|
|
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Seed ortholog | 130081.XP_005709134.1 |
| PFAMs | Ank_2,Asparaginase,Pkinase,Pkinase_Tyr |
| Max annot lvl | 2759|Eukaryota |
| KEGG rclass | RC00010,RC02798 |
| KEGG ko | ko:K01424,ko:K13278 |
| KEGG Reaction | R00485 |
| KEGG Pathway | ko00250,ko00460,ko01100,ko01110,map00250,map00460,map01100,map01110 |
| Evalue | 2.67e-90 |
| EggNOG OGs | COG0252@1|root,COG0515@1|root,KOG0192@2759|Eukaryota,KOG0503@2759|Eukaryota |
| EC | 3.1.1.47,3.1.1.5,3.5.1.1 |
| Description | asparagine catabolic process |
| COG category | EJ |
| BRITE | ko00000,ko00001,ko01000 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following start_codon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following intron feature(s) are a part of this mRNA:
The following stop_codon feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Gvermi6710.t1 ID=Gvermi6710.t1|Name=Gvermi6710.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=mRNA|length=851bp MGNNFVKDAQPPPQRREYDESGARLLGLQNNLKHTEIDTLVDYYKRMDPD NEGLLPEQFREATGDFIATELTIDPKLVFNIFDKSKDEVQGRVTLREFIL GYAVLCRGTTENRLKYLFSIYDTAEDGKGCLSRDQLCSALQLMQRIASEV TDSVEHIEDDENENRIQDVADQIIADSSDPTNEGISYSDFIEQLKNDDNV TEWLEELKSVAGEHLKYIEKRELDLAELNMERNGLLRADAFSPSRGRVDW KPMPDASASTSRKRPRIPMPKKQKLVRRDLKATRWDLLRTNSRKDFADDQ ADEEANPALPFVINYDDIKFGKILGRGACATVYECQWMHVPVAVKVFKDG HGDAAGVDKLSTSVEESRKDVVGDYVEEFWLLLQIRHPNCLLYMGICFEP VVCIVTELYTGGSVANYLHGPNPRQFTPQKAVEMLCGVARGMYYLHASSP PILHRDLKTSNILINQSLTHCVICDFGLSRQFVQNASGVHLSTSGKPAKG GIVGTPYTMAPEVMELKPYTPAADVYSFGIVMYEMYTGRSPFAKKSPIQV MFHVVEGNRPSFYEEDRVPKILEDLIKKCWAADPSSRPSFEEILDILTSD TLAAELSQRQSVPARQQSRLEMQDELPDEDELSKRLLEAVYRGRTELVQQ LIDKGAKVNYSDYDKRTALHVAAAEGRTECMRLLISAGARLSFDRWNNSP LVDALNYANRSGDSEPIRLLRSIEGRTFGHTEGSGVLDSHHKESLLNQAA MIAAADGDVESMKRLLAGGLNVNCADYDRRTPLMVAASEGRRDIVTLLLE HGAAVDHRDRWGSTAIHEAERGGYHDILQLLTIKDSAEVRRTSPVAMSVS * back to topspliced messenger RNA >Gvermi6710.t1 ID=Gvermi6710.t1|Name=Gvermi6710.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=mRNA|length=2553bp|location=Sequence derived from alignment at ScGOVlb_88:2021382..2024138+ (Gracilaria vermiculophylla HapMaleFtJ_2017 male)|Notes=Excludes all bases but those of type(s): exon.
ATGGGCAACAACTTCGTCAAGGATGCCCAGCCGCCGCCGCAGCGCCGCGA GTACGACGAGAGTGGCGCCCGTCTGCTCGGTCTCCAGAACAACTTGAAGC ACACTGAAATTGACACCCTTGTGGATTACTACAAGCGCATGGATCCCGAC AATGAGGGCTTGCTTCCAGAACAGTTCAGAGAGGCCACCGGTGACTTCAT TGCCACCGAACTCACCATTGATCCCAAGCTTGTGTTTAACATTTTCGACA AATCGAAGGATGAAGTTCAGGGCCGTGTCACCCTGCGCGAGTTCATCCTC GGCTATGCGGTGCTCTGTCGCGGAACCACCGAGAACCGTCTCAAGTATTT GTTTTCCATATACGACACCGCTGAAGACGGCAAGGGCTGCCTCTCACGCG ATCAGCTGTGCAGCGCCCTCCAACTCATGCAGCGAATTGCGTCCGAAGTT ACGGATTCGGTCGAGCACATCGAAGACGACGAGAACGAAAACCGAATCCA AGACGTTGCCGACCAGATCATCGCCGATTCATCCGATCCCACCAACGAGG GAATTTCATACTCTGATTTTATAGAACAGCTCAAGAATGATGACAATGTC ACAGAGTGGCTGGAAGAGTTGAAGTCGGTTGCGGGCGAGCATTTAAAGTA CATTGAGAAGCGCGAGCTTGATCTCGCTGAGCTTAACATGGAAAGAAATG GCCTTCTTCGCGCCGACGCCTTTTCCCCCTCTCGCGGTCGTGTTGACTGG AAACCAATGCCAGATGCTTCTGCTTCAACCTCGCGAAAACGACCTCGCAT TCCCATGCCCAAGAAACAAAAGCTTGTCCGTCGCGACTTGAAAGCAACTC GATGGGACTTGCTGCGTACGAACAGTCGAAAGGACTTCGCTGATGACCAA GCTGACGAGGAGGCCAACCCTGCACTGCCTTTTGTTATCAATTATGATGA CATCAAGTTTGGTAAGATTCTCGGCAGGGGTGCTTGTGCAACTGTGTATG AATGCCAATGGATGCATGTGCCTGTCGCCGTCAAGGTTTTCAAGGACGGC CACGGTGATGCAGCTGGCGTGGACAAACTCTCTACTTCTGTCGAAGAGAG TCGGAAAGATGTCGTTGGCGACTACGTTGAGGAGTTCTGGCTTCTTTTGC AAATACGACACCCGAATTGTTTGCTTTACATGGGTATCTGTTTTGAACCT GTCGTCTGCATCGTTACAGAGTTGTACACTGGTGGTTCGGTAGCCAACTA TCTACATGGGCCGAACCCTCGTCAGTTTACTCCCCAGAAAGCCGTTGAAA TGCTTTGCGGCGTTGCTCGTGGCATGTATTATCTTCATGCCTCTTCACCA CCAATTTTGCATCGAGATTTGAAAACAAGTAACATTCTTATCAACCAATC TCTAACTCACTGCGTGATTTGCGACTTTGGGCTCAGCCGGCAGTTTGTTC AGAATGCCTCTGGGGTGCATCTCAGTACCTCTGGGAAGCCGGCCAAGGGG GGAATTGTTGGAACTCCGTACACCATGGCTCCGGAAGTCATGGAACTGAA ACCTTACACTCCGGCTGCGGACGTATATTCCTTTGGAATCGTCATGTATG AAATGTATACGGGCAGGTCTCCGTTTGCCAAAAAATCGCCCATTCAGGTC ATGTTCCATGTTGTCGAAGGAAACAGACCGTCGTTTTATGAGGAAGATCG AGTTCCGAAGATTCTTGAAGATCTCATTAAGAAGTGTTGGGCAGCTGATC CGAGCAGCAGACCAAGCTTTGAGGAAATCCTGGACATACTTACCAGCGAT ACTCTTGCAGCTGAACTTTCGCAGAGACAGTCAGTGCCGGCTAGACAACA GAGCCGCTTGGAAATGCAAGACGAACTGCCAGATGAAGATGAGCTTTCCA AACGACTCCTTGAAGCCGTGTACAGAGGGCGTACGGAGTTGGTTCAGCAG TTGATTGATAAGGGCGCAAAGGTGAATTATTCCGATTACGACAAACGAAC CGCTCTACATGTTGCCGCTGCAGAAGGACGTACAGAATGTATGAGACTGT TGATCTCAGCTGGTGCAAGATTGTCCTTTGACAGATGGAACAATTCACCT CTTGTCGATGCCTTAAACTATGCCAATCGATCCGGTGACAGTGAGCCCAT ACGGTTGCTGAGATCTATAGAGGGCAGAACTTTCGGCCACACTGAAGGTT CCGGCGTGCTCGATTCTCACCACAAAGAGAGTTTGCTGAACCAAGCAGCC ATGATTGCAGCCGCAGATGGTGATGTTGAAAGCATGAAAAGGCTCCTTGC CGGCGGGTTAAATGTGAATTGTGCTGATTACGACCGCCGGACTCCATTAA TGGTGGCTGCATCCGAGGGGCGTCGAGATATTGTTACATTGCTGCTCGAA CACGGTGCAGCTGTGGATCATCGCGATAGGTGGGGTTCAACAGCAATACA TGAAGCGGAGAGAGGCGGATACCACGACATTCTGCAACTTCTCACAATCA AAGATTCAGCGGAGGTTCGTAGAACATCACCTGTCGCCATGAGCGTGTCC TGA back to topprotein sequence of Gvermi6710.t1 >Gvermi6710.t1 ID=Gvermi6710.t1|Name=Gvermi6710.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=851bp
MGNNFVKDAQPPPQRREYDESGARLLGLQNNLKHTEIDTLVDYYKRMDPD NEGLLPEQFREATGDFIATELTIDPKLVFNIFDKSKDEVQGRVTLREFIL GYAVLCRGTTENRLKYLFSIYDTAEDGKGCLSRDQLCSALQLMQRIASEV TDSVEHIEDDENENRIQDVADQIIADSSDPTNEGISYSDFIEQLKNDDNV TEWLEELKSVAGEHLKYIEKRELDLAELNMERNGLLRADAFSPSRGRVDW KPMPDASASTSRKRPRIPMPKKQKLVRRDLKATRWDLLRTNSRKDFADDQ ADEEANPALPFVINYDDIKFGKILGRGACATVYECQWMHVPVAVKVFKDG HGDAAGVDKLSTSVEESRKDVVGDYVEEFWLLLQIRHPNCLLYMGICFEP VVCIVTELYTGGSVANYLHGPNPRQFTPQKAVEMLCGVARGMYYLHASSP PILHRDLKTSNILINQSLTHCVICDFGLSRQFVQNASGVHLSTSGKPAKG GIVGTPYTMAPEVMELKPYTPAADVYSFGIVMYEMYTGRSPFAKKSPIQV MFHVVEGNRPSFYEEDRVPKILEDLIKKCWAADPSSRPSFEEILDILTSD TLAAELSQRQSVPARQQSRLEMQDELPDEDELSKRLLEAVYRGRTELVQQ LIDKGAKVNYSDYDKRTALHVAAAEGRTECMRLLISAGARLSFDRWNNSP LVDALNYANRSGDSEPIRLLRSIEGRTFGHTEGSGVLDSHHKESLLNQAA MIAAADGDVESMKRLLAGGLNVNCADYDRRTPLMVAASEGRRDIVTLLLE HGAAVDHRDRWGSTAIHEAERGGYHDILQLLTIKDSAEVRRTSPVAMSVS * back to topmRNA from alignment at ScGOVlb_88:2021382..2024138+ Legend: polypeptidestart_codonCDSexonintronstop_codon Hold the cursor over a type above to highlight its positions in the sequence below. >Gvermi6710.t1 ID=Gvermi6710.t1|Name=Gvermi6710.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=mRNA|length=2757bp|location=Sequence derived from alignment at ScGOVlb_88:2021382..2024138+ (Gracilaria vermiculophylla HapMaleFtJ_2017 male) ATGGGCAACAACTTCGTCAAGGATGCCCAGCCGCCGCCGCAGCGCCGCGA
GTACGACGAGAGTGGCGCCCGTCTGCTCGGTCTCCAGAACAACTTGAAGC
ACACTGAAATTGACACCCTTGTGGATTACTACAAGCGCATGGATCCCGAC
AATGAGGGCTTGCTTCCAGAACAGTTCAGAGAGGCCACCGGTGACTTCAT
TGCCACCGAACTCACCATTGATCCCAAGCTTGTGTTTAACATTTTCGACA
AATCGAAGGATGAAGTTCAGGGCCGTGTCACCCTGCGCGAGTTCATCCTC
GGCTATGCGGTGCTCTGTCGCGGAACCACCGAGAACCGTCTCAAGTATTT
GTTTTCCATATACGACACCGCTGAAGACGGCAAGGGCTGCCTCTCACGCG
ATCAGCTGTGCAGCGCCCTCCAACTCATGCAGCGAATTGCGTCCGAAGTT
ACGGATTCGGTCGAGCACATCGAAGACGACGAGAACGAAAACCGAATCCA
AGACGTTGCCGACCAGATCATCGCCGATTCATCCGATCCCACCAACGAGG
GAATTTCATACTCTGATTTTATAGAACAGCTCAAGAATGATGACAATGTC
ACAGAGTGGCTGGAAGAGTTGAAGTCGGTTGCGGGCGAGCATTTAAAGTA
CATTGAGAAGCGCGAGCTTGATCTCGCTGAGCTTAACATGGAAAGAAATG
GCCTTCTTCGCGCCGACGCCTTTTCCCCCTCTCGCGGTCGTGTTGACTGG
AAACCAATGCCAGATGCTTCTGCTTCAACCTCGCGAAAACGACCTCGCAT
TCCCATGCCCAAGAAACAAAAGCTTGTCCGTCGCGACTTGAAAGCAACTC
GATGGGACTTGCTGCGTACGAACAGTCGAAAGGACTTCGCTGATGACCAA
GCTGACGAGGAGGCCAACCCTGCACTGCCTTTTGTTATCAATTATGATGA
CATCAAGTTTGGTAAGATTCTCGGCAGGGGTGCTTGTGCAACTGTGTATG
AATGCCAATGGATGCATGTGCCTGTCGCCGTCAAGGTTTTCAAGGACGGC
CACGGTGATGCAGCTGGCGTGGACAAACTCTCTACTTCTGTCGAAGAGAG
TCGGAAAGATGTCGTTGGCGACTACGTTGAGGAGTTCTGGCTTCTTTTGC
AAATACGACACCCGAATTGTTTGCTTTACATGGGTATCTGTTTTGAACCT
GTCGTCTGCATCGTTACAGAGTTGTACACTGGTGGTTCGGTAGCCAACTA
TCTACATGGGCCGAACCCTCGTCAGTTTACTCCCCAGAAAGCCGTTGAAA
TGCTTTGCGGCGTTGCTCGTGGCATGTATTATCTTCATGCCTCTTCACCA
CCAATTTTGCATCGAGATTTGAAAACAAGTAACATTCTTATCAACCAATC
TCTAACTCACTGCGTGATTTGCGACTTTGGGCTCAGCCGGCAGTTTGTTC
AGAATGCCTCTGGGGTGCATCTCAGTACCTCTGGGAAGCCGGCCAAGGGG
GGAATTGTTGGAACTCCGTACACCATGGCTCCGGAAGTCATGGAACTGAA
ACCTTACACTCCGGCTGCGGACGTATATTCCTTTGGAATCGTCATGTATG
AAATGTATACGGGCAGGTCTCCGTTTGCCAAAAAATCGCCCATTCAGGTC
ATGTTCCATGTTGTCGAAGGAAACAGACCGTCGTTTTATGAGGAAGATCG
AGTTCCGAAGATTCTTGAAGATCTCATTAAGAAGTGTTGGGCAGCTGATC
CGAGCAGCAGACCAAGCTTTGAGGAAATCCTGGACATACTTACCAGCGAT
ACTCTTGCAGCTGAACTTTCGCAGAGACAGTCAGTGCCGGCTAGACAACA
GAGCCGCTTGGAAATGCAAGACGAACTGCCAGATGAAGATGAGCTTTCCA
AACGACTCCTTGAAGCCGTGTACAGAGGGCGTACGGAGTTGGTTCAGCAG
TTGATTGATAAGGGCGCAAAGGTGAATTATTCCGATTACGACAAACGAAC
CGCTCTACATGTTGGTAAGTTCTAGATGCATATTTGGTATGTGAAGATTC
AACCAGACGAAAATCCGACTAACACCCTGTTATTCTACATTCTTACTGTA
TTGTTTTGTTCGGAAAGCCGCTGCAGAAGGACGTACAGAATGTATGAGAC
TGTTGATCTCAGCTGGTGCAAGATTGTCCTTTGACAGATGGAACAATTCA
CCTCTTGTCGATGCCTTAAACTATGCCAATCGATCCGGTGACAGTGAGCC
CATACGGTTGCTGAGATCTATAGAGGGCAGAACTTTCGGCCACACTGAAG
GTTCCGGCGTGCTCGATTCTCACCACAAAGAGAGTTTGCTGAACCAAGCA
GCCATGATTGCAGCCGCAGATGGTGATGTTGAAAGCATGAAAAGGCTCCT
TGCCGGCGGGTTAAATGTGAATTGTGCTGATTACGACCGCCGGACTCCAT
TAATGGTAAGTTACCCGACTGAAATGTTTTGTTTGAGGAATCAACCCAAG
TCTCCACGGTTTTTATTGTCGTGCTCTAACAGAATTCAATGTTCTCTATT
ACGCAGGTGGCTGCATCCGAGGGGCGTCGAGATATTGTTACATTGCTGCT
CGAACACGGTGCAGCTGTGGATCATCGCGATAGGTGGGGTTCAACAGCAA
TACATGAAGCGGAGAGAGGCGGATACCACGACATTCTGCAACTTCTCACA
ATCAAAGATTCAGCGGAGGTTCGTAGAACATCACCTGTCGCCATGAGCGT
GTCCTGA back to topCoding sequence (CDS) from alignment at ScGOVlb_88:2021382..2024138+ >Gvermi6710.t1 ID=Gvermi6710.t1|Name=Gvermi6710.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=CDS|length=2553bp|location=Sequence derived from alignment at ScGOVlb_88:2021382..2024138+ (Gracilaria vermiculophylla HapMaleFtJ_2017 male) ATGGGCAACAACTTCGTCAAGGATGCCCAGCCGCCGCCGCAGCGCCGCGA GTACGACGAGAGTGGCGCCCGTCTGCTCGGTCTCCAGAACAACTTGAAGC ACACTGAAATTGACACCCTTGTGGATTACTACAAGCGCATGGATCCCGAC AATGAGGGCTTGCTTCCAGAACAGTTCAGAGAGGCCACCGGTGACTTCAT TGCCACCGAACTCACCATTGATCCCAAGCTTGTGTTTAACATTTTCGACA AATCGAAGGATGAAGTTCAGGGCCGTGTCACCCTGCGCGAGTTCATCCTC GGCTATGCGGTGCTCTGTCGCGGAACCACCGAGAACCGTCTCAAGTATTT GTTTTCCATATACGACACCGCTGAAGACGGCAAGGGCTGCCTCTCACGCG ATCAGCTGTGCAGCGCCCTCCAACTCATGCAGCGAATTGCGTCCGAAGTT ACGGATTCGGTCGAGCACATCGAAGACGACGAGAACGAAAACCGAATCCA AGACGTTGCCGACCAGATCATCGCCGATTCATCCGATCCCACCAACGAGG GAATTTCATACTCTGATTTTATAGAACAGCTCAAGAATGATGACAATGTC ACAGAGTGGCTGGAAGAGTTGAAGTCGGTTGCGGGCGAGCATTTAAAGTA CATTGAGAAGCGCGAGCTTGATCTCGCTGAGCTTAACATGGAAAGAAATG GCCTTCTTCGCGCCGACGCCTTTTCCCCCTCTCGCGGTCGTGTTGACTGG AAACCAATGCCAGATGCTTCTGCTTCAACCTCGCGAAAACGACCTCGCAT TCCCATGCCCAAGAAACAAAAGCTTGTCCGTCGCGACTTGAAAGCAACTC GATGGGACTTGCTGCGTACGAACAGTCGAAAGGACTTCGCTGATGACCAA GCTGACGAGGAGGCCAACCCTGCACTGCCTTTTGTTATCAATTATGATGA CATCAAGTTTGGTAAGATTCTCGGCAGGGGTGCTTGTGCAACTGTGTATG AATGCCAATGGATGCATGTGCCTGTCGCCGTCAAGGTTTTCAAGGACGGC CACGGTGATGCAGCTGGCGTGGACAAACTCTCTACTTCTGTCGAAGAGAG TCGGAAAGATGTCGTTGGCGACTACGTTGAGGAGTTCTGGCTTCTTTTGC AAATACGACACCCGAATTGTTTGCTTTACATGGGTATCTGTTTTGAACCT GTCGTCTGCATCGTTACAGAGTTGTACACTGGTGGTTCGGTAGCCAACTA TCTACATGGGCCGAACCCTCGTCAGTTTACTCCCCAGAAAGCCGTTGAAA TGCTTTGCGGCGTTGCTCGTGGCATGTATTATCTTCATGCCTCTTCACCA CCAATTTTGCATCGAGATTTGAAAACAAGTAACATTCTTATCAACCAATC TCTAACTCACTGCGTGATTTGCGACTTTGGGCTCAGCCGGCAGTTTGTTC AGAATGCCTCTGGGGTGCATCTCAGTACCTCTGGGAAGCCGGCCAAGGGG GGAATTGTTGGAACTCCGTACACCATGGCTCCGGAAGTCATGGAACTGAA ACCTTACACTCCGGCTGCGGACGTATATTCCTTTGGAATCGTCATGTATG AAATGTATACGGGCAGGTCTCCGTTTGCCAAAAAATCGCCCATTCAGGTC ATGTTCCATGTTGTCGAAGGAAACAGACCGTCGTTTTATGAGGAAGATCG AGTTCCGAAGATTCTTGAAGATCTCATTAAGAAGTGTTGGGCAGCTGATC CGAGCAGCAGACCAAGCTTTGAGGAAATCCTGGACATACTTACCAGCGAT ACTCTTGCAGCTGAACTTTCGCAGAGACAGTCAGTGCCGGCTAGACAACA GAGCCGCTTGGAAATGCAAGACGAACTGCCAGATGAAGATGAGCTTTCCA AACGACTCCTTGAAGCCGTGTACAGAGGGCGTACGGAGTTGGTTCAGCAG TTGATTGATAAGGGCGCAAAGGTGAATTATTCCGATTACGACAAACGAAC CGCTCTACATGTTGCCGCTGCAGAAGGACGTACAGAATGTATGAGACTGT TGATCTCAGCTGGTGCAAGATTGTCCTTTGACAGATGGAACAATTCACCT CTTGTCGATGCCTTAAACTATGCCAATCGATCCGGTGACAGTGAGCCCAT ACGGTTGCTGAGATCTATAGAGGGCAGAACTTTCGGCCACACTGAAGGTT CCGGCGTGCTCGATTCTCACCACAAAGAGAGTTTGCTGAACCAAGCAGCC ATGATTGCAGCCGCAGATGGTGATGTTGAAAGCATGAAAAGGCTCCTTGC CGGCGGGTTAAATGTGAATTGTGCTGATTACGACCGCCGGACTCCATTAA TGGTGGCTGCATCCGAGGGGCGTCGAGATATTGTTACATTGCTGCTCGAA CACGGTGCAGCTGTGGATCATCGCGATAGGTGGGGTTCAACAGCAATACA TGAAGCGGAGAGAGGCGGATACCACGACATTCTGCAACTTCTCACAATCA AAGATTCAGCGGAGGTTCGTAGAACATCACCTGTCGCCATGAGCGTGTCC TGA back to top
|