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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Seed ortholog | 112098.XP_008611955.1 |
| PFAMs | Pkinase |
| Max annot lvl | 2759|Eukaryota |
| Evalue | 9.86e-52 |
| EggNOG OGs | KOG0581@1|root,KOG0581@2759|Eukaryota |
| Description | MAP kinase kinase activity |
| COG category | G |
Relationships
This mRNA is a part of the following gene feature(s):
The following stop_codon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following start_codon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Gvermi6778.t1 ID=Gvermi6778.t1|Name=Gvermi6778.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=mRNA|length=916bp MGLSDLVHNLRSKTRSPRTSADSYSTANSQQRVSGETAPLNVDYADYLLA ASSVKLAVASPPAEKPANTHFSEPETRHTSRHRLRLRRSHERKSDPPTNS AKPSSVYISGGRDALPDRPPAEAPVSESRFSRRGVRSHRINSILEHSSRS LNFRFQSSQPPSGNVARARSPNSGPQPQSSSSKPQRDVAYAPAKSPSQSS GSLSFRALPTERSRATRANNNPLRRPRPNRVMSSVDSIFRRDSDSRRFTR SSAPQIANNALSSEVQVRHAVPSSPQRRNANSPPTPRSPVQRISSSLSSH GKSTDPPSKRESAQKQSLSQRSSSAGRILDSDSAQLDQRASADSACPTRE REHAVPLGRSQSTPAKRGSTLKHRMLFSLPLLKVPLTTNTTNVSFKSVRN SSGERRAIKDDSIVYAGLVGQETVRRGRSNVAAQSPERVHRPSSSPPAMQ SSSSTFSNSSQPRNGTSKSRNGLWNEASPRSADGKDTNVSDYLTEADQEL LDPEYIEPISFQTNSFRCANGAPSSPSTPSNGVAEDSFILQIEDTYVDGG FVISLNGLEGTPEKLVRKVSSGMDSDGVPTSSRNLIIVRSLDEFTRVGTI RGNGTLGRGITGSVYLAKHEPTKKYVAVKRINAFDEKKREELKKELTTLI SHESRFLVRSHGAFYDGMNGVHIVLEYMDRGSLDDVVCQYGKIPEPVLRK ITEHCLLGLRFLHENHVLHRDVKTANILMSSKVGRAKLGDFGLARDLKER KANCNSIGEGSTSETETFVGTYTYMSPERLRGNKYTYASDIWGLGMVVIE CALGRPPFDSLHQFFEIVEAVESTPPVSLIEGLVSPELADFIRLSTDHNP KRRLPASELLNHPWITAGHGDRYVLKRWLNELPAMHYDIMGERSGGSVKA QARQLERMRETNQLR* back to topspliced messenger RNA >Gvermi6778.t1 ID=Gvermi6778.t1|Name=Gvermi6778.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=mRNA|length=2748bp|location=Sequence derived from alignment at ScGOVlb_88:2264956..2267703- (Gracilaria vermiculophylla HapMaleFtJ_2017 male)|Notes=Excludes all bases but those of type(s): exon.
ATGGGCCTTTCAGACCTCGTCCACAATCTACGCTCGAAAACCCGCTCCCC GCGAACCTCCGCCGATTCATACTCCACCGCCAACTCGCAGCAACGCGTCT CCGGTGAAACCGCTCCCCTCAACGTCGACTACGCCGACTACCTGCTCGCC GCGTCCTCCGTAAAGCTCGCCGTCGCATCTCCACCGGCGGAAAAGCCCGC TAACACCCATTTCTCCGAGCCCGAAACGCGCCACACCAGTCGCCACCGCC TCCGTCTGCGCCGCTCGCACGAGCGTAAGTCGGACCCGCCCACCAATTCT GCCAAACCGTCCTCGGTCTACATATCCGGCGGTCGAGACGCCCTGCCAGA TCGGCCCCCCGCCGAAGCCCCCGTGTCCGAGAGCCGTTTCTCGCGCCGTG GAGTTCGCAGCCACCGCATCAACAGCATCCTCGAGCACTCGTCCCGCTCG CTCAACTTCCGCTTTCAGTCTTCGCAACCGCCTTCAGGAAACGTCGCCCG CGCCCGCTCACCCAATTCGGGCCCCCAGCCCCAGTCCTCCTCCTCGAAGC CGCAACGAGATGTTGCTTACGCACCCGCCAAGTCCCCGTCACAGTCTTCC GGCTCTCTCTCGTTTCGAGCCCTTCCGACCGAGCGCTCGAGAGCCACCAG GGCGAACAATAATCCACTCCGTCGCCCCCGTCCCAATCGTGTCATGTCCA GCGTGGATAGCATCTTCCGCCGCGATAGCGACTCGAGGCGCTTCACCCGC TCATCGGCACCGCAGATAGCGAACAATGCACTTTCAAGTGAAGTGCAGGT GCGCCATGCAGTCCCAAGCTCTCCACAACGTCGTAACGCGAACAGCCCTC CAACACCGAGATCTCCTGTGCAAAGGATCTCCAGTTCGCTCTCCTCGCAC GGAAAATCAACTGATCCACCAAGCAAGAGAGAAAGCGCCCAGAAACAAAG CCTTAGCCAGAGATCCTCATCAGCGGGACGAATTCTCGATTCTGACTCTG CACAGCTTGATCAACGAGCTTCAGCAGACTCTGCATGTCCCACGCGCGAG AGGGAGCATGCTGTGCCTTTGGGGAGAAGCCAGTCAACGCCTGCTAAGCG AGGCAGCACTTTGAAGCACCGAATGCTATTCAGTTTACCTCTACTCAAAG TGCCGTTAACAACGAACACAACGAATGTTTCCTTCAAGAGTGTGAGAAAT TCCTCCGGGGAACGTAGAGCTATCAAAGATGACAGTATCGTGTATGCTGG TCTTGTCGGCCAAGAAACTGTAAGACGAGGACGATCGAATGTTGCAGCAC AGAGTCCCGAACGTGTCCATCGACCGTCATCATCCCCTCCAGCAATGCAA AGCTCTTCTTCCACTTTTAGCAACTCAAGCCAACCGAGAAATGGTACTTC CAAGTCGCGTAATGGGCTATGGAATGAAGCTTCGCCCAGAAGTGCCGATG GAAAGGATACAAATGTTTCAGATTACCTCACCGAAGCAGATCAAGAACTT CTCGACCCGGAATATATTGAACCTATCAGCTTTCAAACCAATTCGTTTCG CTGCGCAAATGGTGCTCCCAGCTCCCCGAGCACTCCCAGCAATGGTGTTG CTGAAGATAGCTTCATTCTTCAGATTGAAGACACATACGTCGATGGAGGC TTTGTGATATCCCTAAACGGTCTGGAGGGGACCCCCGAAAAGCTAGTTCG CAAAGTCTCGAGCGGCATGGACAGTGATGGTGTTCCTACCTCCAGCAGAA ACCTGATCATTGTGCGAAGCCTAGATGAGTTTACTCGAGTGGGGACCATC CGCGGAAATGGTACGCTTGGCCGAGGGATCACAGGTTCTGTGTACCTTGC GAAACATGAACCGACGAAGAAGTATGTGGCCGTGAAACGAATAAACGCGT TTGATGAAAAGAAACGAGAAGAACTGAAAAAAGAATTGACGACGCTAATC AGCCATGAAAGCAGATTCTTGGTGCGTTCACACGGAGCGTTTTACGACGG AATGAATGGGGTCCATATTGTTCTCGAGTACATGGATCGCGGTTCATTGG ACGATGTGGTTTGTCAATATGGCAAAATACCGGAACCGGTGCTACGCAAA ATAACGGAACATTGTCTTCTCGGCCTTCGCTTCCTCCACGAGAATCACGT CTTGCATCGAGATGTCAAAACAGCTAATATCCTTATGTCATCCAAAGTTG GACGCGCAAAGCTCGGTGATTTCGGACTGGCTCGAGATCTGAAGGAAAGG AAGGCCAATTGTAACAGTATTGGGGAGGGAAGCACGTCGGAGACGGAAAC GTTTGTCGGAACGTATACTTACATGTCACCGGAAAGGCTCCGTGGAAACA AGTACACATATGCTAGTGACATATGGGGACTTGGAATGGTAGTCATCGAG TGCGCACTTGGAAGACCTCCATTTGACAGTCTTCATCAATTCTTCGAAAT TGTTGAAGCGGTAGAAAGTACACCGCCGGTATCTCTGATCGAGGGACTCG TATCTCCAGAACTGGCTGACTTCATTCGTCTCAGCACAGACCATAACCCG AAGAGAAGACTGCCAGCATCGGAGCTTCTCAACCATCCATGGATTACGGC AGGTCACGGTGACCGATACGTGTTGAAGCGATGGCTGAATGAACTACCAG CCATGCACTATGACATCATGGGCGAGCGCTCCGGAGGATCCGTGAAAGCG CAAGCACGGCAGTTGGAGCGAATGCGCGAAACTAATCAACTGCGGTAG back to topprotein sequence of Gvermi6778.t1 >Gvermi6778.t1 ID=Gvermi6778.t1|Name=Gvermi6778.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=916bp
MGLSDLVHNLRSKTRSPRTSADSYSTANSQQRVSGETAPLNVDYADYLLA ASSVKLAVASPPAEKPANTHFSEPETRHTSRHRLRLRRSHERKSDPPTNS AKPSSVYISGGRDALPDRPPAEAPVSESRFSRRGVRSHRINSILEHSSRS LNFRFQSSQPPSGNVARARSPNSGPQPQSSSSKPQRDVAYAPAKSPSQSS GSLSFRALPTERSRATRANNNPLRRPRPNRVMSSVDSIFRRDSDSRRFTR SSAPQIANNALSSEVQVRHAVPSSPQRRNANSPPTPRSPVQRISSSLSSH GKSTDPPSKRESAQKQSLSQRSSSAGRILDSDSAQLDQRASADSACPTRE REHAVPLGRSQSTPAKRGSTLKHRMLFSLPLLKVPLTTNTTNVSFKSVRN SSGERRAIKDDSIVYAGLVGQETVRRGRSNVAAQSPERVHRPSSSPPAMQ SSSSTFSNSSQPRNGTSKSRNGLWNEASPRSADGKDTNVSDYLTEADQEL LDPEYIEPISFQTNSFRCANGAPSSPSTPSNGVAEDSFILQIEDTYVDGG FVISLNGLEGTPEKLVRKVSSGMDSDGVPTSSRNLIIVRSLDEFTRVGTI RGNGTLGRGITGSVYLAKHEPTKKYVAVKRINAFDEKKREELKKELTTLI SHESRFLVRSHGAFYDGMNGVHIVLEYMDRGSLDDVVCQYGKIPEPVLRK ITEHCLLGLRFLHENHVLHRDVKTANILMSSKVGRAKLGDFGLARDLKER KANCNSIGEGSTSETETFVGTYTYMSPERLRGNKYTYASDIWGLGMVVIE CALGRPPFDSLHQFFEIVEAVESTPPVSLIEGLVSPELADFIRLSTDHNP KRRLPASELLNHPWITAGHGDRYVLKRWLNELPAMHYDIMGERSGGSVKA QARQLERMRETNQLR* back to topmRNA from alignment at ScGOVlb_88:2264956..2267703- Legend: polypeptideCDSexonstart_codonstop_codon Hold the cursor over a type above to highlight its positions in the sequence below. >Gvermi6778.t1 ID=Gvermi6778.t1|Name=Gvermi6778.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=mRNA|length=2748bp|location=Sequence derived from alignment at ScGOVlb_88:2264956..2267703- (Gracilaria vermiculophylla HapMaleFtJ_2017 male) ATGGGCCTTTCAGACCTCGTCCACAATCTACGCTCGAAAACCCGCTCCCC
GCGAACCTCCGCCGATTCATACTCCACCGCCAACTCGCAGCAACGCGTCT
CCGGTGAAACCGCTCCCCTCAACGTCGACTACGCCGACTACCTGCTCGCC
GCGTCCTCCGTAAAGCTCGCCGTCGCATCTCCACCGGCGGAAAAGCCCGC
TAACACCCATTTCTCCGAGCCCGAAACGCGCCACACCAGTCGCCACCGCC
TCCGTCTGCGCCGCTCGCACGAGCGTAAGTCGGACCCGCCCACCAATTCT
GCCAAACCGTCCTCGGTCTACATATCCGGCGGTCGAGACGCCCTGCCAGA
TCGGCCCCCCGCCGAAGCCCCCGTGTCCGAGAGCCGTTTCTCGCGCCGTG
GAGTTCGCAGCCACCGCATCAACAGCATCCTCGAGCACTCGTCCCGCTCG
CTCAACTTCCGCTTTCAGTCTTCGCAACCGCCTTCAGGAAACGTCGCCCG
CGCCCGCTCACCCAATTCGGGCCCCCAGCCCCAGTCCTCCTCCTCGAAGC
CGCAACGAGATGTTGCTTACGCACCCGCCAAGTCCCCGTCACAGTCTTCC
GGCTCTCTCTCGTTTCGAGCCCTTCCGACCGAGCGCTCGAGAGCCACCAG
GGCGAACAATAATCCACTCCGTCGCCCCCGTCCCAATCGTGTCATGTCCA
GCGTGGATAGCATCTTCCGCCGCGATAGCGACTCGAGGCGCTTCACCCGC
TCATCGGCACCGCAGATAGCGAACAATGCACTTTCAAGTGAAGTGCAGGT
GCGCCATGCAGTCCCAAGCTCTCCACAACGTCGTAACGCGAACAGCCCTC
CAACACCGAGATCTCCTGTGCAAAGGATCTCCAGTTCGCTCTCCTCGCAC
GGAAAATCAACTGATCCACCAAGCAAGAGAGAAAGCGCCCAGAAACAAAG
CCTTAGCCAGAGATCCTCATCAGCGGGACGAATTCTCGATTCTGACTCTG
CACAGCTTGATCAACGAGCTTCAGCAGACTCTGCATGTCCCACGCGCGAG
AGGGAGCATGCTGTGCCTTTGGGGAGAAGCCAGTCAACGCCTGCTAAGCG
AGGCAGCACTTTGAAGCACCGAATGCTATTCAGTTTACCTCTACTCAAAG
TGCCGTTAACAACGAACACAACGAATGTTTCCTTCAAGAGTGTGAGAAAT
TCCTCCGGGGAACGTAGAGCTATCAAAGATGACAGTATCGTGTATGCTGG
TCTTGTCGGCCAAGAAACTGTAAGACGAGGACGATCGAATGTTGCAGCAC
AGAGTCCCGAACGTGTCCATCGACCGTCATCATCCCCTCCAGCAATGCAA
AGCTCTTCTTCCACTTTTAGCAACTCAAGCCAACCGAGAAATGGTACTTC
CAAGTCGCGTAATGGGCTATGGAATGAAGCTTCGCCCAGAAGTGCCGATG
GAAAGGATACAAATGTTTCAGATTACCTCACCGAAGCAGATCAAGAACTT
CTCGACCCGGAATATATTGAACCTATCAGCTTTCAAACCAATTCGTTTCG
CTGCGCAAATGGTGCTCCCAGCTCCCCGAGCACTCCCAGCAATGGTGTTG
CTGAAGATAGCTTCATTCTTCAGATTGAAGACACATACGTCGATGGAGGC
TTTGTGATATCCCTAAACGGTCTGGAGGGGACCCCCGAAAAGCTAGTTCG
CAAAGTCTCGAGCGGCATGGACAGTGATGGTGTTCCTACCTCCAGCAGAA
ACCTGATCATTGTGCGAAGCCTAGATGAGTTTACTCGAGTGGGGACCATC
CGCGGAAATGGTACGCTTGGCCGAGGGATCACAGGTTCTGTGTACCTTGC
GAAACATGAACCGACGAAGAAGTATGTGGCCGTGAAACGAATAAACGCGT
TTGATGAAAAGAAACGAGAAGAACTGAAAAAAGAATTGACGACGCTAATC
AGCCATGAAAGCAGATTCTTGGTGCGTTCACACGGAGCGTTTTACGACGG
AATGAATGGGGTCCATATTGTTCTCGAGTACATGGATCGCGGTTCATTGG
ACGATGTGGTTTGTCAATATGGCAAAATACCGGAACCGGTGCTACGCAAA
ATAACGGAACATTGTCTTCTCGGCCTTCGCTTCCTCCACGAGAATCACGT
CTTGCATCGAGATGTCAAAACAGCTAATATCCTTATGTCATCCAAAGTTG
GACGCGCAAAGCTCGGTGATTTCGGACTGGCTCGAGATCTGAAGGAAAGG
AAGGCCAATTGTAACAGTATTGGGGAGGGAAGCACGTCGGAGACGGAAAC
GTTTGTCGGAACGTATACTTACATGTCACCGGAAAGGCTCCGTGGAAACA
AGTACACATATGCTAGTGACATATGGGGACTTGGAATGGTAGTCATCGAG
TGCGCACTTGGAAGACCTCCATTTGACAGTCTTCATCAATTCTTCGAAAT
TGTTGAAGCGGTAGAAAGTACACCGCCGGTATCTCTGATCGAGGGACTCG
TATCTCCAGAACTGGCTGACTTCATTCGTCTCAGCACAGACCATAACCCG
AAGAGAAGACTGCCAGCATCGGAGCTTCTCAACCATCCATGGATTACGGC
AGGTCACGGTGACCGATACGTGTTGAAGCGATGGCTGAATGAACTACCAG
CCATGCACTATGACATCATGGGCGAGCGCTCCGGAGGATCCGTGAAAGCG
CAAGCACGGCAGTTGGAGCGAATGCGCGAAACTAATCAACTGCGGTAG back to topCoding sequence (CDS) from alignment at ScGOVlb_88:2264956..2267703- >Gvermi6778.t1 ID=Gvermi6778.t1|Name=Gvermi6778.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=CDS|length=2748bp|location=Sequence derived from alignment at ScGOVlb_88:2264956..2267703- (Gracilaria vermiculophylla HapMaleFtJ_2017 male) ATGGGCCTTTCAGACCTCGTCCACAATCTACGCTCGAAAACCCGCTCCCC GCGAACCTCCGCCGATTCATACTCCACCGCCAACTCGCAGCAACGCGTCT CCGGTGAAACCGCTCCCCTCAACGTCGACTACGCCGACTACCTGCTCGCC GCGTCCTCCGTAAAGCTCGCCGTCGCATCTCCACCGGCGGAAAAGCCCGC TAACACCCATTTCTCCGAGCCCGAAACGCGCCACACCAGTCGCCACCGCC TCCGTCTGCGCCGCTCGCACGAGCGTAAGTCGGACCCGCCCACCAATTCT GCCAAACCGTCCTCGGTCTACATATCCGGCGGTCGAGACGCCCTGCCAGA TCGGCCCCCCGCCGAAGCCCCCGTGTCCGAGAGCCGTTTCTCGCGCCGTG GAGTTCGCAGCCACCGCATCAACAGCATCCTCGAGCACTCGTCCCGCTCG CTCAACTTCCGCTTTCAGTCTTCGCAACCGCCTTCAGGAAACGTCGCCCG CGCCCGCTCACCCAATTCGGGCCCCCAGCCCCAGTCCTCCTCCTCGAAGC CGCAACGAGATGTTGCTTACGCACCCGCCAAGTCCCCGTCACAGTCTTCC GGCTCTCTCTCGTTTCGAGCCCTTCCGACCGAGCGCTCGAGAGCCACCAG GGCGAACAATAATCCACTCCGTCGCCCCCGTCCCAATCGTGTCATGTCCA GCGTGGATAGCATCTTCCGCCGCGATAGCGACTCGAGGCGCTTCACCCGC TCATCGGCACCGCAGATAGCGAACAATGCACTTTCAAGTGAAGTGCAGGT GCGCCATGCAGTCCCAAGCTCTCCACAACGTCGTAACGCGAACAGCCCTC CAACACCGAGATCTCCTGTGCAAAGGATCTCCAGTTCGCTCTCCTCGCAC GGAAAATCAACTGATCCACCAAGCAAGAGAGAAAGCGCCCAGAAACAAAG CCTTAGCCAGAGATCCTCATCAGCGGGACGAATTCTCGATTCTGACTCTG CACAGCTTGATCAACGAGCTTCAGCAGACTCTGCATGTCCCACGCGCGAG AGGGAGCATGCTGTGCCTTTGGGGAGAAGCCAGTCAACGCCTGCTAAGCG AGGCAGCACTTTGAAGCACCGAATGCTATTCAGTTTACCTCTACTCAAAG TGCCGTTAACAACGAACACAACGAATGTTTCCTTCAAGAGTGTGAGAAAT TCCTCCGGGGAACGTAGAGCTATCAAAGATGACAGTATCGTGTATGCTGG TCTTGTCGGCCAAGAAACTGTAAGACGAGGACGATCGAATGTTGCAGCAC AGAGTCCCGAACGTGTCCATCGACCGTCATCATCCCCTCCAGCAATGCAA AGCTCTTCTTCCACTTTTAGCAACTCAAGCCAACCGAGAAATGGTACTTC CAAGTCGCGTAATGGGCTATGGAATGAAGCTTCGCCCAGAAGTGCCGATG GAAAGGATACAAATGTTTCAGATTACCTCACCGAAGCAGATCAAGAACTT CTCGACCCGGAATATATTGAACCTATCAGCTTTCAAACCAATTCGTTTCG CTGCGCAAATGGTGCTCCCAGCTCCCCGAGCACTCCCAGCAATGGTGTTG CTGAAGATAGCTTCATTCTTCAGATTGAAGACACATACGTCGATGGAGGC TTTGTGATATCCCTAAACGGTCTGGAGGGGACCCCCGAAAAGCTAGTTCG CAAAGTCTCGAGCGGCATGGACAGTGATGGTGTTCCTACCTCCAGCAGAA ACCTGATCATTGTGCGAAGCCTAGATGAGTTTACTCGAGTGGGGACCATC CGCGGAAATGGTACGCTTGGCCGAGGGATCACAGGTTCTGTGTACCTTGC GAAACATGAACCGACGAAGAAGTATGTGGCCGTGAAACGAATAAACGCGT TTGATGAAAAGAAACGAGAAGAACTGAAAAAAGAATTGACGACGCTAATC AGCCATGAAAGCAGATTCTTGGTGCGTTCACACGGAGCGTTTTACGACGG AATGAATGGGGTCCATATTGTTCTCGAGTACATGGATCGCGGTTCATTGG ACGATGTGGTTTGTCAATATGGCAAAATACCGGAACCGGTGCTACGCAAA ATAACGGAACATTGTCTTCTCGGCCTTCGCTTCCTCCACGAGAATCACGT CTTGCATCGAGATGTCAAAACAGCTAATATCCTTATGTCATCCAAAGTTG GACGCGCAAAGCTCGGTGATTTCGGACTGGCTCGAGATCTGAAGGAAAGG AAGGCCAATTGTAACAGTATTGGGGAGGGAAGCACGTCGGAGACGGAAAC GTTTGTCGGAACGTATACTTACATGTCACCGGAAAGGCTCCGTGGAAACA AGTACACATATGCTAGTGACATATGGGGACTTGGAATGGTAGTCATCGAG TGCGCACTTGGAAGACCTCCATTTGACAGTCTTCATCAATTCTTCGAAAT TGTTGAAGCGGTAGAAAGTACACCGCCGGTATCTCTGATCGAGGGACTCG TATCTCCAGAACTGGCTGACTTCATTCGTCTCAGCACAGACCATAACCCG AAGAGAAGACTGCCAGCATCGGAGCTTCTCAACCATCCATGGATTACGGC AGGTCACGGTGACCGATACGTGTTGAAGCGATGGCTGAATGAACTACCAG CCATGCACTATGACATCATGGGCGAGCGCTCCGGAGGATCCGTGAAAGCG CAAGCACGGCAGTTGGAGCGAATGCGCGAAACTAATCAACTGCGGTAG back to top
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