGAGGTGAAAAA ATACAACCTCCCGGGCGCCGTCATGTTCAAAAAGTCCGTCGGCCCCGAGT CCTTCTCCGCCGACGGCGCCCTGGACCACACCATCGCCTACCTGCTGCGC CGCACCACCGGCGCCGAGGAGGCCGCCACGTTCGCAATCGTGCGCAGCCT GGCCGACCGCCTGCTCCCTTTCTACACCCTCACCGTGCGCCCGTCGTGCG AGGTGAGCCACGTCAAGCTGTCGCCCGCCACCAAGCCGCTCGTGCTGGCG CGCGCCGCCGCCGACGCCGCCGCGCCGCTCGCGCTCGAGGCCGACCTCGT GCGCCTCAACACCGGCACCATCCTGCAGAACCCCGTGGCCGACGTGCGCG TGCACGCGCGCATGTTCTGCCAGCCCATGAACGTCGAACACTTCCGCGAG CACTGCCAGCGGCGCGCGCTGCTGGGCGCGGACGGGCTGCTGCGCCCGGG GCTGGCCGTCATCAGCGGCGGCATGGGGCTGTCCGGACTGGACCAGCTCG CCGTGCTGGACGGCGTCATGCACCTGTTTGAGGAGGACGACGCCAGCCTG CTGGGCTACAGGGTCACCGAGGACGCCAAGCGGCGCTACCAGGGTGCCAT CACGCTCATTAGCAGGACCGCCGGCAGGAGCGTGCTGCCGCGCCAGGGCT TCACGCCCGAGTGGCGCCAGCGCGTGCCCGGCGTCGCCACCACCGAGCAT CTGCACGCGCTTGCGCTGCACGGCCACGGCGAGGAGCTCTTCCGCGTCTG GTACGACATCATGACTGCCTCCGTCGCCAGGACGATGGGCAAGACCCCGG AGGCGGTGCGCCAGGGCAAGCTTTCCACCGAGGCGTCGCTGAAGTTGCAG TTTGAAGAGACTTTGAAGTTCTTGCACTTCAGGAGACTGGCTGGAGATCA GGAAAAGGAAGGAAACATGGCCAAAAAGGAAGAGCTTCTCAATGAGTCCA TGAGAACCATCTACGGCGCCTGGCGACAGGCCGCCTCTGCTTTCCTCTTC GGGTATGGATTTGAGAACAACATCAACGCTGCAACGACCCGAATGGAGAA GCTGGCTCCAATTACGTGGAAGGGAAGACAGTCGTGGATGTATGCCAGAA TGATGGTGAATGCCATCACCGATCCCGAGTTTGCGCTCAAGCAGTCAAAC ATCGAGGTCTACCATATCTGGAAGGACATATACCGTTACCTTGCCTCTTC GCCCGTCGAGATTCACAGCATGTTGCACTTGCTTCTCGACGCTGGCATTG CACAGTATCAACATGCAGAGTACAATAAGGTCACTTTTGACGAAGCTACC GGAAAGATCGATCTTTTCGGAAAGCTCCACGACTTGTTCATTGTCTCTCC CACTTACGAGACCAGCGAGGACATTGTATGCTCCAAGGTGTCGCAGCAGT TGAAGCCGTACGTCGCAGAGCACCCGTCTTATGGCAGCATTGGCAAGTTC AGGAGATTCCAGGACAAGCTGGGGCGCCCGGTTCCCATCGAGAGCAACGG AGTGGCTGGGCTTGGTTTCGACGTGCACGATCACGGCTTTCATTCAAAAG TGGGCACCTTTGGCATTGACCTGAATGATAGGTCCTCCGGCGCTGGGGTA GCCTCATCGTTCACACTACGACGTATGGCCGTGGCGCACATGCGCGCGGC AGGCATCGAGAGTGCCGAAGAAAAGATTGATGAGCTTTACGAACTTGGCA AGCCGAGCATCGAGGCCTATGAGAACGAGGTGAAGACGTTTGAGCGCTTC TTCGTGGAGGCATGCGAGATTCGGGCATATCTCAAGGCCATTGAAGCTAT TGCCGGCGATGACGCGCTTGCTTTCTGTGAAATGTACGACAAGGGCCTCA CGGAGGATGGCAGAAAGGAGCAAATGCAAAAGTACGGCAGTGAAACATAC GAACAAGAAGTGGCGAACATGCCGCAGTTCAAGGCGCCTTCGAGAGACGC CTACCTCGCGCGCTCGGTAGACACCACCGATGAGGAAGATGTCTGGCTGT ACACAGAGGCATTTAAGCTGGCGAAAAAGCACTTGAAAATGACAAGCAAT TAG back to topprotein sequence of Gvermi7701.t1 >Gvermi7701.t1 ID=Gvermi7701.t1|Name=Gvermi7701.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=851bp
MDTPVASAPAAPPVRQRSPPAPASPSTPESPNSPASIGNYDAAAAAAAAH HLVLVGGGPRSVIQVNAEVLFMILFRDHFSELAALGAQYRLSTTILEKQP AIALGSPYGAGQTGMMNTGLEDDVRFPLPLPPHAAALSVLNHFLSYKQRY ENYVGRDVHAYHREVKKYNLPGAVMFKKSVGPESFSADGALDHTIAYLLR RTTGAEEAATFAIVRSLADRLLPFYTLTVRPSCEVSHVKLSPATKPLVLA RAAADAAAPLALEADLVRLNTGTILQNPVADVRVHARMFCQPMNVEHFRE HCQRRALLGADGLLRPGLAVISGGMGLSGLDQLAVLDGVMHLFEEDDASL LGYRVTEDAKRRYQGAITLISRTAGRSVLPRQGFTPEWRQRVPGVATTEH LHALALHGHGEELFRVWYDIMTASVARTMGKTPEAVRQGKLSTEASLKLQ FEETLKFLHFRRLAGDQEKEGNMAKKEELLNESMRTIYGAWRQAASAFLF GYGFENNINAATTRMEKLAPITWKGRQSWMYARMMVNAITDPEFALKQSN IEVYHIWKDIYRYLASSPVEIHSMLHLLLDAGIAQYQHAEYNKVTFDEAT GKIDLFGKLHDLFIVSPTYETSEDIVCSKVSQQLKPYVAEHPSYGSIGKF RRFQDKLGRPVPIESNGVAGLGFDVHDHGFHSKVGTFGIDLNDRSSGAGV ASSFTLRRMAVAHMRAAGIESAEEKIDELYELGKPSIEAYENEVKTFERF FVEACEIRAYLKAIEAIAGDDALAFCEMYDKGLTEDGRKEQMQKYGSETY EQEVANMPQFKAPSRDAYLARSVDTTDEEDVWLYTEAFKLAKKHLKMTSN * back to topmRNA from alignment at ScGOVlb_64:2802726..2805278- Legend: polypeptideCDSexonstart_codonstop_codon Hold the cursor over a type above to highlight its positions in the sequence below. >Gvermi7701.t1 ID=Gvermi7701.t1|Name=Gvermi7701.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=mRNA|length=2553bp|location=Sequence derived from alignment at ScGOVlb_64:2802726..2805278- (Gracilaria vermiculophylla HapMaleFtJ_2017 male) ATGGACACCCCTGTCGCATCCGCCCCCGCCGCGCCGCCGGTCCGCCAGCG
CTCCCCGCCGGCGCCCGCGTCCCCCAGCACGCCTGAGTCCCCCAATTCCC
CCGCGTCCATCGGCAACTATGACGCCGCCGCCGCCGCCGCCGCAGCTCAC
CATCTCGTGCTCGTCGGCGGCGGCCCGCGCTCCGTCATCCAGGTCAACGC
CGAGGTCCTCTTCATGATCCTCTTCCGCGACCACTTCAGCGAGCTCGCCG
CCCTGGGCGCCCAATACCGCCTCTCAACCACCATCCTCGAGAAGCAGCCT
GCCATCGCCCTCGGCTCCCCGTACGGTGCCGGCCAGACCGGCATGATGAA
CACCGGCCTCGAGGACGACGTCCGCTTCCCGCTCCCGCTCCCGCCCCACG
CCGCCGCCCTCTCCGTCCTCAACCACTTTCTCAGCTACAAGCAGCGCTAC
GAAAACTACGTCGGCCGCGACGTCCACGCCTACCACCGCGAGGTGAAAAA
ATACAACCTCCCGGGCGCCGTCATGTTCAAAAAGTCCGTCGGCCCCGAGT
CCTTCTCCGCCGACGGCGCCCTGGACCACACCATCGCCTACCTGCTGCGC
CGCACCACCGGCGCCGAGGAGGCCGCCACGTTCGCAATCGTGCGCAGCCT
GGCCGACCGCCTGCTCCCTTTCTACACCCTCACCGTGCGCCCGTCGTGCG
AGGTGAGCCACGTCAAGCTGTCGCCCGCCACCAAGCCGCTCGTGCTGGCG
CGCGCCGCCGCCGACGCCGCCGCGCCGCTCGCGCTCGAGGCCGACCTCGT
GCGCCTCAACACCGGCACCATCCTGCAGAACCCCGTGGCCGACGTGCGCG
TGCACGCGCGCATGTTCTGCCAGCCCATGAACGTCGAACACTTCCGCGAG
CACTGCCAGCGGCGCGCGCTGCTGGGCGCGGACGGGCTGCTGCGCCCGGG
GCTGGCCGTCATCAGCGGCGGCATGGGGCTGTCCGGACTGGACCAGCTCG
CCGTGCTGGACGGCGTCATGCACCTGTTTGAGGAGGACGACGCCAGCCTG
CTGGGCTACAGGGTCACCGAGGACGCCAAGCGGCGCTACCAGGGTGCCAT
CACGCTCATTAGCAGGACCGCCGGCAGGAGCGTGCTGCCGCGCCAGGGCT
TCACGCCCGAGTGGCGCCAGCGCGTGCCCGGCGTCGCCACCACCGAGCAT
CTGCACGCGCTTGCGCTGCACGGCCACGGCGAGGAGCTCTTCCGCGTCTG
GTACGACATCATGACTGCCTCCGTCGCCAGGACGATGGGCAAGACCCCGG
AGGCGGTGCGCCAGGGCAAGCTTTCCACCGAGGCGTCGCTGAAGTTGCAG
TTTGAAGAGACTTTGAAGTTCTTGCACTTCAGGAGACTGGCTGGAGATCA
GGAAAAGGAAGGAAACATGGCCAAAAAGGAAGAGCTTCTCAATGAGTCCA
TGAGAACCATCTACGGCGCCTGGCGACAGGCCGCCTCTGCTTTCCTCTTC
GGGTATGGATTTGAGAACAACATCAACGCTGCAACGACCCGAATGGAGAA
GCTGGCTCCAATTACGTGGAAGGGAAGACAGTCGTGGATGTATGCCAGAA
TGATGGTGAATGCCATCACCGATCCCGAGTTTGCGCTCAAGCAGTCAAAC
ATCGAGGTCTACCATATCTGGAAGGACATATACCGTTACCTTGCCTCTTC
GCCCGTCGAGATTCACAGCATGTTGCACTTGCTTCTCGACGCTGGCATTG
CACAGTATCAACATGCAGAGTACAATAAGGTCACTTTTGACGAAGCTACC
GGAAAGATCGATCTTTTCGGAAAGCTCCACGACTTGTTCATTGTCTCTCC
CACTTACGAGACCAGCGAGGACATTGTATGCTCCAAGGTGTCGCAGCAGT
TGAAGCCGTACGTCGCAGAGCACCCGTCTTATGGCAGCATTGGCAAGTTC
AGGAGATTCCAGGACAAGCTGGGGCGCCCGGTTCCCATCGAGAGCAACGG
AGTGGCTGGGCTTGGTTTCGACGTGCACGATCACGGCTTTCATTCAAAAG
TGGGCACCTTTGGCATTGACCTGAATGATAGGTCCTCCGGCGCTGGGGTA
GCCTCATCGTTCACACTACGACGTATGGCCGTGGCGCACATGCGCGCGGC
AGGCATCGAGAGTGCCGAAGAAAAGATTGATGAGCTTTACGAACTTGGCA
AGCCGAGCATCGAGGCCTATGAGAACGAGGTGAAGACGTTTGAGCGCTTC
TTCGTGGAGGCATGCGAGATTCGGGCATATCTCAAGGCCATTGAAGCTAT
TGCCGGCGATGACGCGCTTGCTTTCTGTGAAATGTACGACAAGGGCCTCA
CGGAGGATGGCAGAAAGGAGCAAATGCAAAAGTACGGCAGTGAAACATAC
GAACAAGAAGTGGCGAACATGCCGCAGTTCAAGGCGCCTTCGAGAGACGC
CTACCTCGCGCGCTCGGTAGACACCACCGATGAGGAAGATGTCTGGCTGT
ACACAGAGGCATTTAAGCTGGCGAAAAAGCACTTGAAAATGACAAGCAAT
TAG back to topCoding sequence (CDS) from alignment at ScGOVlb_64:2802726..2805278- >Gvermi7701.t1 ID=Gvermi7701.t1|Name=Gvermi7701.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=CDS|length=2553bp|location=Sequence derived from alignment at ScGOVlb_64:2802726..2805278- (Gracilaria vermiculophylla HapMaleFtJ_2017 male) ATGGACACCCCTGTCGCATCCGCCCCCGCCGCGCCGCCGGTCCGCCAGCG CTCCCCGCCGGCGCCCGCGTCCCCCAGCACGCCTGAGTCCCCCAATTCCC CCGCGTCCATCGGCAACTATGACGCCGCCGCCGCCGCCGCCGCAGCTCAC CATCTCGTGCTCGTCGGCGGCGGCCCGCGCTCCGTCATCCAGGTCAACGC CGAGGTCCTCTTCATGATCCTCTTCCGCGACCACTTCAGCGAGCTCGCCG CCCTGGGCGCCCAATACCGCCTCTCAACCACCATCCTCGAGAAGCAGCCT GCCATCGCCCTCGGCTCCCCGTACGGTGCCGGCCAGACCGGCATGATGAA CACCGGCCTCGAGGACGACGTCCGCTTCCCGCTCCCGCTCCCGCCCCACG CCGCCGCCCTCTCCGTCCTCAACCACTTTCTCAGCTACAAGCAGCGCTAC GAAAACTACGTCGGCCGCGACGTCCACGCCTACCACCGCGAGGTGAAAAA ATACAACCTCCCGGGCGCCGTCATGTTCAAAAAGTCCGTCGGCCCCGAGT CCTTCTCCGCCGACGGCGCCCTGGACCACACCATCGCCTACCTGCTGCGC CGCACCACCGGCGCCGAGGAGGCCGCCACGTTCGCAATCGTGCGCAGCCT GGCCGACCGCCTGCTCCCTTTCTACACCCTCACCGTGCGCCCGTCGTGCG AGGTGAGCCACGTCAAGCTGTCGCCCGCCACCAAGCCGCTCGTGCTGGCG CGCGCCGCCGCCGACGCCGCCGCGCCGCTCGCGCTCGAGGCCGACCTCGT GCGCCTCAACACCGGCACCATCCTGCAGAACCCCGTGGCCGACGTGCGCG TGCACGCGCGCATGTTCTGCCAGCCCATGAACGTCGAACACTTCCGCGAG CACTGCCAGCGGCGCGCGCTGCTGGGCGCGGACGGGCTGCTGCGCCCGGG GCTGGCCGTCATCAGCGGCGGCATGGGGCTGTCCGGACTGGACCAGCTCG CCGTGCTGGACGGCGTCATGCACCTGTTTGAGGAGGACGACGCCAGCCTG CTGGGCTACAGGGTCACCGAGGACGCCAAGCGGCGCTACCAGGGTGCCAT CACGCTCATTAGCAGGACCGCCGGCAGGAGCGTGCTGCCGCGCCAGGGCT TCACGCCCGAGTGGCGCCAGCGCGTGCCCGGCGTCGCCACCACCGAGCAT CTGCACGCGCTTGCGCTGCACGGCCACGGCGAGGAGCTCTTCCGCGTCTG GTACGACATCATGACTGCCTCCGTCGCCAGGACGATGGGCAAGACCCCGG AGGCGGTGCGCCAGGGCAAGCTTTCCACCGAGGCGTCGCTGAAGTTGCAG TTTGAAGAGACTTTGAAGTTCTTGCACTTCAGGAGACTGGCTGGAGATCA GGAAAAGGAAGGAAACATGGCCAAAAAGGAAGAGCTTCTCAATGAGTCCA TGAGAACCATCTACGGCGCCTGGCGACAGGCCGCCTCTGCTTTCCTCTTC GGGTATGGATTTGAGAACAACATCAACGCTGCAACGACCCGAATGGAGAA GCTGGCTCCAATTACGTGGAAGGGAAGACAGTCGTGGATGTATGCCAGAA TGATGGTGAATGCCATCACCGATCCCGAGTTTGCGCTCAAGCAGTCAAAC ATCGAGGTCTACCATATCTGGAAGGACATATACCGTTACCTTGCCTCTTC GCCCGTCGAGATTCACAGCATGTTGCACTTGCTTCTCGACGCTGGCATTG CACAGTATCAACATGCAGAGTACAATAAGGTCACTTTTGACGAAGCTACC GGAAAGATCGATCTTTTCGGAAAGCTCCACGACTTGTTCATTGTCTCTCC CACTTACGAGACCAGCGAGGACATTGTATGCTCCAAGGTGTCGCAGCAGT TGAAGCCGTACGTCGCAGAGCACCCGTCTTATGGCAGCATTGGCAAGTTC AGGAGATTCCAGGACAAGCTGGGGCGCCCGGTTCCCATCGAGAGCAACGG AGTGGCTGGGCTTGGTTTCGACGTGCACGATCACGGCTTTCATTCAAAAG TGGGCACCTTTGGCATTGACCTGAATGATAGGTCCTCCGGCGCTGGGGTA GCCTCATCGTTCACACTACGACGTATGGCCGTGGCGCACATGCGCGCGGC AGGCATCGAGAGTGCCGAAGAAAAGATTGATGAGCTTTACGAACTTGGCA AGCCGAGCATCGAGGCCTATGAGAACGAGGTGAAGACGTTTGAGCGCTTC TTCGTGGAGGCATGCGAGATTCGGGCATATCTCAAGGCCATTGAAGCTAT TGCCGGCGATGACGCGCTTGCTTTCTGTGAAATGTACGACAAGGGCCTCA CGGAGGATGGCAGAAAGGAGCAAATGCAAAAGTACGGCAGTGAAACATAC GAACAAGAAGTGGCGAACATGCCGCAGTTCAAGGCGCCTTCGAGAGACGC CTACCTCGCGCGCTCGGTAGACACCACCGATGAGGAAGATGTCTGGCTGT ACACAGAGGCATTTAAGCTGGCGAAAAAGCACTTGAAAATGACAAGCAAT TAG back to top
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