Gvermi3280.t1 (mRNA) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGvermi3280.t1
Unique NameGvermi3280.t1
TypemRNA
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length452
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_41contigScGOVlb_41:905924..907279 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Properties
Property NameValue
Seed ortholog45157.CMK131CT
Preferred nameENOL
PFAMsEnolase_C,Enolase_N
Max annot lvl2759|Eukaryota
KEGG rclassRC00349
KEGG koko:K01689
KEGG ReactionR00658
KEGG Pathwayko00010,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko03018,ko04066,map00010,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map03018,map04066
KEGG ModuleM00001,M00002,M00003,M00346,M00394
GOsGO:0003674,GO:0003824,GO:0004634,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005975,GO:0005996,GO:0006006,GO:0006007,GO:0006082,GO:0006090,GO:0006091,GO:0006094,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006734,GO:0006735,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009435,GO:0009987,GO:0016020,GO:0016051,GO:0016052,GO:0016053,GO:0016310,GO:0016829,GO:0016835,GO:0016836,GO:0017144,GO:0018130,GO:0019318,GO:0019319,GO:0019320,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019637,GO:0019674,GO:0019693,GO:0019752,GO:0032787,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042866,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044282,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046031,GO:0046034,GO:0046364,GO:0046365,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046939,GO:0051186,GO:0051188,GO:0055086,GO:0055114,GO:0061615,GO:0061620,GO:0061621,GO:0061718,GO:0071704,GO:0071944,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576
Evalue8.91e-179
EggNOG OGsCOG0148@1|root,KOG2670@2759|Eukaryota
EC4.2.1.11
Descriptionphosphopyruvate hydratase activity
COG categoryG
BRITEko00000,ko00001,ko00002,ko01000,ko03019,ko04147
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi3280Gvermi3280Gracilaria vermiculophylla HapMaleFtJ_2017 malegeneScGOVlb_41 905924..907279 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gvermi3280.t1.stop1Gvermi3280.t1.stop1Gracilaria vermiculophylla HapMaleFtJ_2017 malestop_codonScGOVlb_41 905924..905926 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gvermi3280.t1.CDS1Gvermi3280.t1.CDS1Gracilaria vermiculophylla HapMaleFtJ_2017 maleCDSScGOVlb_41 905924..907279 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gvermi3280.t1.exon1Gvermi3280.t1.exon1Gracilaria vermiculophylla HapMaleFtJ_2017 maleexonScGOVlb_41 905924..907279 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gvermi3280.t1.start1Gvermi3280.t1.start1Gracilaria vermiculophylla HapMaleFtJ_2017 malestart_codonScGOVlb_41 907277..907279 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gvermi3280.t1Gvermi3280.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malepolypeptideScGOVlb_41 905924..907279 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Gvermi3280.t1 ID=Gvermi3280.t1|Name=Gvermi3280.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=mRNA|length=452bp
MSRIKDVRGRQLFDSLGNPTLEVEVETDDGCFRAIVPAGSSEGANEAHEL
RDGDASVFGGKGVSKAIKNVNNELAVAVIGMDPTDQEGIDQALIDCDGSD
DGTKRRLGANAILGVSMAVSRAGAAKKDIPLYKHLNNLAGNPNIILPVPC
FNVLSGGSRASNGLSFQEFIVMPTGADSFKQAMRIGVEVYHKLKQMVAEQ
YGQGSTTVDEEGGFAPDMDDNDEAFKLLKAAIKESGFEELVQIGVDVAAN
DFYDKPSGKYDLNFKQTEKESSAEKMKSGDDLLQMYKVYAANYGVVSIED
PFHKDDLESYSKMTGELGELIQIMGDEFFTTNLERLENAIEQNTCNALLL
KLNQIGTVTEAIEANNLARNAGFGVMISHRAGDTEDPFIAALCAGLGTGQ
IKSGAPCRSERLAKYNELIRIEEDLGDSAAFAGDYWRDPWMMENTRNPAY
M*
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spliced messenger RNA

>Gvermi3280.t1 ID=Gvermi3280.t1|Name=Gvermi3280.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=mRNA|length=1356bp|location=Sequence derived from alignment at ScGOVlb_41:905924..907279- (Gracilaria vermiculophylla HapMaleFtJ_2017 male)|Notes=Excludes all bases but those of type(s): exon.  
ATGTCTCGAATCAAAGATGTACGGGGTCGCCAACTTTTTGACTCCCTGGG
CAATCCCACCCTTGAGGTTGAGGTAGAGACAGATGACGGCTGTTTCCGCG
CCATAGTGCCGGCCGGTTCCTCTGAAGGTGCCAACGAAGCACATGAGTTA
AGAGACGGTGATGCGAGCGTATTCGGCGGAAAGGGGGTATCCAAAGCGAT
CAAGAACGTCAACAATGAGCTCGCTGTAGCCGTTATTGGAATGGATCCAA
CGGATCAAGAAGGGATAGATCAGGCCCTAATTGATTGTGACGGCAGTGAC
GATGGCACCAAACGTCGTCTAGGTGCCAACGCAATCCTTGGTGTTTCAAT
GGCCGTTTCTCGCGCTGGAGCTGCAAAGAAGGATATACCTTTGTACAAAC
ATCTTAACAACCTTGCTGGAAATCCCAACATCATTTTGCCGGTTCCTTGT
TTTAATGTTTTGAGTGGTGGATCGCGTGCTAGCAACGGTCTTAGCTTCCA
AGAGTTTATTGTCATGCCTACGGGTGCAGATTCATTCAAACAGGCCATGA
GGATCGGCGTAGAAGTCTACCACAAATTGAAGCAAATGGTGGCTGAGCAA
TATGGACAGGGGTCCACCACCGTAGATGAAGAAGGGGGATTCGCTCCTGA
TATGGATGACAACGACGAAGCTTTCAAATTGCTGAAGGCAGCCATTAAGG
AATCAGGATTTGAGGAACTTGTTCAAATCGGAGTCGATGTCGCGGCAAAT
GACTTTTATGACAAACCATCGGGGAAATACGACCTTAATTTCAAGCAAAC
GGAAAAAGAAAGTTCCGCAGAGAAAATGAAATCCGGGGACGATCTATTAC
AAATGTACAAGGTGTATGCTGCTAACTATGGGGTGGTTTCCATCGAAGAT
CCTTTCCACAAGGACGATTTGGAGTCCTATTCGAAAATGACCGGCGAGTT
GGGTGAGCTTATCCAAATCATGGGTGATGAATTCTTTACGACTAATCTAG
AGAGGCTTGAAAACGCAATCGAACAAAATACATGTAATGCTCTACTCTTG
AAACTAAACCAAATTGGGACCGTCACAGAGGCAATCGAGGCAAATAATCT
TGCTCGCAATGCAGGTTTTGGAGTGATGATTAGTCATCGCGCCGGGGATA
CGGAAGATCCATTTATTGCGGCGCTTTGCGCGGGACTAGGTACTGGTCAG
ATAAAATCAGGAGCTCCTTGCCGTTCCGAAAGGCTGGCCAAGTATAATGA
GCTCATTCGCATTGAAGAGGATTTGGGGGACAGTGCTGCATTCGCTGGGG
ATTATTGGAGGGACCCATGGATGATGGAAAATACCCGAAACCCGGCGTAT
ATGTGA
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protein sequence of Gvermi3280.t1

>Gvermi3280.t1 ID=Gvermi3280.t1|Name=Gvermi3280.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=452bp
MSRIKDVRGRQLFDSLGNPTLEVEVETDDGCFRAIVPAGSSEGANEAHEL
RDGDASVFGGKGVSKAIKNVNNELAVAVIGMDPTDQEGIDQALIDCDGSD
DGTKRRLGANAILGVSMAVSRAGAAKKDIPLYKHLNNLAGNPNIILPVPC
FNVLSGGSRASNGLSFQEFIVMPTGADSFKQAMRIGVEVYHKLKQMVAEQ
YGQGSTTVDEEGGFAPDMDDNDEAFKLLKAAIKESGFEELVQIGVDVAAN
DFYDKPSGKYDLNFKQTEKESSAEKMKSGDDLLQMYKVYAANYGVVSIED
PFHKDDLESYSKMTGELGELIQIMGDEFFTTNLERLENAIEQNTCNALLL
KLNQIGTVTEAIEANNLARNAGFGVMISHRAGDTEDPFIAALCAGLGTGQ
IKSGAPCRSERLAKYNELIRIEEDLGDSAAFAGDYWRDPWMMENTRNPAY
M*
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mRNA from alignment at ScGOVlb_41:905924..907279-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Gvermi3280.t1 ID=Gvermi3280.t1|Name=Gvermi3280.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=mRNA|length=1356bp|location=Sequence derived from alignment at ScGOVlb_41:905924..907279- (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
ATGTCTCGAATCAAAGATGTACGGGGTCGCCAACTTTTTGACTCCCTGGG
CAATCCCACCCTTGAGGTTGAGGTAGAGACAGATGACGGCTGTTTCCGCG
CCATAGTGCCGGCCGGTTCCTCTGAAGGTGCCAACGAAGCACATGAGTTA
AGAGACGGTGATGCGAGCGTATTCGGCGGAAAGGGGGTATCCAAAGCGAT
CAAGAACGTCAACAATGAGCTCGCTGTAGCCGTTATTGGAATGGATCCAA
CGGATCAAGAAGGGATAGATCAGGCCCTAATTGATTGTGACGGCAGTGAC
GATGGCACCAAACGTCGTCTAGGTGCCAACGCAATCCTTGGTGTTTCAAT
GGCCGTTTCTCGCGCTGGAGCTGCAAAGAAGGATATACCTTTGTACAAAC
ATCTTAACAACCTTGCTGGAAATCCCAACATCATTTTGCCGGTTCCTTGT
TTTAATGTTTTGAGTGGTGGATCGCGTGCTAGCAACGGTCTTAGCTTCCA
AGAGTTTATTGTCATGCCTACGGGTGCAGATTCATTCAAACAGGCCATGA
GGATCGGCGTAGAAGTCTACCACAAATTGAAGCAAATGGTGGCTGAGCAA
TATGGACAGGGGTCCACCACCGTAGATGAAGAAGGGGGATTCGCTCCTGA
TATGGATGACAACGACGAAGCTTTCAAATTGCTGAAGGCAGCCATTAAGG
AATCAGGATTTGAGGAACTTGTTCAAATCGGAGTCGATGTCGCGGCAAAT
GACTTTTATGACAAACCATCGGGGAAATACGACCTTAATTTCAAGCAAAC
GGAAAAAGAAAGTTCCGCAGAGAAAATGAAATCCGGGGACGATCTATTAC
AAATGTACAAGGTGTATGCTGCTAACTATGGGGTGGTTTCCATCGAAGAT
CCTTTCCACAAGGACGATTTGGAGTCCTATTCGAAAATGACCGGCGAGTT
GGGTGAGCTTATCCAAATCATGGGTGATGAATTCTTTACGACTAATCTAG
AGAGGCTTGAAAACGCAATCGAACAAAATACATGTAATGCTCTACTCTTG
AAACTAAACCAAATTGGGACCGTCACAGAGGCAATCGAGGCAAATAATCT
TGCTCGCAATGCAGGTTTTGGAGTGATGATTAGTCATCGCGCCGGGGATA
CGGAAGATCCATTTATTGCGGCGCTTTGCGCGGGACTAGGTACTGGTCAG
ATAAAATCAGGAGCTCCTTGCCGTTCCGAAAGGCTGGCCAAGTATAATGA
GCTCATTCGCATTGAAGAGGATTTGGGGGACAGTGCTGCATTCGCTGGGG
ATTATTGGAGGGACCCATGGATGATGGAAAATACCCGAAACCCGGCGTAT
ATGTGA
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Coding sequence (CDS) from alignment at ScGOVlb_41:905924..907279-

>Gvermi3280.t1 ID=Gvermi3280.t1|Name=Gvermi3280.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=CDS|length=1356bp|location=Sequence derived from alignment at ScGOVlb_41:905924..907279- (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
ATGTCTCGAATCAAAGATGTACGGGGTCGCCAACTTTTTGACTCCCTGGG
CAATCCCACCCTTGAGGTTGAGGTAGAGACAGATGACGGCTGTTTCCGCG
CCATAGTGCCGGCCGGTTCCTCTGAAGGTGCCAACGAAGCACATGAGTTA
AGAGACGGTGATGCGAGCGTATTCGGCGGAAAGGGGGTATCCAAAGCGAT
CAAGAACGTCAACAATGAGCTCGCTGTAGCCGTTATTGGAATGGATCCAA
CGGATCAAGAAGGGATAGATCAGGCCCTAATTGATTGTGACGGCAGTGAC
GATGGCACCAAACGTCGTCTAGGTGCCAACGCAATCCTTGGTGTTTCAAT
GGCCGTTTCTCGCGCTGGAGCTGCAAAGAAGGATATACCTTTGTACAAAC
ATCTTAACAACCTTGCTGGAAATCCCAACATCATTTTGCCGGTTCCTTGT
TTTAATGTTTTGAGTGGTGGATCGCGTGCTAGCAACGGTCTTAGCTTCCA
AGAGTTTATTGTCATGCCTACGGGTGCAGATTCATTCAAACAGGCCATGA
GGATCGGCGTAGAAGTCTACCACAAATTGAAGCAAATGGTGGCTGAGCAA
TATGGACAGGGGTCCACCACCGTAGATGAAGAAGGGGGATTCGCTCCTGA
TATGGATGACAACGACGAAGCTTTCAAATTGCTGAAGGCAGCCATTAAGG
AATCAGGATTTGAGGAACTTGTTCAAATCGGAGTCGATGTCGCGGCAAAT
GACTTTTATGACAAACCATCGGGGAAATACGACCTTAATTTCAAGCAAAC
GGAAAAAGAAAGTTCCGCAGAGAAAATGAAATCCGGGGACGATCTATTAC
AAATGTACAAGGTGTATGCTGCTAACTATGGGGTGGTTTCCATCGAAGAT
CCTTTCCACAAGGACGATTTGGAGTCCTATTCGAAAATGACCGGCGAGTT
GGGTGAGCTTATCCAAATCATGGGTGATGAATTCTTTACGACTAATCTAG
AGAGGCTTGAAAACGCAATCGAACAAAATACATGTAATGCTCTACTCTTG
AAACTAAACCAAATTGGGACCGTCACAGAGGCAATCGAGGCAAATAATCT
TGCTCGCAATGCAGGTTTTGGAGTGATGATTAGTCATCGCGCCGGGGATA
CGGAAGATCCATTTATTGCGGCGCTTTGCGCGGGACTAGGTACTGGTCAG
ATAAAATCAGGAGCTCCTTGCCGTTCCGAAAGGCTGGCCAAGTATAATGA
GCTCATTCGCATTGAAGAGGATTTGGGGGACAGTGCTGCATTCGCTGGGG
ATTATTGGAGGGACCCATGGATGATGGAAAATACCCGAAACCCGGCGTAT
ATGTGA
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