Gvermi6777.t1 (mRNA) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGvermi6777.t1
Unique NameGvermi6777.t1
TypemRNA
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length1464
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_88contigScGOVlb_88:2259219..2263610 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Properties
Property NameValue
Seed ortholog5786.XP_003288635.1
PFAMsPeptidase_M1
Max annot lvl554915|Amoebozoa
KEGG koko:K03128
KEGG Pathwayko03022,map03022
Evalue2.66e-71
EggNOG OGsKOG1932@1|root,KOG2217@1|root,KOG1932@2759|Eukaryota,KOG2217@2759|Eukaryota,3X8RJ@554915|Amoebozoa
Descriptionmaturation of 5S rRNA
COG categoryK
BRITEko00000,ko00001,ko01002,ko03021,ko03036
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi6777Gvermi6777Gracilaria vermiculophylla HapMaleFtJ_2017 malegeneScGOVlb_88 2259219..2263610 +


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gvermi6777.t1.start1Gvermi6777.t1.start1Gracilaria vermiculophylla HapMaleFtJ_2017 malestart_codonScGOVlb_88 2259219..2259221 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gvermi6777.t1.CDS1Gvermi6777.t1.CDS1Gracilaria vermiculophylla HapMaleFtJ_2017 maleCDSScGOVlb_88 2259219..2263610 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gvermi6777.t1.exon1Gvermi6777.t1.exon1Gracilaria vermiculophylla HapMaleFtJ_2017 maleexonScGOVlb_88 2259219..2263610 +


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gvermi6777.t1.stop1Gvermi6777.t1.stop1Gracilaria vermiculophylla HapMaleFtJ_2017 malestop_codonScGOVlb_88 2263608..2263610 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gvermi6777.t1Gvermi6777.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malepolypeptideScGOVlb_88 2259219..2263610 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Gvermi6777.t1 ID=Gvermi6777.t1|Name=Gvermi6777.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=mRNA|length=1464bp
MVTSAKSDKTRPPSFHPVELARGWRILNQHLTLHVDVRKRTLTGSAHFTF
CALNIHFVSICLNLRRCRVNSCQIASSPAPYRLVSPLDDDQLLGAVSSPT
SRARVVDVDHSMRQRQKAASEQGELVIDLPVSVTADLIDDLKQLVVDSSS
HNIKPQDIDLESHLTPSVTLDKLPVVHLKLDYQVLDPNAGAMFFGNLHAE
NDVLDPLYMLTESRFGMARFWMPCIDTINWYDRCLFDLDVVVDSHLLAVA
SGELHQTVALPSEASPSQSPAKMYKYSLYAPALASEIILAVGPFIPLPDP
TVPHSITHFCLPGYAKELVHTAPPLLAKSLAFCRDYFGADPPICSYKQIF
VGSLGLDPNTTVTGAGGIVVLSGDLLHTPRCIDEAFAAREAIMNGVVMTY
SGRFLRPRLLEDDWLITGLAAHVSALGLQTILGRNWYTFRIWDIMEELRN
KPSLDLADSNLDRITDSSRAIIRQRSHMIVYMIAKRIGGDVLKRALRDIV
AEGRSATIAAVSKIDAILTSIAQCNTNSSSETRMPFHRKLTDMINANLNS
SENQSVVTSGFDDAIQGVGVGPFLKRIRGIIGTDVRNMVRQWASHPGIPR
IQVAYHYNARKHTIELAIKQESIGNISTNGKKGLRFTGTINIRVMETEGE
YDHSVEISDSVFIAEIPCHSRRAKHKSGAQAEKEFNENPARASPILWMRF
DPDQEWCMDVNFRQTKSAWISVLNSGRDAMGQFEACRGLAGSGHQAIVNK
LLTVLKDEQIYWRVRAEAARILSSTDEGLKTLISYFCSCYTEKSKEQNGV
FLPHNFSNFANYYVKRAILSSIAESRVRGSRTAERPQGSISQDAAKFLAS
VLASHDNAGNEYEDDHFLGDLLQSCAAVAINCLGDPRHASGGYDGLSTTE
SIMKLMERFRAIEHMVPRRSGLVKSALLKAVSDIEVSKLSRRDVMEKGAV
AKAITECKFVQDSNLVKGLFELSGRDCSVDCRYAAACCLANMYGGDLEVV
LWILTRVDSASSGARLSDLSKLFREKQEVSADYAFTEAPVLRYKLLEVLN
SAARVKSWHRSVSPIVLALRRNTRRAMQVCIRLQKLMVADADPRVRASAL
SFSKFVWGAGVPVCLLTNREYREKLRITDLREPTNLVPLKMNASTLPPQL
TEPRKESSKQSKPHKSSKSSKHGRNGKVSLKPSRKHHFKIPPSEPLRTNP
PIVREPNLAPIDVDATVPLSVPRPSPYKPPLKSVPAPVIRKPPKSQPVSR
AKPPVTKRPTWKQPVSKPREVDVKKLSPFRSVPAAPRSVPPSKPGLPPKG
AFSWDPLDAEDLRYLRKAWEERKSRQARPPRSPFTSVPIRSKPVVTASKT
IRPGTPTQTDEGVKSWNGTESDEVVFVPRTEDGLENGVNGAHPSEPKKKK
KRKRLDDDARDGKKKKKKKKKRNRDEFGEGDSSRTGTDGDDNRKVGKFKI
CFNGPLAHVARSE*
back to top

spliced messenger RNA

>Gvermi6777.t1 ID=Gvermi6777.t1|Name=Gvermi6777.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=mRNA|length=4392bp|location=Sequence derived from alignment at ScGOVlb_88:2259219..2263610+ (Gracilaria vermiculophylla HapMaleFtJ_2017 male)|Notes=Excludes all bases but those of type(s): exon.  
ATGGTAACGTCCGCCAAGTCCGACAAGACAAGGCCCCCCTCCTTCCACCC
CGTCGAGCTTGCAAGGGGTTGGAGGATTCTTAACCAACACCTCACCCTTC
ATGTCGATGTCCGCAAGCGAACCCTCACCGGTTCGGCTCATTTCACTTTC
TGCGCCCTCAATATTCACTTTGTTAGCATTTGCCTCAACCTGCGTCGATG
TCGCGTCAATTCGTGCCAAATAGCCTCTAGCCCCGCCCCGTATCGTCTCG
TTTCTCCCTTGGACGATGACCAGTTGCTGGGCGCCGTTTCCTCGCCGACC
AGCAGGGCGCGAGTCGTCGATGTTGACCATAGCATGCGCCAACGCCAAAA
AGCTGCCTCCGAACAAGGAGAACTAGTCATTGACTTGCCGGTCAGCGTCA
CGGCTGACCTTATCGACGACCTCAAGCAACTCGTTGTCGACTCCAGTTCG
CACAATATCAAACCACAAGATATCGACTTGGAGTCACACCTTACTCCGTC
TGTCACCCTAGACAAGCTTCCCGTTGTCCACCTCAAGCTGGACTACCAAG
TACTAGACCCCAATGCCGGAGCCATGTTCTTCGGCAACCTTCACGCCGAA
AACGACGTCCTTGACCCGCTCTACATGCTCACTGAAAGTCGCTTTGGCAT
GGCTCGATTCTGGATGCCGTGTATAGACACTATAAATTGGTATGACCGCT
GCCTCTTCGACCTAGACGTCGTGGTTGATTCCCATTTGCTTGCTGTGGCA
TCAGGCGAACTCCACCAAACCGTTGCCTTGCCCTCCGAGGCATCGCCGTC
ACAGTCCCCAGCCAAGATGTACAAATACAGCCTCTATGCCCCGGCACTGG
CTTCCGAGATCATTCTCGCTGTTGGTCCCTTCATCCCCTTACCTGACCCT
ACCGTTCCTCACTCTATAACTCATTTCTGCCTTCCGGGCTACGCTAAAGA
GCTAGTTCACACCGCTCCTCCGTTGCTCGCTAAATCCCTCGCATTCTGTC
GCGATTACTTTGGAGCCGACCCTCCAATATGTTCATACAAACAGATTTTC
GTTGGGTCGCTCGGCCTAgacccaaacaccaccgtcactggagctggtgg
catagtcgtactttCCGGAGACTTGCTGCACACACCAAGATGTATTGATG
AAGCGTTTGCTGCCAGAGAAGCCATTATGAACGGTGTCGTCATGACGTAT
AGCGGAAGATTTCTCCGCCCACGCTTGCTTGAAGATGACTGGCTTATCAC
AGGGCTGGCAGCCCATGTTTCTGCGCTTGGTCTGCAGACCATCCTCGGCA
GAAACTGGTACACGTTCCGAATATGGGATATTATGGAGGAGCTAAGAAAC
AAACCATCTCTAGATCTTGCTGATTCCAATCTCGATCGAATTACTGACTC
CTCCCGTGCCATTATCCGCCAGCGCTCTCATATGATTGTTTACATGATCG
CCAAGAGAATTGGCGGTGATGTGTTGAAGCGAGCTTTGCGTGATATCGTT
GCCGAGGGTCGCAGTGCAACCATAGCGGCTGTCTCCAAGATTGACGCGAT
TTTGACAAGTATTGCGCAGTGCAATACTAACTCCAGTTCTGAAACACGAA
TGCCTTTCCATCGAAAGCTCACTGACATGATAAACGCTAACTTGAACTCC
AGTGAAAACCAGAGCGTTGTCACTAGTGGCTTTGATGATGCAATCCAAGG
CGTTGGCGTTGGACCGTTTTTGAAAAGGATACGTGGTATTATTGGCACTG
ACGTGCGAAACATGGTGCGGCAATGGGCGTCACATCCGGGAATTCCAAGG
ATTCAGGTTGCCTATCATTACAACGCGAGGAAACACACCATCGAACTCGC
TATCAAACAGGAAAGTATTGGCAATATATCTACCAATGGGAAAAAAGGAC
TTCGTTTCACAGGAACCATAAACATCAGGGTTATGGAAACAGAAGGGGAG
TACGATCACAGCGTTGAAATTTCAGACTCTGTTTTCATAGCGGAGATCCC
ATGTCATTCACGGCGTGCGAAACACAAGTCTGGTGCCCAAGCTGAAAAGG
AATTTAATGAAAACCCCGCACGGGCCTCGCCGATTCTTTGGATGAGGTTT
GACCCCGACCAGGAGTGGTGCATGGATGTCAACTTTAGACAAACAAAGAG
TGCCTGGATATCGGTACTGAACTCTGGAAGGGACGCAATGGGACAATTTG
AAGCCTGCAGAGGCCTTGCGGGTTCGGGCCATCAAGCGATCGTCAACAAG
CTGCTAACTGTTTTGAAGGACGAGCAAATTTACTGGAGAGTTCGCGCAGA
GGCGGCAAGAATTCTGAGCTCCACTGATGAAGGGTTGAAAACACTTATCT
CTTATTTCTGTTCCTGTTACACGGAGAAGTCGAAGGAGCAAAATGGGGTC
TTCTTGCCGCACAACTTTTCAAACTTCGCGAACTACTACGTGAAACGCGC
AATTCTTTCATCGATTGCCGAATCCCGAGTGAGGGGGTCCCGCACGGCGG
AAAGACCCCAAGGCTCGATCAGTCAGGACGCAGCCAAGTTCCTCGCATCT
GTGTTGGCAAGCCATGACAACGCTGGAAACGAATATGAGGACGACCACTT
CCTTGGCGACCTGCTCCAGTCCTGCGCAGCTGTGGCGATAAATTGTCTAG
GGGATCCCAGACACGCGTCAGGTGGGTACGATGGGCTGTCAACCACCGAG
TCTATCATGAAGCTTATGGAGAGGTTTCGGGCAATCGAGCACATGGTGCC
GAGGCGGTCTGGTCTCGTGAAATCCGCGCTTCTGAAAGCTGTTTCGGATA
TTGAAGTGTCTAAGCTCTCAAGACGGGACGTGATGGAGAAGGGGGCCGTT
GCGAAGGCCATAACAGAGTGTAAGTTTGTTCAAGACTCAAATTTGGTCAA
AGGCTTGTTCGAACTCTCTGGCCGGGATTGCTCCGTTGACTGTCGGTATG
CAGCAGCGTGCTGCCTCGCCAACATGTACGGAGGGGACTTAGAGGTCGTG
TTATGGATCCTCACCCGAGTGGACAGCGCAAGTTCAGGTGCCCGTCTAAG
TGACTTGTCCAAACTGTTTCGGGAAAAGCAAGAGGTTTCAGCGGACTACG
CTTTCACCGAAGCCCCAGTTTTGCGATACAAGCTCTTGGAGGTTCTGAAC
TCGGCTGCTAGGGTGAAGTCTTGGCATCGGTCCGTATCGCCGATCGTGTT
AGCGCTCCGAAGAAACACCAGGCGGGCGATGCAGGTTTGCATCCGGCTTC
AGAAGCTGATGGTTGCGGATGCAGATCCTAGAGTCCGGGCCTCAGCATTA
TCTTTTTCCAAGTTCGTCTGGGGGGCCGGAGTTCCCGTGTGCCTTCTTAC
AAACCGCGAGTATCGGGAAAAGCTCCGTATTACAGATCTTCGGGAGCCGA
CAAATTTGGTGCCTCTCAAAATGAACGCCAGCACCTTACCCCCGCAGCTG
ACCGAACCACGGAAGGAGTCAAGCAAGCAATCGAAGCCGCACAAATCGTC
GAAGTCCTCAAAGCACGGCAGGAACGGAAAGGTATCTTTGAAGCCGTCAA
GAAAACACCACTTTAAGATACCACCCAGTGAACCGCTGAGGACTAATCCG
CCGATTGTGAGAGAGCCGAATCTTGCTCCCATTGACGTGGATGCCACTGT
TCCTCTGTCTGTCCCAAGGCCGTCGCCGTACAAGCCTCCGTTAAAGTCTG
TACCGGCGCCTGTAATTCGGAAGCCCCCAAAGTCACAGCCGGTTTCCAGA
GCGAAACCGCCTGTCACAAAGCGGCCAACTTGGAAGCAGCCGGTTTCGAA
ACCAAGGGAAGTGGATGTGAAGAAGTTGTCCCCGTTCCGAAGTGTTCCGG
CTGCGCCAAGGAGTGTACCGCCGAGCAAACCTGGTCTCCCGCCGAAAGGG
GCCTTTTCGTGGGATCCGTTGGATGCAGAAGACTTGCGGTACTTACGGAA
GGCATGGGAAGAGCGCAAGTCACGCCAAGCACGTCCACCACGCTCTCCGT
TCACGTCTGTGCCAATCAGATCAAAACCAGTAGTCACTGCATCAAAGACG
ATCAGACCTGGTACACCTACTCAAACAGATGAAGGTGTAAAGTCTTGGAA
CGGCACGGAATCCGACGAGGTTGTGTTCGTTCCAAGGACTGAAGATGGCC
TAGAGAATGGAGTGAACGGCGCTCATCCTTCTGAGCCGAAGAAGAAAAAG
AAGCGCAAGCGTTTGGATGATGACGCCCGGGATGGGAAGAAAAAGAAAAA
GAAGAAAAAGAAACGCAACAGGGACGAATTCGGTGAGGGAGATTCTAGCA
GGACTGGTACAGATGGGGACGACAACCGGAAAGTTGGAAAATTCAAGATC
TGTTTTAACGGACCGCTAGCTCATGTAGCTCGAAGTGAGTAG
back to top

protein sequence of Gvermi6777.t1

>Gvermi6777.t1 ID=Gvermi6777.t1|Name=Gvermi6777.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=1464bp
MVTSAKSDKTRPPSFHPVELARGWRILNQHLTLHVDVRKRTLTGSAHFTF
CALNIHFVSICLNLRRCRVNSCQIASSPAPYRLVSPLDDDQLLGAVSSPT
SRARVVDVDHSMRQRQKAASEQGELVIDLPVSVTADLIDDLKQLVVDSSS
HNIKPQDIDLESHLTPSVTLDKLPVVHLKLDYQVLDPNAGAMFFGNLHAE
NDVLDPLYMLTESRFGMARFWMPCIDTINWYDRCLFDLDVVVDSHLLAVA
SGELHQTVALPSEASPSQSPAKMYKYSLYAPALASEIILAVGPFIPLPDP
TVPHSITHFCLPGYAKELVHTAPPLLAKSLAFCRDYFGADPPICSYKQIF
VGSLGLDPNTTVTGAGGIVVLSGDLLHTPRCIDEAFAAREAIMNGVVMTY
SGRFLRPRLLEDDWLITGLAAHVSALGLQTILGRNWYTFRIWDIMEELRN
KPSLDLADSNLDRITDSSRAIIRQRSHMIVYMIAKRIGGDVLKRALRDIV
AEGRSATIAAVSKIDAILTSIAQCNTNSSSETRMPFHRKLTDMINANLNS
SENQSVVTSGFDDAIQGVGVGPFLKRIRGIIGTDVRNMVRQWASHPGIPR
IQVAYHYNARKHTIELAIKQESIGNISTNGKKGLRFTGTINIRVMETEGE
YDHSVEISDSVFIAEIPCHSRRAKHKSGAQAEKEFNENPARASPILWMRF
DPDQEWCMDVNFRQTKSAWISVLNSGRDAMGQFEACRGLAGSGHQAIVNK
LLTVLKDEQIYWRVRAEAARILSSTDEGLKTLISYFCSCYTEKSKEQNGV
FLPHNFSNFANYYVKRAILSSIAESRVRGSRTAERPQGSISQDAAKFLAS
VLASHDNAGNEYEDDHFLGDLLQSCAAVAINCLGDPRHASGGYDGLSTTE
SIMKLMERFRAIEHMVPRRSGLVKSALLKAVSDIEVSKLSRRDVMEKGAV
AKAITECKFVQDSNLVKGLFELSGRDCSVDCRYAAACCLANMYGGDLEVV
LWILTRVDSASSGARLSDLSKLFREKQEVSADYAFTEAPVLRYKLLEVLN
SAARVKSWHRSVSPIVLALRRNTRRAMQVCIRLQKLMVADADPRVRASAL
SFSKFVWGAGVPVCLLTNREYREKLRITDLREPTNLVPLKMNASTLPPQL
TEPRKESSKQSKPHKSSKSSKHGRNGKVSLKPSRKHHFKIPPSEPLRTNP
PIVREPNLAPIDVDATVPLSVPRPSPYKPPLKSVPAPVIRKPPKSQPVSR
AKPPVTKRPTWKQPVSKPREVDVKKLSPFRSVPAAPRSVPPSKPGLPPKG
AFSWDPLDAEDLRYLRKAWEERKSRQARPPRSPFTSVPIRSKPVVTASKT
IRPGTPTQTDEGVKSWNGTESDEVVFVPRTEDGLENGVNGAHPSEPKKKK
KRKRLDDDARDGKKKKKKKKKRNRDEFGEGDSSRTGTDGDDNRKVGKFKI
CFNGPLAHVARSE*
back to top

mRNA from alignment at ScGOVlb_88:2259219..2263610+

Legend: start_codonpolypeptideCDSexonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Gvermi6777.t1 ID=Gvermi6777.t1|Name=Gvermi6777.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=mRNA|length=4392bp|location=Sequence derived from alignment at ScGOVlb_88:2259219..2263610+ (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
ATGGTAACGTCCGCCAAGTCCGACAAGACAAGGCCCCCCTCCTTCCACCC CGTCGAGCTTGCAAGGGGTTGGAGGATTCTTAACCAACACCTCACCCTTC ATGTCGATGTCCGCAAGCGAACCCTCACCGGTTCGGCTCATTTCACTTTC TGCGCCCTCAATATTCACTTTGTTAGCATTTGCCTCAACCTGCGTCGATG TCGCGTCAATTCGTGCCAAATAGCCTCTAGCCCCGCCCCGTATCGTCTCG TTTCTCCCTTGGACGATGACCAGTTGCTGGGCGCCGTTTCCTCGCCGACC AGCAGGGCGCGAGTCGTCGATGTTGACCATAGCATGCGCCAACGCCAAAA AGCTGCCTCCGAACAAGGAGAACTAGTCATTGACTTGCCGGTCAGCGTCA CGGCTGACCTTATCGACGACCTCAAGCAACTCGTTGTCGACTCCAGTTCG CACAATATCAAACCACAAGATATCGACTTGGAGTCACACCTTACTCCGTC TGTCACCCTAGACAAGCTTCCCGTTGTCCACCTCAAGCTGGACTACCAAG TACTAGACCCCAATGCCGGAGCCATGTTCTTCGGCAACCTTCACGCCGAA AACGACGTCCTTGACCCGCTCTACATGCTCACTGAAAGTCGCTTTGGCAT GGCTCGATTCTGGATGCCGTGTATAGACACTATAAATTGGTATGACCGCT GCCTCTTCGACCTAGACGTCGTGGTTGATTCCCATTTGCTTGCTGTGGCA TCAGGCGAACTCCACCAAACCGTTGCCTTGCCCTCCGAGGCATCGCCGTC ACAGTCCCCAGCCAAGATGTACAAATACAGCCTCTATGCCCCGGCACTGG CTTCCGAGATCATTCTCGCTGTTGGTCCCTTCATCCCCTTACCTGACCCT ACCGTTCCTCACTCTATAACTCATTTCTGCCTTCCGGGCTACGCTAAAGA GCTAGTTCACACCGCTCCTCCGTTGCTCGCTAAATCCCTCGCATTCTGTC GCGATTACTTTGGAGCCGACCCTCCAATATGTTCATACAAACAGATTTTC GTTGGGTCGCTCGGCCTAgacccaaacaccaccgtcactggagctggtgg catagtcgtactttCCGGAGACTTGCTGCACACACCAAGATGTATTGATG AAGCGTTTGCTGCCAGAGAAGCCATTATGAACGGTGTCGTCATGACGTAT AGCGGAAGATTTCTCCGCCCACGCTTGCTTGAAGATGACTGGCTTATCAC AGGGCTGGCAGCCCATGTTTCTGCGCTTGGTCTGCAGACCATCCTCGGCA GAAACTGGTACACGTTCCGAATATGGGATATTATGGAGGAGCTAAGAAAC AAACCATCTCTAGATCTTGCTGATTCCAATCTCGATCGAATTACTGACTC CTCCCGTGCCATTATCCGCCAGCGCTCTCATATGATTGTTTACATGATCG CCAAGAGAATTGGCGGTGATGTGTTGAAGCGAGCTTTGCGTGATATCGTT GCCGAGGGTCGCAGTGCAACCATAGCGGCTGTCTCCAAGATTGACGCGAT TTTGACAAGTATTGCGCAGTGCAATACTAACTCCAGTTCTGAAACACGAA TGCCTTTCCATCGAAAGCTCACTGACATGATAAACGCTAACTTGAACTCC AGTGAAAACCAGAGCGTTGTCACTAGTGGCTTTGATGATGCAATCCAAGG CGTTGGCGTTGGACCGTTTTTGAAAAGGATACGTGGTATTATTGGCACTG ACGTGCGAAACATGGTGCGGCAATGGGCGTCACATCCGGGAATTCCAAGG ATTCAGGTTGCCTATCATTACAACGCGAGGAAACACACCATCGAACTCGC TATCAAACAGGAAAGTATTGGCAATATATCTACCAATGGGAAAAAAGGAC TTCGTTTCACAGGAACCATAAACATCAGGGTTATGGAAACAGAAGGGGAG TACGATCACAGCGTTGAAATTTCAGACTCTGTTTTCATAGCGGAGATCCC ATGTCATTCACGGCGTGCGAAACACAAGTCTGGTGCCCAAGCTGAAAAGG AATTTAATGAAAACCCCGCACGGGCCTCGCCGATTCTTTGGATGAGGTTT GACCCCGACCAGGAGTGGTGCATGGATGTCAACTTTAGACAAACAAAGAG TGCCTGGATATCGGTACTGAACTCTGGAAGGGACGCAATGGGACAATTTG AAGCCTGCAGAGGCCTTGCGGGTTCGGGCCATCAAGCGATCGTCAACAAG CTGCTAACTGTTTTGAAGGACGAGCAAATTTACTGGAGAGTTCGCGCAGA GGCGGCAAGAATTCTGAGCTCCACTGATGAAGGGTTGAAAACACTTATCT CTTATTTCTGTTCCTGTTACACGGAGAAGTCGAAGGAGCAAAATGGGGTC TTCTTGCCGCACAACTTTTCAAACTTCGCGAACTACTACGTGAAACGCGC AATTCTTTCATCGATTGCCGAATCCCGAGTGAGGGGGTCCCGCACGGCGG AAAGACCCCAAGGCTCGATCAGTCAGGACGCAGCCAAGTTCCTCGCATCT GTGTTGGCAAGCCATGACAACGCTGGAAACGAATATGAGGACGACCACTT CCTTGGCGACCTGCTCCAGTCCTGCGCAGCTGTGGCGATAAATTGTCTAG GGGATCCCAGACACGCGTCAGGTGGGTACGATGGGCTGTCAACCACCGAG TCTATCATGAAGCTTATGGAGAGGTTTCGGGCAATCGAGCACATGGTGCC GAGGCGGTCTGGTCTCGTGAAATCCGCGCTTCTGAAAGCTGTTTCGGATA TTGAAGTGTCTAAGCTCTCAAGACGGGACGTGATGGAGAAGGGGGCCGTT GCGAAGGCCATAACAGAGTGTAAGTTTGTTCAAGACTCAAATTTGGTCAA AGGCTTGTTCGAACTCTCTGGCCGGGATTGCTCCGTTGACTGTCGGTATG CAGCAGCGTGCTGCCTCGCCAACATGTACGGAGGGGACTTAGAGGTCGTG TTATGGATCCTCACCCGAGTGGACAGCGCAAGTTCAGGTGCCCGTCTAAG TGACTTGTCCAAACTGTTTCGGGAAAAGCAAGAGGTTTCAGCGGACTACG CTTTCACCGAAGCCCCAGTTTTGCGATACAAGCTCTTGGAGGTTCTGAAC TCGGCTGCTAGGGTGAAGTCTTGGCATCGGTCCGTATCGCCGATCGTGTT AGCGCTCCGAAGAAACACCAGGCGGGCGATGCAGGTTTGCATCCGGCTTC AGAAGCTGATGGTTGCGGATGCAGATCCTAGAGTCCGGGCCTCAGCATTA TCTTTTTCCAAGTTCGTCTGGGGGGCCGGAGTTCCCGTGTGCCTTCTTAC AAACCGCGAGTATCGGGAAAAGCTCCGTATTACAGATCTTCGGGAGCCGA CAAATTTGGTGCCTCTCAAAATGAACGCCAGCACCTTACCCCCGCAGCTG ACCGAACCACGGAAGGAGTCAAGCAAGCAATCGAAGCCGCACAAATCGTC GAAGTCCTCAAAGCACGGCAGGAACGGAAAGGTATCTTTGAAGCCGTCAA GAAAACACCACTTTAAGATACCACCCAGTGAACCGCTGAGGACTAATCCG CCGATTGTGAGAGAGCCGAATCTTGCTCCCATTGACGTGGATGCCACTGT TCCTCTGTCTGTCCCAAGGCCGTCGCCGTACAAGCCTCCGTTAAAGTCTG TACCGGCGCCTGTAATTCGGAAGCCCCCAAAGTCACAGCCGGTTTCCAGA GCGAAACCGCCTGTCACAAAGCGGCCAACTTGGAAGCAGCCGGTTTCGAA ACCAAGGGAAGTGGATGTGAAGAAGTTGTCCCCGTTCCGAAGTGTTCCGG CTGCGCCAAGGAGTGTACCGCCGAGCAAACCTGGTCTCCCGCCGAAAGGG GCCTTTTCGTGGGATCCGTTGGATGCAGAAGACTTGCGGTACTTACGGAA GGCATGGGAAGAGCGCAAGTCACGCCAAGCACGTCCACCACGCTCTCCGT TCACGTCTGTGCCAATCAGATCAAAACCAGTAGTCACTGCATCAAAGACG ATCAGACCTGGTACACCTACTCAAACAGATGAAGGTGTAAAGTCTTGGAA CGGCACGGAATCCGACGAGGTTGTGTTCGTTCCAAGGACTGAAGATGGCC TAGAGAATGGAGTGAACGGCGCTCATCCTTCTGAGCCGAAGAAGAAAAAG AAGCGCAAGCGTTTGGATGATGACGCCCGGGATGGGAAGAAAAAGAAAAA GAAGAAAAAGAAACGCAACAGGGACGAATTCGGTGAGGGAGATTCTAGCA GGACTGGTACAGATGGGGACGACAACCGGAAAGTTGGAAAATTCAAGATC TGTTTTAACGGACCGCTAGCTCATGTAGCTCGAAGTGAGTAG
back to top

Coding sequence (CDS) from alignment at ScGOVlb_88:2259219..2263610+

>Gvermi6777.t1 ID=Gvermi6777.t1|Name=Gvermi6777.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=CDS|length=4392bp|location=Sequence derived from alignment at ScGOVlb_88:2259219..2263610+ (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
ATGGTAACGTCCGCCAAGTCCGACAAGACAAGGCCCCCCTCCTTCCACCC
CGTCGAGCTTGCAAGGGGTTGGAGGATTCTTAACCAACACCTCACCCTTC
ATGTCGATGTCCGCAAGCGAACCCTCACCGGTTCGGCTCATTTCACTTTC
TGCGCCCTCAATATTCACTTTGTTAGCATTTGCCTCAACCTGCGTCGATG
TCGCGTCAATTCGTGCCAAATAGCCTCTAGCCCCGCCCCGTATCGTCTCG
TTTCTCCCTTGGACGATGACCAGTTGCTGGGCGCCGTTTCCTCGCCGACC
AGCAGGGCGCGAGTCGTCGATGTTGACCATAGCATGCGCCAACGCCAAAA
AGCTGCCTCCGAACAAGGAGAACTAGTCATTGACTTGCCGGTCAGCGTCA
CGGCTGACCTTATCGACGACCTCAAGCAACTCGTTGTCGACTCCAGTTCG
CACAATATCAAACCACAAGATATCGACTTGGAGTCACACCTTACTCCGTC
TGTCACCCTAGACAAGCTTCCCGTTGTCCACCTCAAGCTGGACTACCAAG
TACTAGACCCCAATGCCGGAGCCATGTTCTTCGGCAACCTTCACGCCGAA
AACGACGTCCTTGACCCGCTCTACATGCTCACTGAAAGTCGCTTTGGCAT
GGCTCGATTCTGGATGCCGTGTATAGACACTATAAATTGGTATGACCGCT
GCCTCTTCGACCTAGACGTCGTGGTTGATTCCCATTTGCTTGCTGTGGCA
TCAGGCGAACTCCACCAAACCGTTGCCTTGCCCTCCGAGGCATCGCCGTC
ACAGTCCCCAGCCAAGATGTACAAATACAGCCTCTATGCCCCGGCACTGG
CTTCCGAGATCATTCTCGCTGTTGGTCCCTTCATCCCCTTACCTGACCCT
ACCGTTCCTCACTCTATAACTCATTTCTGCCTTCCGGGCTACGCTAAAGA
GCTAGTTCACACCGCTCCTCCGTTGCTCGCTAAATCCCTCGCATTCTGTC
GCGATTACTTTGGAGCCGACCCTCCAATATGTTCATACAAACAGATTTTC
GTTGGGTCGCTCGGCCTAgacccaaacaccaccgtcactggagctggtgg
catagtcgtactttCCGGAGACTTGCTGCACACACCAAGATGTATTGATG
AAGCGTTTGCTGCCAGAGAAGCCATTATGAACGGTGTCGTCATGACGTAT
AGCGGAAGATTTCTCCGCCCACGCTTGCTTGAAGATGACTGGCTTATCAC
AGGGCTGGCAGCCCATGTTTCTGCGCTTGGTCTGCAGACCATCCTCGGCA
GAAACTGGTACACGTTCCGAATATGGGATATTATGGAGGAGCTAAGAAAC
AAACCATCTCTAGATCTTGCTGATTCCAATCTCGATCGAATTACTGACTC
CTCCCGTGCCATTATCCGCCAGCGCTCTCATATGATTGTTTACATGATCG
CCAAGAGAATTGGCGGTGATGTGTTGAAGCGAGCTTTGCGTGATATCGTT
GCCGAGGGTCGCAGTGCAACCATAGCGGCTGTCTCCAAGATTGACGCGAT
TTTGACAAGTATTGCGCAGTGCAATACTAACTCCAGTTCTGAAACACGAA
TGCCTTTCCATCGAAAGCTCACTGACATGATAAACGCTAACTTGAACTCC
AGTGAAAACCAGAGCGTTGTCACTAGTGGCTTTGATGATGCAATCCAAGG
CGTTGGCGTTGGACCGTTTTTGAAAAGGATACGTGGTATTATTGGCACTG
ACGTGCGAAACATGGTGCGGCAATGGGCGTCACATCCGGGAATTCCAAGG
ATTCAGGTTGCCTATCATTACAACGCGAGGAAACACACCATCGAACTCGC
TATCAAACAGGAAAGTATTGGCAATATATCTACCAATGGGAAAAAAGGAC
TTCGTTTCACAGGAACCATAAACATCAGGGTTATGGAAACAGAAGGGGAG
TACGATCACAGCGTTGAAATTTCAGACTCTGTTTTCATAGCGGAGATCCC
ATGTCATTCACGGCGTGCGAAACACAAGTCTGGTGCCCAAGCTGAAAAGG
AATTTAATGAAAACCCCGCACGGGCCTCGCCGATTCTTTGGATGAGGTTT
GACCCCGACCAGGAGTGGTGCATGGATGTCAACTTTAGACAAACAAAGAG
TGCCTGGATATCGGTACTGAACTCTGGAAGGGACGCAATGGGACAATTTG
AAGCCTGCAGAGGCCTTGCGGGTTCGGGCCATCAAGCGATCGTCAACAAG
CTGCTAACTGTTTTGAAGGACGAGCAAATTTACTGGAGAGTTCGCGCAGA
GGCGGCAAGAATTCTGAGCTCCACTGATGAAGGGTTGAAAACACTTATCT
CTTATTTCTGTTCCTGTTACACGGAGAAGTCGAAGGAGCAAAATGGGGTC
TTCTTGCCGCACAACTTTTCAAACTTCGCGAACTACTACGTGAAACGCGC
AATTCTTTCATCGATTGCCGAATCCCGAGTGAGGGGGTCCCGCACGGCGG
AAAGACCCCAAGGCTCGATCAGTCAGGACGCAGCCAAGTTCCTCGCATCT
GTGTTGGCAAGCCATGACAACGCTGGAAACGAATATGAGGACGACCACTT
CCTTGGCGACCTGCTCCAGTCCTGCGCAGCTGTGGCGATAAATTGTCTAG
GGGATCCCAGACACGCGTCAGGTGGGTACGATGGGCTGTCAACCACCGAG
TCTATCATGAAGCTTATGGAGAGGTTTCGGGCAATCGAGCACATGGTGCC
GAGGCGGTCTGGTCTCGTGAAATCCGCGCTTCTGAAAGCTGTTTCGGATA
TTGAAGTGTCTAAGCTCTCAAGACGGGACGTGATGGAGAAGGGGGCCGTT
GCGAAGGCCATAACAGAGTGTAAGTTTGTTCAAGACTCAAATTTGGTCAA
AGGCTTGTTCGAACTCTCTGGCCGGGATTGCTCCGTTGACTGTCGGTATG
CAGCAGCGTGCTGCCTCGCCAACATGTACGGAGGGGACTTAGAGGTCGTG
TTATGGATCCTCACCCGAGTGGACAGCGCAAGTTCAGGTGCCCGTCTAAG
TGACTTGTCCAAACTGTTTCGGGAAAAGCAAGAGGTTTCAGCGGACTACG
CTTTCACCGAAGCCCCAGTTTTGCGATACAAGCTCTTGGAGGTTCTGAAC
TCGGCTGCTAGGGTGAAGTCTTGGCATCGGTCCGTATCGCCGATCGTGTT
AGCGCTCCGAAGAAACACCAGGCGGGCGATGCAGGTTTGCATCCGGCTTC
AGAAGCTGATGGTTGCGGATGCAGATCCTAGAGTCCGGGCCTCAGCATTA
TCTTTTTCCAAGTTCGTCTGGGGGGCCGGAGTTCCCGTGTGCCTTCTTAC
AAACCGCGAGTATCGGGAAAAGCTCCGTATTACAGATCTTCGGGAGCCGA
CAAATTTGGTGCCTCTCAAAATGAACGCCAGCACCTTACCCCCGCAGCTG
ACCGAACCACGGAAGGAGTCAAGCAAGCAATCGAAGCCGCACAAATCGTC
GAAGTCCTCAAAGCACGGCAGGAACGGAAAGGTATCTTTGAAGCCGTCAA
GAAAACACCACTTTAAGATACCACCCAGTGAACCGCTGAGGACTAATCCG
CCGATTGTGAGAGAGCCGAATCTTGCTCCCATTGACGTGGATGCCACTGT
TCCTCTGTCTGTCCCAAGGCCGTCGCCGTACAAGCCTCCGTTAAAGTCTG
TACCGGCGCCTGTAATTCGGAAGCCCCCAAAGTCACAGCCGGTTTCCAGA
GCGAAACCGCCTGTCACAAAGCGGCCAACTTGGAAGCAGCCGGTTTCGAA
ACCAAGGGAAGTGGATGTGAAGAAGTTGTCCCCGTTCCGAAGTGTTCCGG
CTGCGCCAAGGAGTGTACCGCCGAGCAAACCTGGTCTCCCGCCGAAAGGG
GCCTTTTCGTGGGATCCGTTGGATGCAGAAGACTTGCGGTACTTACGGAA
GGCATGGGAAGAGCGCAAGTCACGCCAAGCACGTCCACCACGCTCTCCGT
TCACGTCTGTGCCAATCAGATCAAAACCAGTAGTCACTGCATCAAAGACG
ATCAGACCTGGTACACCTACTCAAACAGATGAAGGTGTAAAGTCTTGGAA
CGGCACGGAATCCGACGAGGTTGTGTTCGTTCCAAGGACTGAAGATGGCC
TAGAGAATGGAGTGAACGGCGCTCATCCTTCTGAGCCGAAGAAGAAAAAG
AAGCGCAAGCGTTTGGATGATGACGCCCGGGATGGGAAGAAAAAGAAAAA
GAAGAAAAAGAAACGCAACAGGGACGAATTCGGTGAGGGAGATTCTAGCA
GGACTGGTACAGATGGGGACGACAACCGGAAAGTTGGAAAATTCAAGATC
TGTTTTAACGGACCGCTAGCTCATGTAGCTCGAAGTGAGTAG
back to top