Gvermi7229.t1 (mRNA) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGvermi7229.t1
Unique NameGvermi7229.t1
TypemRNA
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length251
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_6702contigScGOVlb_6702:2..752 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi7229Gvermi7229Gracilaria vermiculophylla HapMaleFtJ_2017 malegeneScGOVlb_6702 2..752 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gvermi7229.t1.CDS1Gvermi7229.t1.CDS1Gracilaria vermiculophylla HapMaleFtJ_2017 maleCDSScGOVlb_6702 2..752 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gvermi7229.t1.exon1Gvermi7229.t1.exon1Gracilaria vermiculophylla HapMaleFtJ_2017 maleexonScGOVlb_6702 2..752 +


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gvermi7229.t1.stop1Gvermi7229.t1.stop1Gracilaria vermiculophylla HapMaleFtJ_2017 malestop_codonScGOVlb_6702 750..752 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gvermi7229.t1Gvermi7229.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malepolypeptideScGOVlb_6702 2..752 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Gvermi7229.t1 ID=Gvermi7229.t1|Name=Gvermi7229.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=mRNA|length=251bp
XWEVEAEVQMKGDFGAAVASLRDKSELPVSREDRKVVEELDRKHVFARRR
FNVLNIDNHFPQSVDRRFLLHNFLPPTVENKGRLLGGIYEQWRASLQTCL
VPTRAAVNRGFNFDVRNPSTAMRFINATSDESMQKLAGDNVNRFLKLRDS
LVFSGRHCVFDNGGSGGGRRKNKKGLFFTNPYFTRLEDGDGAFKLRQYIS
PKLGDVELRRGLLLPKGPWSEAMAYVPEGTNRVDGRRLENIENAVRSSVN
*
back to top

spliced messenger RNA

>Gvermi7229.t1 ID=Gvermi7229.t1|Name=Gvermi7229.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=mRNA|length=751bp|location=Sequence derived from alignment at ScGOVlb_6702:2..752+ (Gracilaria vermiculophylla HapMaleFtJ_2017 male)|Notes=Excludes all bases but those of type(s): exon.  
GTGGGAGGTGGAAGCGGAGGTGCAGATGAAGGGCGACTTTGGGGCAGCAG
TGGCTTCGCTGCGGGACAAGTCCGAGCTTCCCGTCAGCCGCGAGGACCGG
AAAGTGGTGGAGGAGCTCGACCGGAAGCATGTATTTGCTCGGCGACGCTT
TAATGTGTTAAACATTGACAACCACTTTCCGCAGTCCGTGGACCGCCGGT
TCCTGCTGCACAACTTCTTGCCGCCCACCGTGGAAAACAAGGGTCGGCTG
TTGGGTGGGATCTACGAGCAGTGGCGAGCGTCGCTACAAACGTGCCTCGT
GCCGACGCGGGCAGCGGTGAATCGCGGCTTCAATTTCGATGTACGAAACC
CGTCGACAGCTATGCGATTCATCAACGCAACATCGGATGAATCGATGCAA
AAGCTGGCGGGGGACAACGTGAATCGATTTTTGAAGCTGCGCGATTCACT
GGTGTTCAGCGGTCGGCACTGCGTGTTTGACAACGGTGGAAGCGGTGGTG
GCAGAAGGAAGAACAAAAAGGGCTTGTTCTTCACCAACCCGTATTTCACG
CGGCTTGAGGACGGAGACGGGGCGTTCAAGTTGAGGCAGTACATCAGCCC
CAAACTGGGGGATGTTGAGCTGAGACGCGGACTGCTGTTGCCAAAGGGTC
CTTGGTCAGAAGCGATGGCGTACGTGCCAGAGGGGACGAACCGGGTTGAC
GGGAGAAGGCTGGAAAACATAGAGAACGCGGTGCGGAGCTCTGTGAATTG
A
back to top

protein sequence of Gvermi7229.t1

>Gvermi7229.t1 ID=Gvermi7229.t1|Name=Gvermi7229.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=251bp
XWEVEAEVQMKGDFGAAVASLRDKSELPVSREDRKVVEELDRKHVFARRR
FNVLNIDNHFPQSVDRRFLLHNFLPPTVENKGRLLGGIYEQWRASLQTCL
VPTRAAVNRGFNFDVRNPSTAMRFINATSDESMQKLAGDNVNRFLKLRDS
LVFSGRHCVFDNGGSGGGRRKNKKGLFFTNPYFTRLEDGDGAFKLRQYIS
PKLGDVELRRGLLLPKGPWSEAMAYVPEGTNRVDGRRLENIENAVRSSVN
*
back to top

mRNA from alignment at ScGOVlb_6702:2..752+

Legend: CDSpolypeptideexonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Gvermi7229.t1 ID=Gvermi7229.t1|Name=Gvermi7229.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=mRNA|length=751bp|location=Sequence derived from alignment at ScGOVlb_6702:2..752+ (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
GTGGGAGGTGGAAGCGGAGGTGCAGATGAAGGGCGACTTTGGGGCAGCAG
TGGCTTCGCTGCGGGACAAGTCCGAGCTTCCCGTCAGCCGCGAGGACCGG
AAAGTGGTGGAGGAGCTCGACCGGAAGCATGTATTTGCTCGGCGACGCTT
TAATGTGTTAAACATTGACAACCACTTTCCGCAGTCCGTGGACCGCCGGT
TCCTGCTGCACAACTTCTTGCCGCCCACCGTGGAAAACAAGGGTCGGCTG
TTGGGTGGGATCTACGAGCAGTGGCGAGCGTCGCTACAAACGTGCCTCGT
GCCGACGCGGGCAGCGGTGAATCGCGGCTTCAATTTCGATGTACGAAACC
CGTCGACAGCTATGCGATTCATCAACGCAACATCGGATGAATCGATGCAA
AAGCTGGCGGGGGACAACGTGAATCGATTTTTGAAGCTGCGCGATTCACT
GGTGTTCAGCGGTCGGCACTGCGTGTTTGACAACGGTGGAAGCGGTGGTG
GCAGAAGGAAGAACAAAAAGGGCTTGTTCTTCACCAACCCGTATTTCACG
CGGCTTGAGGACGGAGACGGGGCGTTCAAGTTGAGGCAGTACATCAGCCC
CAAACTGGGGGATGTTGAGCTGAGACGCGGACTGCTGTTGCCAAAGGGTC
CTTGGTCAGAAGCGATGGCGTACGTGCCAGAGGGGACGAACCGGGTTGAC
GGGAGAAGGCTGGAAAACATAGAGAACGCGGTGCGGAGCTCTGTGAATTG
A
back to top

Coding sequence (CDS) from alignment at ScGOVlb_6702:2..752+

>Gvermi7229.t1 ID=Gvermi7229.t1|Name=Gvermi7229.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=CDS|length=751bp|location=Sequence derived from alignment at ScGOVlb_6702:2..752+ (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
GTGGGAGGTGGAAGCGGAGGTGCAGATGAAGGGCGACTTTGGGGCAGCAG
TGGCTTCGCTGCGGGACAAGTCCGAGCTTCCCGTCAGCCGCGAGGACCGG
AAAGTGGTGGAGGAGCTCGACCGGAAGCATGTATTTGCTCGGCGACGCTT
TAATGTGTTAAACATTGACAACCACTTTCCGCAGTCCGTGGACCGCCGGT
TCCTGCTGCACAACTTCTTGCCGCCCACCGTGGAAAACAAGGGTCGGCTG
TTGGGTGGGATCTACGAGCAGTGGCGAGCGTCGCTACAAACGTGCCTCGT
GCCGACGCGGGCAGCGGTGAATCGCGGCTTCAATTTCGATGTACGAAACC
CGTCGACAGCTATGCGATTCATCAACGCAACATCGGATGAATCGATGCAA
AAGCTGGCGGGGGACAACGTGAATCGATTTTTGAAGCTGCGCGATTCACT
GGTGTTCAGCGGTCGGCACTGCGTGTTTGACAACGGTGGAAGCGGTGGTG
GCAGAAGGAAGAACAAAAAGGGCTTGTTCTTCACCAACCCGTATTTCACG
CGGCTTGAGGACGGAGACGGGGCGTTCAAGTTGAGGCAGTACATCAGCCC
CAAACTGGGGGATGTTGAGCTGAGACGCGGACTGCTGTTGCCAAAGGGTC
CTTGGTCAGAAGCGATGGCGTACGTGCCAGAGGGGACGAACCGGGTTGAC
GGGAGAAGGCTGGAAAACATAGAGAACGCGGTGCGGAGCTCTGTGAATTG
A
back to top