Gvermi3280.t1 (mRNA) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	Gvermi3280.t1
Unique Name	Gvermi3280.t1
Type	mRNA
Organism	Gracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length	452

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
ScGOVlb_41	contig	ScGOVlb_41:905924..907279 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.0	2022-05-09

Properties


Property Name	Value
Seed ortholog	45157.CMK131CT
Preferred name	ENOL
PFAMs	Enolase_C,Enolase_N
Max annot lvl	2759\|Eukaryota
KEGG rclass	RC00349
KEGG ko	ko:K01689
KEGG Reaction	R00658
KEGG Pathway	ko00010,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko03018,ko04066,map00010,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map03018,map04066
KEGG Module	M00001,M00002,M00003,M00346,M00394
GOs	GO:0003674,GO:0003824,GO:0004634,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005975,GO:0005996,GO:0006006,GO:0006007,GO:0006082,GO:0006090,GO:0006091,GO:0006094,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006734,GO:0006735,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009435,GO:0009987,GO:0016020,GO:0016051,GO:0016052,GO:0016053,GO:0016310,GO:0016829,GO:0016835,GO:0016836,GO:0017144,GO:0018130,GO:0019318,GO:0019319,GO:0019320,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019637,GO:0019674,GO:0019693,GO:0019752,GO:0032787,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042866,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044282,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046031,GO:0046034,GO:0046364,GO:0046365,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046939,GO:0051186,GO:0051188,GO:0055086,GO:0055114,GO:0061615,GO:0061620,GO:0061621,GO:0061718,GO:0071704,GO:0071944,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576
Evalue	8.91e-179
EggNOG OGs	COG0148@1\|root,KOG2670@2759\|Eukaryota
EC	4.2.1.11
Description	phosphopyruvate hydratase activity
COG category	G
BRITE	ko00000,ko00001,ko00002,ko01000,ko03019,ko04147

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
Gvermi3280	Gvermi3280	Gracilaria vermiculophylla HapMaleFtJ_2017 male	gene	ScGOVlb_41 905924..907279 -

The following stop_codon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Gvermi3280.t1.stop1	Gvermi3280.t1.stop1	Gracilaria vermiculophylla HapMaleFtJ_2017 male	stop_codon	ScGOVlb_41 905924..905926 -

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Gvermi3280.t1.CDS1	Gvermi3280.t1.CDS1	Gracilaria vermiculophylla HapMaleFtJ_2017 male	CDS	ScGOVlb_41 905924..907279 -

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Gvermi3280.t1.exon1	Gvermi3280.t1.exon1	Gracilaria vermiculophylla HapMaleFtJ_2017 male	exon	ScGOVlb_41 905924..907279 -

The following start_codon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Gvermi3280.t1.start1	Gvermi3280.t1.start1	Gracilaria vermiculophylla HapMaleFtJ_2017 male	start_codon	ScGOVlb_41 907277..907279 -

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
Gvermi3280.t1	Gvermi3280.t1	Gracilaria vermiculophylla HapMaleFtJ_2017 male	polypeptide	ScGOVlb_41 905924..907279 -

Sequences

The following sequences are available for this feature:

mRNA sequence
mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at ScGOVlb_41:905924..907279-
coding sequence from alignment at ScGOVlb_41:905924..907279-

mRNA sequence

>Gvermi3280.t1 ID=Gvermi3280.t1|Name=Gvermi3280.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=mRNA|length=452bp
MSRIKDVRGRQLFDSLGNPTLEVEVETDDGCFRAIVPAGSSEGANEAHEL
RDGDASVFGGKGVSKAIKNVNNELAVAVIGMDPTDQEGIDQALIDCDGSD
DGTKRRLGANAILGVSMAVSRAGAAKKDIPLYKHLNNLAGNPNIILPVPC
FNVLSGGSRASNGLSFQEFIVMPTGADSFKQAMRIGVEVYHKLKQMVAEQ
YGQGSTTVDEEGGFAPDMDDNDEAFKLLKAAIKESGFEELVQIGVDVAAN
DFYDKPSGKYDLNFKQTEKESSAEKMKSGDDLLQMYKVYAANYGVVSIED
PFHKDDLESYSKMTGELGELIQIMGDEFFTTNLERLENAIEQNTCNALLL
KLNQIGTVTEAIEANNLARNAGFGVMISHRAGDTEDPFIAALCAGLGTGQ
IKSGAPCRSERLAKYNELIRIEEDLGDSAAFAGDYWRDPWMMENTRNPAY
M*

spliced messenger RNA

>Gvermi3280.t1 ID=Gvermi3280.t1|Name=Gvermi3280.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=mRNA|length=1356bp|location=Sequence derived from alignment at ScGOVlb_41:905924..907279- (Gracilaria vermiculophylla HapMaleFtJ_2017 male)|Notes=Excludes all bases but those of type(s): exon.  
ATGTCTCGAATCAAAGATGTACGGGGTCGCCAACTTTTTGACTCCCTGGG
CAATCCCACCCTTGAGGTTGAGGTAGAGACAGATGACGGCTGTTTCCGCG
CCATAGTGCCGGCCGGTTCCTCTGAAGGTGCCAACGAAGCACATGAGTTA
AGAGACGGTGATGCGAGCGTATTCGGCGGAAAGGGGGTATCCAAAGCGAT
CAAGAACGTCAACAATGAGCTCGCTGTAGCCGTTATTGGAATGGATCCAA
CGGATCAAGAAGGGATAGATCAGGCCCTAATTGATTGTGACGGCAGTGAC
GATGGCACCAAACGTCGTCTAGGTGCCAACGCAATCCTTGGTGTTTCAAT
GGCCGTTTCTCGCGCTGGAGCTGCAAAGAAGGATATACCTTTGTACAAAC
ATCTTAACAACCTTGCTGGAAATCCCAACATCATTTTGCCGGTTCCTTGT
TTTAATGTTTTGAGTGGTGGATCGCGTGCTAGCAACGGTCTTAGCTTCCA
AGAGTTTATTGTCATGCCTACGGGTGCAGATTCATTCAAACAGGCCATGA
GGATCGGCGTAGAAGTCTACCACAAATTGAAGCAAATGGTGGCTGAGCAA
TATGGACAGGGGTCCACCACCGTAGATGAAGAAGGGGGATTCGCTCCTGA
TATGGATGACAACGACGAAGCTTTCAAATTGCTGAAGGCAGCCATTAAGG
AATCAGGATTTGAGGAACTTGTTCAAATCGGAGTCGATGTCGCGGCAAAT
GACTTTTATGACAAACCATCGGGGAAATACGACCTTAATTTCAAGCAAAC
GGAAAAAGAAAGTTCCGCAGAGAAAATGAAATCCGGGGACGATCTATTAC
AAATGTACAAGGTGTATGCTGCTAACTATGGGGTGGTTTCCATCGAAGAT
CCTTTCCACAAGGACGATTTGGAGTCCTATTCGAAAATGACCGGCGAGTT
GGGTGAGCTTATCCAAATCATGGGTGATGAATTCTTTACGACTAATCTAG
AGAGGCTTGAAAACGCAATCGAACAAAATACATGTAATGCTCTACTCTTG
AAACTAAACCAAATTGGGACCGTCACAGAGGCAATCGAGGCAAATAATCT
TGCTCGCAATGCAGGTTTTGGAGTGATGATTAGTCATCGCGCCGGGGATA
CGGAAGATCCATTTATTGCGGCGCTTTGCGCGGGACTAGGTACTGGTCAG
ATAAAATCAGGAGCTCCTTGCCGTTCCGAAAGGCTGGCCAAGTATAATGA
GCTCATTCGCATTGAAGAGGATTTGGGGGACAGTGCTGCATTCGCTGGGG
ATTATTGGAGGGACCCATGGATGATGGAAAATACCCGAAACCCGGCGTAT
ATGTGA

protein sequence of Gvermi3280.t1

>Gvermi3280.t1 ID=Gvermi3280.t1|Name=Gvermi3280.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=452bp
MSRIKDVRGRQLFDSLGNPTLEVEVETDDGCFRAIVPAGSSEGANEAHEL
RDGDASVFGGKGVSKAIKNVNNELAVAVIGMDPTDQEGIDQALIDCDGSD
DGTKRRLGANAILGVSMAVSRAGAAKKDIPLYKHLNNLAGNPNIILPVPC
FNVLSGGSRASNGLSFQEFIVMPTGADSFKQAMRIGVEVYHKLKQMVAEQ
YGQGSTTVDEEGGFAPDMDDNDEAFKLLKAAIKESGFEELVQIGVDVAAN
DFYDKPSGKYDLNFKQTEKESSAEKMKSGDDLLQMYKVYAANYGVVSIED
PFHKDDLESYSKMTGELGELIQIMGDEFFTTNLERLENAIEQNTCNALLL
KLNQIGTVTEAIEANNLARNAGFGVMISHRAGDTEDPFIAALCAGLGTGQ
IKSGAPCRSERLAKYNELIRIEEDLGDSAAFAGDYWRDPWMMENTRNPAY
M*

mRNA from alignment at ScGOVlb_41:905924..907279-

Legend: polypeptideCDSexonstart_codonstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

>Gvermi3280.t1 ID=Gvermi3280.t1|Name=Gvermi3280.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=mRNA|length=1356bp|location=Sequence derived from alignment at ScGOVlb_41:905924..907279- (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
ATGTCTCGAATCAAAGATGTACGGGGTCGCCAACTTTTTGACTCCCTGGG
CAATCCCACCCTTGAGGTTGAGGTAGAGACAGATGACGGCTGTTTCCGCG
CCATAGTGCCGGCCGGTTCCTCTGAAGGTGCCAACGAAGCACATGAGTTA
AGAGACGGTGATGCGAGCGTATTCGGCGGAAAGGGGGTATCCAAAGCGAT
CAAGAACGTCAACAATGAGCTCGCTGTAGCCGTTATTGGAATGGATCCAA
CGGATCAAGAAGGGATAGATCAGGCCCTAATTGATTGTGACGGCAGTGAC
GATGGCACCAAACGTCGTCTAGGTGCCAACGCAATCCTTGGTGTTTCAAT
GGCCGTTTCTCGCGCTGGAGCTGCAAAGAAGGATATACCTTTGTACAAAC
ATCTTAACAACCTTGCTGGAAATCCCAACATCATTTTGCCGGTTCCTTGT
TTTAATGTTTTGAGTGGTGGATCGCGTGCTAGCAACGGTCTTAGCTTCCA
AGAGTTTATTGTCATGCCTACGGGTGCAGATTCATTCAAACAGGCCATGA
GGATCGGCGTAGAAGTCTACCACAAATTGAAGCAAATGGTGGCTGAGCAA
TATGGACAGGGGTCCACCACCGTAGATGAAGAAGGGGGATTCGCTCCTGA
TATGGATGACAACGACGAAGCTTTCAAATTGCTGAAGGCAGCCATTAAGG
AATCAGGATTTGAGGAACTTGTTCAAATCGGAGTCGATGTCGCGGCAAAT
GACTTTTATGACAAACCATCGGGGAAATACGACCTTAATTTCAAGCAAAC
GGAAAAAGAAAGTTCCGCAGAGAAAATGAAATCCGGGGACGATCTATTAC
AAATGTACAAGGTGTATGCTGCTAACTATGGGGTGGTTTCCATCGAAGAT
CCTTTCCACAAGGACGATTTGGAGTCCTATTCGAAAATGACCGGCGAGTT
GGGTGAGCTTATCCAAATCATGGGTGATGAATTCTTTACGACTAATCTAG
AGAGGCTTGAAAACGCAATCGAACAAAATACATGTAATGCTCTACTCTTG
AAACTAAACCAAATTGGGACCGTCACAGAGGCAATCGAGGCAAATAATCT
TGCTCGCAATGCAGGTTTTGGAGTGATGATTAGTCATCGCGCCGGGGATA
CGGAAGATCCATTTATTGCGGCGCTTTGCGCGGGACTAGGTACTGGTCAG
ATAAAATCAGGAGCTCCTTGCCGTTCCGAAAGGCTGGCCAAGTATAATGA
GCTCATTCGCATTGAAGAGGATTTGGGGGACAGTGCTGCATTCGCTGGGG
ATTATTGGAGGGACCCATGGATGATGGAAAATACCCGAAACCCGGCGTAT
ATGTGA

Coding sequence (CDS) from alignment at ScGOVlb_41:905924..907279-

>Gvermi3280.t1 ID=Gvermi3280.t1|Name=Gvermi3280.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=CDS|length=1356bp|location=Sequence derived from alignment at ScGOVlb_41:905924..907279- (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
ATGTCTCGAATCAAAGATGTACGGGGTCGCCAACTTTTTGACTCCCTGGG
CAATCCCACCCTTGAGGTTGAGGTAGAGACAGATGACGGCTGTTTCCGCG
CCATAGTGCCGGCCGGTTCCTCTGAAGGTGCCAACGAAGCACATGAGTTA
AGAGACGGTGATGCGAGCGTATTCGGCGGAAAGGGGGTATCCAAAGCGAT
CAAGAACGTCAACAATGAGCTCGCTGTAGCCGTTATTGGAATGGATCCAA
CGGATCAAGAAGGGATAGATCAGGCCCTAATTGATTGTGACGGCAGTGAC
GATGGCACCAAACGTCGTCTAGGTGCCAACGCAATCCTTGGTGTTTCAAT
GGCCGTTTCTCGCGCTGGAGCTGCAAAGAAGGATATACCTTTGTACAAAC
ATCTTAACAACCTTGCTGGAAATCCCAACATCATTTTGCCGGTTCCTTGT
TTTAATGTTTTGAGTGGTGGATCGCGTGCTAGCAACGGTCTTAGCTTCCA
AGAGTTTATTGTCATGCCTACGGGTGCAGATTCATTCAAACAGGCCATGA
GGATCGGCGTAGAAGTCTACCACAAATTGAAGCAAATGGTGGCTGAGCAA
TATGGACAGGGGTCCACCACCGTAGATGAAGAAGGGGGATTCGCTCCTGA
TATGGATGACAACGACGAAGCTTTCAAATTGCTGAAGGCAGCCATTAAGG
AATCAGGATTTGAGGAACTTGTTCAAATCGGAGTCGATGTCGCGGCAAAT
GACTTTTATGACAAACCATCGGGGAAATACGACCTTAATTTCAAGCAAAC
GGAAAAAGAAAGTTCCGCAGAGAAAATGAAATCCGGGGACGATCTATTAC
AAATGTACAAGGTGTATGCTGCTAACTATGGGGTGGTTTCCATCGAAGAT
CCTTTCCACAAGGACGATTTGGAGTCCTATTCGAAAATGACCGGCGAGTT
GGGTGAGCTTATCCAAATCATGGGTGATGAATTCTTTACGACTAATCTAG
AGAGGCTTGAAAACGCAATCGAACAAAATACATGTAATGCTCTACTCTTG
AAACTAAACCAAATTGGGACCGTCACAGAGGCAATCGAGGCAAATAATCT
TGCTCGCAATGCAGGTTTTGGAGTGATGATTAGTCATCGCGCCGGGGATA
CGGAAGATCCATTTATTGCGGCGCTTTGCGCGGGACTAGGTACTGGTCAG
ATAAAATCAGGAGCTCCTTGCCGTTCCGAAAGGCTGGCCAAGTATAATGA
GCTCATTCGCATTGAAGAGGATTTGGGGGACAGTGCTGCATTCGCTGGGG
ATTATTGGAGGGACCCATGGATGATGGAAAATACCCGAAACCCGGCGTAT
ATGTGA