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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Seed ortholog | 130081.XP_005704294.1 |
| PFAMs | DUF295,F-box,RHD3 |
| Max annot lvl | 2759|Eukaryota |
| Evalue | 3.35e-128 |
| EggNOG OGs | KOG2203@1|root,KOG2203@2759|Eukaryota |
| Description | GTP binding |
| COG category | T |
Relationships
This mRNA is a part of the following gene feature(s):
The following start_codon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following stop_codon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Gvermi12934.t1 ID=Gvermi12934.t1|Name=Gvermi12934.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=mRNA|length=812bp MTSAISDDATAVEAEASHMVQVVNYEQQFNDDLETFLRAKRISQLGFDYN VTAIMGPQSSGKSTLMNMLFGTKFPTMDSGGGRYQVTQGVWLGRDKEAGI LVMDLEGTDSRERGEDAATYERKSALFALALAEVLVVNVWIHDVGRNNAS NMPLLRTIMELDLQLFFGAAGSDAGTKRMPKTKLLFVIRDYDSTPFEKLC ASLREDLDNIWNTINKPEAALGTPITDYFDLDFEALPHKVYCPMEFEEKV GELKKRFHGGDVFKKDYSRGVAADGFSEYARSVWETIRANKELDIPSQKE MLAHVRCEQIAKDVFFIFENAIGLLKGDLLPADRSMPTIVPCLFSTLLEN CDSALSKYNEGASRYSAAVAEMKADDVRAHLSSECKMLFDSQITAATDAA IKEFQEIVKGSENGSVSEPWLNWNEHSKTAMENAMKVFDDACKTTELCKS VSDANAMKAHPLGFAITSSMIARKRLEKTLETELKRETARVLSESRAHCL GTFRSAFKAPMTTVLENVPDDMWSRTSEVADVSWEATAREAKTVYGENGL ALEEDKLKNLEEELKNECRDSAVNDIKAAIGTPSNMLLRMMKRFEDSFRF DERGVPRHFGPSEDIEALFVAAREKGEKLVELMSEVRLQGSLGGATTTAS RSIGKKGSQVTIIDSNAQADLRDKLKRQSGAIFMEAKRAQEAARITTKVP IWLIGVVLILGWNEFMAVLRNPLLLMLTIIVVPMVYVGYTLDAPTYLAPA VIATLKPMVDQAKDFLEQTTSAPVSQHAAEPAPVCKSPSSESTVVSANHT ESAIVPEEKTS* back to topspliced messenger RNA >Gvermi12934.t1 ID=Gvermi12934.t1|Name=Gvermi12934.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=mRNA|length=2436bp|location=Sequence derived from alignment at ScGOVlb_425:2226561..2228996+ (Gracilaria vermiculophylla HapMaleFtJ_2017 male)|Notes=Excludes all bases but those of type(s): exon.
ATGACTTCAGCAATTTCTGATGATGCAACTGCCGTTGAGGCTGAAGCCTC TCACATGGTGCAGGTGGTTAACTATGAGCAGCAATTCAATGACGATTTGG AGACATTTCTGCGCGCCAAGCGCATCTCGCAATTGGGTTTCGACTATAAC GTGACAGCAATTATGGGGCCTCAGTCTTCCGGAAAGTCTACTTTGATGAA CATGCTTTTTGGAACGAAGTTTCCTACTATGGACAGTGGTGGTGGTCGTT ACCAAGTTACACAGGGTGTGTGGCTTGGTCGTGATAAAGAAGCGGGCATT CTCGTCATGGATTTGGAAGGAACGGATTCACGAGAAAGAGGGGAAGATGC CGCTACATACGAAAGAAAAAGTGCACTGTTCGCTTTGGCACTTGCGGAGG TGCTTGTGGTGAATGTGTGGATCCACGACGTTGGTCGAAACAACGCGTCT AACATGCCCTTACTGAGAACAATCATGGAGCTTGACCTGCAGTTGTTCTT TGGCGCCGCTGGATCGGATGCTGGAACAAAGCGCATGCCAAAGACAAAGC TGCTCTTTGTTATCCGCGATTACGATTCTACCCCCTTTGAGAAGCTGTGC GCTTCCCTTCGTGAGGACTTGGATAACATCTGGAATACAATCAATAAACC AGAAGCGGCCTTGGGCACTCCCATTACCGATTATTTTGACCTTGACTTTG AGGCATTACCTCACAAGGTGTATTGTCCCATGGAGTTCGAAGAGAAAGTA GGAGAACTGAAGAAGCGTTTCCATGGCGGCGATGTCTTTAAGAAGGATTA TAGCCGTGGGGTTGCCGCCGATGGGTTTTCAGAATATGCAAGGTCCGTAT GGGAAACCATTCGTGCAAATAAGGAGCTTGATATTCCCTCGCAGAAAGAA ATGCTGGCTCACGTTCGATGTGAACAGATCGCCAAGGATGTATTTTTCAT CTTTGAGAACGCAATAGGATTGCTCAAGGGGGATCTTTTGCCTGCGGATC GTTCCATGCCGACGATTGTGCCCTGTCTATTCAGCACCCTTTTGGAAAAC TGTGATAGCGCGCTGAGCAAATACAATGAAGGGGCTTCACGCTACTCGGC AGCTGTAGCCGAGATGAAGGCAGATGACGTTCGCGCTCACCTTTCGTCCG AGTGCAAAATGCTGTTCGATTCTCAAATTACTGCCGCAACCGATGCGGCC ATAAAGGAATTCCAGGAAATTGTTAAAGGAAGCGAGAACGGATCAGTGTC TGAGCCGTGGCTCAATTGGAATGAACACTCGAAGACCGCCATGGAGAATG CGATGAAAGTCTTTGATGATGCGTGCAAGACGACTGAGTTATGCAAGAGC GTTTCGGATGCCAATGCGATGAAGGCCCATCCCCTTGGATTTGCAATTAC TTCATCGATGATTGCGCGAAAGAGACTGGAAAAGACTTTAGAAACTGAGC TGAAGCGTGAGACGGCCAGGGTTCTTTCGGAATCGCGTGCGCATTGCTTG GGAACCTTCCGATCTGCTTTTAAGGCTCCGATGACAACTGTCTTAGAAAA TGTGCCTGACGATATGTGGAGCCGCACTTCCGAGGTCGCTGATGTTTCGT GGGAAGCTACGGCGAGGGAGGCCAAGACTGTCTATGGTGAAAATGGGCTC GCACTGGAGGAGGACAAATTGAAGAACTTAGAAGAGGAGTTGAAGAACGA GTGTCGGGACTCAGCTGTTAATGATATCAAGGCTGCAATCGGCACACCGT CCAACATGTTGTTGAGAATGATGAAGCGCTTCGAAGATTCCTTCCGCTTT GACGAAAGAGGGGTGCCTCGGCATTTCGGACCGAGTGAGGACATTGAAGC GCTGTTCGTCGCTGCGAGAGAAAAAGGAGAGAAACTTGTCGAATTAATGT CGGAAGTGCGATTGCAAGGATCTCTTGGTGGTGCGACAACCACTGCCAGC CGGAGCATTGGCAAGAAAGGAAGCCAGGTGACTATTATTGACTCAAACGC GCAGGCCGACCTCAGGGACAAGCTCAAGCGTCAGAGTGGAGCCATTTTCA TGGAGGCAAAACGTGCGCAAGAAGCTGCAAGAATCACAACCAAGGTTCCG ATCTGGCTCATCGGCGTGGTACTGATTCTCGGGTGGAACGAATTCATGGC TGTTTTGCGGAATCCGTTGTTGCTGATGCTCACGATAATTGTTGTACCCA TGGTGTACGTGGGATACACCCTGGATGCTCCTACGTATCTGGCGCCCGCG GTGATAGCCACTCTGAAGCCCATGGTGGATCAAGCAAAAGACTTTTTAGA ACAGACCACCAGCGCTCCGGTTTCCCAGCACGCCGCAGAGCCCGCGCCAG TTTGCAAGTCTCCGTCAAGCGAGAGTACCGTGGTGTCGGCAAACCATACA GAGAGTGCGATAGTCCCGGAGGAGAAAACAAGCTGA back to topprotein sequence of Gvermi12934.t1 >Gvermi12934.t1 ID=Gvermi12934.t1|Name=Gvermi12934.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=812bp
MTSAISDDATAVEAEASHMVQVVNYEQQFNDDLETFLRAKRISQLGFDYN VTAIMGPQSSGKSTLMNMLFGTKFPTMDSGGGRYQVTQGVWLGRDKEAGI LVMDLEGTDSRERGEDAATYERKSALFALALAEVLVVNVWIHDVGRNNAS NMPLLRTIMELDLQLFFGAAGSDAGTKRMPKTKLLFVIRDYDSTPFEKLC ASLREDLDNIWNTINKPEAALGTPITDYFDLDFEALPHKVYCPMEFEEKV GELKKRFHGGDVFKKDYSRGVAADGFSEYARSVWETIRANKELDIPSQKE MLAHVRCEQIAKDVFFIFENAIGLLKGDLLPADRSMPTIVPCLFSTLLEN CDSALSKYNEGASRYSAAVAEMKADDVRAHLSSECKMLFDSQITAATDAA IKEFQEIVKGSENGSVSEPWLNWNEHSKTAMENAMKVFDDACKTTELCKS VSDANAMKAHPLGFAITSSMIARKRLEKTLETELKRETARVLSESRAHCL GTFRSAFKAPMTTVLENVPDDMWSRTSEVADVSWEATAREAKTVYGENGL ALEEDKLKNLEEELKNECRDSAVNDIKAAIGTPSNMLLRMMKRFEDSFRF DERGVPRHFGPSEDIEALFVAAREKGEKLVELMSEVRLQGSLGGATTTAS RSIGKKGSQVTIIDSNAQADLRDKLKRQSGAIFMEAKRAQEAARITTKVP IWLIGVVLILGWNEFMAVLRNPLLLMLTIIVVPMVYVGYTLDAPTYLAPA VIATLKPMVDQAKDFLEQTTSAPVSQHAAEPAPVCKSPSSESTVVSANHT ESAIVPEEKTS* back to topmRNA from alignment at ScGOVlb_425:2226561..2228996+ Legend: start_codonpolypeptideCDSexonstop_codon Hold the cursor over a type above to highlight its positions in the sequence below. >Gvermi12934.t1 ID=Gvermi12934.t1|Name=Gvermi12934.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=mRNA|length=2436bp|location=Sequence derived from alignment at ScGOVlb_425:2226561..2228996+ (Gracilaria vermiculophylla HapMaleFtJ_2017 male) ATGACTTCAGCAATTTCTGATGATGCAACTGCCGTTGAGGCTGAAGCCTC
TCACATGGTGCAGGTGGTTAACTATGAGCAGCAATTCAATGACGATTTGG
AGACATTTCTGCGCGCCAAGCGCATCTCGCAATTGGGTTTCGACTATAAC
GTGACAGCAATTATGGGGCCTCAGTCTTCCGGAAAGTCTACTTTGATGAA
CATGCTTTTTGGAACGAAGTTTCCTACTATGGACAGTGGTGGTGGTCGTT
ACCAAGTTACACAGGGTGTGTGGCTTGGTCGTGATAAAGAAGCGGGCATT
CTCGTCATGGATTTGGAAGGAACGGATTCACGAGAAAGAGGGGAAGATGC
CGCTACATACGAAAGAAAAAGTGCACTGTTCGCTTTGGCACTTGCGGAGG
TGCTTGTGGTGAATGTGTGGATCCACGACGTTGGTCGAAACAACGCGTCT
AACATGCCCTTACTGAGAACAATCATGGAGCTTGACCTGCAGTTGTTCTT
TGGCGCCGCTGGATCGGATGCTGGAACAAAGCGCATGCCAAAGACAAAGC
TGCTCTTTGTTATCCGCGATTACGATTCTACCCCCTTTGAGAAGCTGTGC
GCTTCCCTTCGTGAGGACTTGGATAACATCTGGAATACAATCAATAAACC
AGAAGCGGCCTTGGGCACTCCCATTACCGATTATTTTGACCTTGACTTTG
AGGCATTACCTCACAAGGTGTATTGTCCCATGGAGTTCGAAGAGAAAGTA
GGAGAACTGAAGAAGCGTTTCCATGGCGGCGATGTCTTTAAGAAGGATTA
TAGCCGTGGGGTTGCCGCCGATGGGTTTTCAGAATATGCAAGGTCCGTAT
GGGAAACCATTCGTGCAAATAAGGAGCTTGATATTCCCTCGCAGAAAGAA
ATGCTGGCTCACGTTCGATGTGAACAGATCGCCAAGGATGTATTTTTCAT
CTTTGAGAACGCAATAGGATTGCTCAAGGGGGATCTTTTGCCTGCGGATC
GTTCCATGCCGACGATTGTGCCCTGTCTATTCAGCACCCTTTTGGAAAAC
TGTGATAGCGCGCTGAGCAAATACAATGAAGGGGCTTCACGCTACTCGGC
AGCTGTAGCCGAGATGAAGGCAGATGACGTTCGCGCTCACCTTTCGTCCG
AGTGCAAAATGCTGTTCGATTCTCAAATTACTGCCGCAACCGATGCGGCC
ATAAAGGAATTCCAGGAAATTGTTAAAGGAAGCGAGAACGGATCAGTGTC
TGAGCCGTGGCTCAATTGGAATGAACACTCGAAGACCGCCATGGAGAATG
CGATGAAAGTCTTTGATGATGCGTGCAAGACGACTGAGTTATGCAAGAGC
GTTTCGGATGCCAATGCGATGAAGGCCCATCCCCTTGGATTTGCAATTAC
TTCATCGATGATTGCGCGAAAGAGACTGGAAAAGACTTTAGAAACTGAGC
TGAAGCGTGAGACGGCCAGGGTTCTTTCGGAATCGCGTGCGCATTGCTTG
GGAACCTTCCGATCTGCTTTTAAGGCTCCGATGACAACTGTCTTAGAAAA
TGTGCCTGACGATATGTGGAGCCGCACTTCCGAGGTCGCTGATGTTTCGT
GGGAAGCTACGGCGAGGGAGGCCAAGACTGTCTATGGTGAAAATGGGCTC
GCACTGGAGGAGGACAAATTGAAGAACTTAGAAGAGGAGTTGAAGAACGA
GTGTCGGGACTCAGCTGTTAATGATATCAAGGCTGCAATCGGCACACCGT
CCAACATGTTGTTGAGAATGATGAAGCGCTTCGAAGATTCCTTCCGCTTT
GACGAAAGAGGGGTGCCTCGGCATTTCGGACCGAGTGAGGACATTGAAGC
GCTGTTCGTCGCTGCGAGAGAAAAAGGAGAGAAACTTGTCGAATTAATGT
CGGAAGTGCGATTGCAAGGATCTCTTGGTGGTGCGACAACCACTGCCAGC
CGGAGCATTGGCAAGAAAGGAAGCCAGGTGACTATTATTGACTCAAACGC
GCAGGCCGACCTCAGGGACAAGCTCAAGCGTCAGAGTGGAGCCATTTTCA
TGGAGGCAAAACGTGCGCAAGAAGCTGCAAGAATCACAACCAAGGTTCCG
ATCTGGCTCATCGGCGTGGTACTGATTCTCGGGTGGAACGAATTCATGGC
TGTTTTGCGGAATCCGTTGTTGCTGATGCTCACGATAATTGTTGTACCCA
TGGTGTACGTGGGATACACCCTGGATGCTCCTACGTATCTGGCGCCCGCG
GTGATAGCCACTCTGAAGCCCATGGTGGATCAAGCAAAAGACTTTTTAGA
ACAGACCACCAGCGCTCCGGTTTCCCAGCACGCCGCAGAGCCCGCGCCAG
TTTGCAAGTCTCCGTCAAGCGAGAGTACCGTGGTGTCGGCAAACCATACA
GAGAGTGCGATAGTCCCGGAGGAGAAAACAAGCTGA back to topCoding sequence (CDS) from alignment at ScGOVlb_425:2226561..2228996+ >Gvermi12934.t1 ID=Gvermi12934.t1|Name=Gvermi12934.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=CDS|length=2436bp|location=Sequence derived from alignment at ScGOVlb_425:2226561..2228996+ (Gracilaria vermiculophylla HapMaleFtJ_2017 male) ATGACTTCAGCAATTTCTGATGATGCAACTGCCGTTGAGGCTGAAGCCTC TCACATGGTGCAGGTGGTTAACTATGAGCAGCAATTCAATGACGATTTGG AGACATTTCTGCGCGCCAAGCGCATCTCGCAATTGGGTTTCGACTATAAC GTGACAGCAATTATGGGGCCTCAGTCTTCCGGAAAGTCTACTTTGATGAA CATGCTTTTTGGAACGAAGTTTCCTACTATGGACAGTGGTGGTGGTCGTT ACCAAGTTACACAGGGTGTGTGGCTTGGTCGTGATAAAGAAGCGGGCATT CTCGTCATGGATTTGGAAGGAACGGATTCACGAGAAAGAGGGGAAGATGC CGCTACATACGAAAGAAAAAGTGCACTGTTCGCTTTGGCACTTGCGGAGG TGCTTGTGGTGAATGTGTGGATCCACGACGTTGGTCGAAACAACGCGTCT AACATGCCCTTACTGAGAACAATCATGGAGCTTGACCTGCAGTTGTTCTT TGGCGCCGCTGGATCGGATGCTGGAACAAAGCGCATGCCAAAGACAAAGC TGCTCTTTGTTATCCGCGATTACGATTCTACCCCCTTTGAGAAGCTGTGC GCTTCCCTTCGTGAGGACTTGGATAACATCTGGAATACAATCAATAAACC AGAAGCGGCCTTGGGCACTCCCATTACCGATTATTTTGACCTTGACTTTG AGGCATTACCTCACAAGGTGTATTGTCCCATGGAGTTCGAAGAGAAAGTA GGAGAACTGAAGAAGCGTTTCCATGGCGGCGATGTCTTTAAGAAGGATTA TAGCCGTGGGGTTGCCGCCGATGGGTTTTCAGAATATGCAAGGTCCGTAT GGGAAACCATTCGTGCAAATAAGGAGCTTGATATTCCCTCGCAGAAAGAA ATGCTGGCTCACGTTCGATGTGAACAGATCGCCAAGGATGTATTTTTCAT CTTTGAGAACGCAATAGGATTGCTCAAGGGGGATCTTTTGCCTGCGGATC GTTCCATGCCGACGATTGTGCCCTGTCTATTCAGCACCCTTTTGGAAAAC TGTGATAGCGCGCTGAGCAAATACAATGAAGGGGCTTCACGCTACTCGGC AGCTGTAGCCGAGATGAAGGCAGATGACGTTCGCGCTCACCTTTCGTCCG AGTGCAAAATGCTGTTCGATTCTCAAATTACTGCCGCAACCGATGCGGCC ATAAAGGAATTCCAGGAAATTGTTAAAGGAAGCGAGAACGGATCAGTGTC TGAGCCGTGGCTCAATTGGAATGAACACTCGAAGACCGCCATGGAGAATG CGATGAAAGTCTTTGATGATGCGTGCAAGACGACTGAGTTATGCAAGAGC GTTTCGGATGCCAATGCGATGAAGGCCCATCCCCTTGGATTTGCAATTAC TTCATCGATGATTGCGCGAAAGAGACTGGAAAAGACTTTAGAAACTGAGC TGAAGCGTGAGACGGCCAGGGTTCTTTCGGAATCGCGTGCGCATTGCTTG GGAACCTTCCGATCTGCTTTTAAGGCTCCGATGACAACTGTCTTAGAAAA TGTGCCTGACGATATGTGGAGCCGCACTTCCGAGGTCGCTGATGTTTCGT GGGAAGCTACGGCGAGGGAGGCCAAGACTGTCTATGGTGAAAATGGGCTC GCACTGGAGGAGGACAAATTGAAGAACTTAGAAGAGGAGTTGAAGAACGA GTGTCGGGACTCAGCTGTTAATGATATCAAGGCTGCAATCGGCACACCGT CCAACATGTTGTTGAGAATGATGAAGCGCTTCGAAGATTCCTTCCGCTTT GACGAAAGAGGGGTGCCTCGGCATTTCGGACCGAGTGAGGACATTGAAGC GCTGTTCGTCGCTGCGAGAGAAAAAGGAGAGAAACTTGTCGAATTAATGT CGGAAGTGCGATTGCAAGGATCTCTTGGTGGTGCGACAACCACTGCCAGC CGGAGCATTGGCAAGAAAGGAAGCCAGGTGACTATTATTGACTCAAACGC GCAGGCCGACCTCAGGGACAAGCTCAAGCGTCAGAGTGGAGCCATTTTCA TGGAGGCAAAACGTGCGCAAGAAGCTGCAAGAATCACAACCAAGGTTCCG ATCTGGCTCATCGGCGTGGTACTGATTCTCGGGTGGAACGAATTCATGGC TGTTTTGCGGAATCCGTTGTTGCTGATGCTCACGATAATTGTTGTACCCA TGGTGTACGTGGGATACACCCTGGATGCTCCTACGTATCTGGCGCCCGCG GTGATAGCCACTCTGAAGCCCATGGTGGATCAAGCAAAAGACTTTTTAGA ACAGACCACCAGCGCTCCGGTTTCCCAGCACGCCGCAGAGCCCGCGCCAG TTTGCAAGTCTCCGTCAAGCGAGAGTACCGTGGTGTCGGCAAACCATACA GAGAGTGCGATAGTCCCGGAGGAGAAAACAAGCTGA back to top
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