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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following start_codon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following intron feature(s) are a part of this mRNA:
The following stop_codon feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Gvermi12867.t1 ID=Gvermi12867.t1|Name=Gvermi12867.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=mRNA|length=555bp LAFEPCASSADCQGDRSCSQLAGSASGSVDLVDCGAGMCFCTSADGCAAT DDCLDGETCASSTCLSNSFVPGAAVLDDADPALGLNLDPCQTISDCQNPR NCVQYVDGVFGQCSGPNCFCIKLDPSCTSASQCSQGESCTKRESANNAIC ISETAVIADSMDEQIDDIPDSGPALPPMVNVPAMQPPAAQPSASQPPSTQ PPAMQPAATQPPATQPPASQPPATQPPATSTAAVDVSEQPQEAETTETAE VVETPDSEQQTQPLLPPARAAEQPHHPQPPVCHFSAEITNVADEHMYFSD EDEFDSQVLDASTPPPSHTAAADVLSTKVRRAVSALRSISFQSNQGEDFD TAWGQTLCVSHDKQSPSLASLASAKWRRALSRSPSRSAAAAAAAARAADH AHAADHDAASARSSASLASGSRERSASAHHNVRGFAALRMRANLGGAHRR SLWAGARRERQQQQQPHAVAAQLLVSGAGHGFLAASTDMAEQRQALATVA PPPDALDGPNSVQKGSVDKYVEFIHASAQRETKGRFGPRNLPSRVLRLFR RKWN* back to topspliced messenger RNA >Gvermi12867.t1 ID=Gvermi12867.t1|Name=Gvermi12867.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=mRNA|length=1665bp|location=Sequence derived from alignment at ScGOVlb_425:1846556..1852720+ (Gracilaria vermiculophylla HapMaleFtJ_2017 male)|Notes=Excludes all bases but those of type(s): exon.
TTGGCCTTCGAGCCGTGCGCCTCGTCGGCCGACTGCCAGGGCGACCGATC GTGCTCGCAGCTTGCCGGCTCCGCGTCCGGCTCCGTCGATCTCGTCGACT GCGGCGCCGGCATGTGCTTCTGCACCAGCGCCGACGGCTGCGCCGCCACG GACGACTGCCTGGACGGCGAGACGTGCGCCAGCTCCACCTGCCTGTCCAA CTCCTTCGTGCCCGGCGCCGCCGTGCTCGACGACGCCGACCCCGCGCTGG GCCTCAACCTGGACCCGTGCCAGACCATCTCCGACTGCCAGAACCCGCGC AACTGCGTGCAGTACGTGGACGGCGTGTTTGGCCAGTGCTCCGGCCCCAA CTGCTTCTGCATCAAGTTGGACCCGAGCTGCACCTCCGCGTCGCAGTGCT CGCAGGGTGAGTCGTGCACCAAGCGCGAGAGCGCCAACAACGCCATTTGC ATCTCCGAGACCGCCGTCATCGCCGATTCCATGGATGAGCAGATCGATGA CATTCCCGACTCGGGTCCTGCGCTGCCGCCCATGGTGAACGTGCCTGCAA TGCAGCCCCCAGCCGCGCAGCCTTCTGCCTCGCAGCCGCCTTCCACGCAG CCGCCTGCCATGCAGCCTGCCGCCACGCAGCCGCCCGCCACGCAGCCGCC TGCCTCGCAGCCGCCTGCCACGCAGCCGCCTGCCACCTCCACCGCCGCCG TCGACGTTTCGGAACAACCGCAGGAAGCAGAAACAACCGAAACGGCCGAA GTGGTGGAAACGCCCGATAGCGAACAGCAAACGCAGCCGCTTCTGCCGCC GGCTCGCGCGGCCGAGCAGCCGCACCACCCGCAGCCCCCGGTGTGCCACT TCTCGGCCGAGATCACCAACGTCGCGGACGAGCACATGTACTTCTCGGAC GAGGACGAGTTCGACTCGCAGGTGCTGGAcgccagcacgccgcccccgtc gcacaccgccgccgccgacgTGCTGTCCACCAAGGTGCGCCGCGCCGTCA GCGCCCTGCGCAGCATCTCGTTCCAGTCCAACCAGGGCGAGGACTTCGAC ACGGCGTGGGGCCAGACGCTGTGCGTGTCGCACGACAAGCAGAGCCCGTC GCTGGCCAGCCTGGCGTCGGCCAAGTGGCGCCGCGCGCTCAGCCGCTCGC CCAGTCGCTccgccgccgccgccgccgccgccgcgcgcgccgccgACCAC GCCCACGCCGCCGACCACGACGCCGCCAGCGCGCGCTCCAGCGCGTCGCT CGCGTCGGGCAGCCGCGAGCGCTCCGCCAGCGCGCACCACAACGTGCGCG GCTTCGCCGCGCTGCGCATGCGCGCCAACTTGGGCGGCGCGCACAGGCGC TCGCTGTGGGCGGGCGCGCGCAGGGAGCGCcagcagcagcagcagccgca cgcggtcgccgcgcagctgcTCGTGTCGGGCGCCGGCCACGGCTTCCTGG CCGCGTCCACCGACATGGCCGAGCAGCGCCAGGCGCTGGCCACGGTCGCG CCGCCGCCGGACGCGCTGGACGGCCCCAACTCCGTGCAGAAGGGCTCGGT GGACAAGTACGTGGAGTTCATCCACGCCTCGGCGCAGCGCGAGACCAAGG GCCGCTTCGGCCCGCGCAACTTGCCAAGTCGCGTGCTCAGGCTGTTCCGA AGAAAGTGGAACTAG back to topprotein sequence of Gvermi12867.t1 >Gvermi12867.t1 ID=Gvermi12867.t1|Name=Gvermi12867.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=555bp
LAFEPCASSADCQGDRSCSQLAGSASGSVDLVDCGAGMCFCTSADGCAAT DDCLDGETCASSTCLSNSFVPGAAVLDDADPALGLNLDPCQTISDCQNPR NCVQYVDGVFGQCSGPNCFCIKLDPSCTSASQCSQGESCTKRESANNAIC ISETAVIADSMDEQIDDIPDSGPALPPMVNVPAMQPPAAQPSASQPPSTQ PPAMQPAATQPPATQPPASQPPATQPPATSTAAVDVSEQPQEAETTETAE VVETPDSEQQTQPLLPPARAAEQPHHPQPPVCHFSAEITNVADEHMYFSD EDEFDSQVLDASTPPPSHTAAADVLSTKVRRAVSALRSISFQSNQGEDFD TAWGQTLCVSHDKQSPSLASLASAKWRRALSRSPSRSAAAAAAAARAADH AHAADHDAASARSSASLASGSRERSASAHHNVRGFAALRMRANLGGAHRR SLWAGARRERQQQQQPHAVAAQLLVSGAGHGFLAASTDMAEQRQALATVA PPPDALDGPNSVQKGSVDKYVEFIHASAQRETKGRFGPRNLPSRVLRLFR RKWN* back to topmRNA from alignment at ScGOVlb_425:1846556..1852720+ Legend: polypeptidestart_codonCDSexonintronstop_codon Hold the cursor over a type above to highlight its positions in the sequence below. >Gvermi12867.t1 ID=Gvermi12867.t1|Name=Gvermi12867.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=mRNA|length=6165bp|location=Sequence derived from alignment at ScGOVlb_425:1846556..1852720+ (Gracilaria vermiculophylla HapMaleFtJ_2017 male) TTGGCCTTCGAGCCGTGCGCCTCGTCGGCCGACTGCCAGGGCGACCGATC
GTGCTCGCAGCTTGCCGGCTCCGCGTCCGGCTCCGTCGATCTCGTCGACT
GCGGCGCCGGCATGTGCTTCTGCACCAGCGCCGACGGCTGCGCCGCCACG
GACGACTGCCTGGACGGCGAGACGTGCGCCAGCTCCACCTGCCTGTCCAA
CTCCTTCGTGCCCGGCGCCGCCGTGCTCGACGACGCCGACCCCGCGCTGG
GCCTCAACCTGGACCCGTGCCAGACCATCTCCGACTGCCAGAACCCGCGC
AACTGCGTGCAGTACGTGGACGGCGTGTTTGGCCAGTGCTCCGGCCCCAA
CTGCTTCTGCATCAAGTTGGACCCGAGCTGCACCTCCGCGTCGCAGTGCT
CGCAGGGTGAGTCGTGCACCAAGCGCGAGAGCGCCAACAACGCCATTTGC
ATCTCCGAGACCGCCGTCATCGCCGATTCCATGGATGAGCAGATCGATGA
CATTCCCGACTCGGGTCCTGCGCTGCCGCCCATGGTGAACGTGCCTGCAA
TGCAGCCCCCAGCCGCGCAGCCTTCTGCCTCGCAGCCGCCTTCCACGCAG
CCGCCTGCCATGCAGCCTGCCGCCACGCAGCCGCCCGCCACGCAGCCGCC
TGCCTCGCAGCCGCCTGCCACGCAGCCGCCTGCCACCTCCACCGCCGCCG
TCGACGTTTCGGAACAACCGCAGGAAGCAGAAACAACCGAAACGGCCGAA
GTGGTGGAAACGCCCGATAGCGAACAGCAAACGCAGCCGCTTCTGCCGCC
GGCTGTGTCCACGCCAGGTGGCGACGAAACGTTGGAAACcatggcgccgg
aagccgaggcgcccacggacacgaccgacgacgacggcggggagcccgcc
acaacggatgaggccgagcaggaggcgtctgaagcggcgcaggcgtctga
agcggagcaggcggacagagaacccgcggtggtggtgccgggtggcgacg
gcgccgccgtgtcgccggactcggagcaaggggcgcaagttttgcccacg
gacgacgcggcggcggtggacgacgaggaggacggcgccattggcgcgtc
gccggtggacgatctgctggacgtggaatcgtcggcggcgcccgaggcgg
acggcgaagacggtggcgcgccggactctgtggaggacgagatctgcatc
ggggagcaccacctggtgcagctggcgcgcgaagagctgctgtacgcgtc
caacagatatgcgcgcgtgctgtgcgatgagcgcaacagctgcgccacgc
cgggccacattgtgacggtgcacgggcgggcgatgatgatggcgacgtac
tgcggcggcacggcgtgcgtgcagagggttatgaaggtgaacagcccgcg
ctacaggcgcgcggccagagtgcgctcgcacacgagcgggctgagcttca
cggcgtttgcggcgcggtacgccacggccgccgaggagcgcgtgctgcgc
acgtttgtgcacatggggctgtgagcggcggccgcggcgacgcgcatgcg
gctcggcgtgcgcgcattttgtgttttcgaacggtgggggaaggggggtg
gggggggggcggacgggcgcgccgcccgactaatcataaagcttatcgtt
gctgcggctgcgcggcgtatgtatgcatggctgcgtgcctgccgctgcgg
ctggtttacagcggccgtcgcgcgcgcgcgcctcacggcgcggcgacgaa
ggcggcggccgtggacaggctgcggcggttcttgtcggcggcgagctcgg
cgaggcgcgcgtacagggcgtcgttgtcgtcgttgtggtcgttgtcgccg
tcggcggggcgcaggcggcgcagcagcgcggcctcgcgcgcgcgcggcgc
ggcggcgtgcacgttggcgctggcaaaggcgggggcgcaggcgaaggcgc
gcagcagcgggcgcaggtcgcggcgcaggcgcggggcgcgcacgacgtag
tcgggcaccagcgcgtcgtacacgcgcagcgcgcgcttgcgcgcgtccac
gtacgggtacgcggccaggaagcggcgctggcgcgcgctgcgcgcggcgg
tgcgcagcgcggcgcgcagctgcgcggcgcccagcgtggcgttgccgtgc
gcgcgcgcctgcgagtacttggccgcgctccacaggcggcggcgcatggg
cgcgcacgacgtgatgtacagcagcatggtgcagcgcgtgcgcagctgct
tgaccgaggtgctgttgaggtacaggtggcgcgtgagcagcgccttgcgc
gccgacggcagcgccagcatgcgcgacacgagctgcgcgcgccgctcggg
cggcgcgtcgcgcggctgcgcgtagccgtggcgccgcaggcacgacagca
gcgcgccgccgatggtggtggacgccgtgcgcggcgggcggtcgtacacg
atgcactgcacgggcgcggcgcggagcgccacgcggcggcggcgcatttc
cggcggcgcgatgcgcccgcggcacgtctccaccgcgtcggcgagcgagc
gcgcggcggcgcagcggcgcaacgtgggcagcgccgccatggcgcacaac
acggcggcgacgcacaatgcgaggcgctgctgcgtgcgcgtgcgcaacgg
ggcggcgagggggcgcaggcgacgcgacatgtgcagcagcagcagcagca
cgaggcgcgtggtgcgggcgcgggcgcaggcgcgacggcgcggcggcggg
cgtgcgccgagggaggcgcgctgcgcgcggcgcttgtttgcgacgcacgc
agctggcgggggggcgcgccacactgcagcgcggcggtgcggaaggaggg
gggagtgcgggcgcgtcgcgagcatttgttggaacagaacagcctgtcgc
gcgaccgcggcggccggtgcgcgcgccatgcggtggacggcgcgccacgg
cgggggggggggggggtgcgctgcgaagcgtgcgctggcgccgtctcgcg
accgcgtttgggcgagcgcgtgtgtatcaacgttgctgacggcggcgcag
ccgatgatgtagcgcacatgcggcgggtaccgcgcgagctgccgcagcga
gcgcgcgcccgcatcgggcggcggcggcggcggcgacgggcgatggctgc
tcaagctcgtgggaggatgggcacggtgcgccattgcgtgcgcggggcga
gcacggaggcaggcgggcgcggcgggcgcgcgcacgcggcgcgcgcacgc
ggcgacgttggcagcattggcagcgggcagcggcggcggcagcgcgcgcg
gctgacggcggcgcgtgccggcgcggcgcgcgcacgcgggcggcgcgagg
cggcgccacctggagcggcgcgggcggcgggcgcgcgccgcgtgcgccac
gtgcgcgcgcgagcgccacgttgcgcgccgtgcgcgcgcgccagtgcgcc
gcgcagcgccgcgcagcgccgccgcccgcatcgccgccgcagcggcgcgc
agcggcgcgccccgccgccgcgcgcgcgcagcgctcccgcgcccgcgccc
gccgccccgcgccccgcgcctgcgcccgccgccgccgtcggcgccgtcgc
gccgccgcgccgccgccgcgcgccacgttccgccagatgcgcgctgccac
ctttcgccgcgcgcgcgctgccgccgcccccgccgcagtataagcgccgt
gcccgtgcccgccgGccccccccccccccccccccccccccccccccccc
cccccccccccccccccccccccccccccccccccccccccccccccccc
cccccccccccccccccccccccccccccccccccccccccNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNgctccatcc
gccatgcctgcccagtcgcacaaccccttctacccttcccggcctgctgc
tgtacactacacaatgcatcccgcctgcatttccacgaacagctctcgtc
tgcccccccgcccccccccccccccccccccccccccccccccccccccc
cccccccccccccccccccccccccccccccccccccccccccccccccc
ccccccccccccccccgccccccccccgcccccccccccccccccccccc
ccccccccTGCGCTCCCCCGCCGCTATCGCCGCCGCCGCTCACCCGCCGC
TATCGCCGCCGCCGCTCACCGCCCCTCCCCCGCCGCGCTCCTCCCCCGCA
AACCGCCGCGCTCCGCCATGGACGCCCTGCCCGACGTCCTCCCCGCCGGC
CGCCGCCCCAGCGCCGACTCCGCCCAGTCCTTCGAGACCGCCGTCTCCTC
CCGCCCCTCCTTCCGCGCACACCACCCCCTCCCCCTCCCCGATCCGCTGC
TCATGGCCCGCCTCACCGCCCTCAACCTCCCCTCCGCCCCCGCCCGCTCC
CCCGCCAACCACCCCAACCGCAACTCCCCCTCCTCGCCGCTCTCCTCCTT
CTCCCCCTCCCTCCCGCGCCGCTTCAGCTCGTGCCATGCGCCGCCCACCA
CGCGCGCCCCCGACCCCGCCCTCGCTGCCTCCGCCCCCATCTCCGCCCAT
ATGCACCGTCTCCCGCCGCTCAGCCCGCTGTCGTCCATGTACGACCCCAA
CTCCACCTCCGCCTCCGCCTCCGATGAGGACGCCTCGTGCTCGTCGTCCA
CCTCATCCGATTGcgagcccgcgccccgcgccccctcccgctccgtcgcc
cgccaccacccgcgcAACCCCAACCTGCTTCGCCCCGACGTTGTCAAcgc
cgccgccgccgccgccgccgccgccgccgccgccccgcGTCAAACGCCGC
TGCGCAAAGCCCAGTCGCAGCGCCACCCGTCCACGGCCCACCTGCCGCCC
GCCCTGCGCCACCGCCTCTCGCTGGACCACCACGCCGACCTCCCCGCGCG
CCCAGCAgccgccccgccgccgctgccgccgccgccgccgccgccgccgc
cgccCACCGCCTGGCACGCCGCCAGCAACTTTGACCTgccgcgcggcaag
gtgcagcacctgcccaccgtgccgcgcccggccacgccgtcgcgcctgcc
gcgccCCAAGGTGTTCATCCGCCAGAACTCCACGCGCCCATCCGTCGTCG
ACGCCGCCGCCGTCAGGCACGTGCGCTGCACCTCGGGCCACTACCTCCCC
GAGCCGCAGCTCGTCGGTCGCCACGTCCCGCTCGCGCCCACGCCCCACTG
CCAGCGCGCGGCCGAGCAGCCGCACCACCCGCAGCCCCCGGTGTGCCACT
TCTCGGCCGAGATCACCAACGTCGCGGACGAGCACATGTACTTCTCGGAC
GAGGACGAGTTCGACTCGCAGGTGCTGGAcgccagcacgccgcccccgtc
gcacaccgccgccgccgacgTGCTGTCCACCAAGGTGCGCCGCGCCGTCA
GCGCCCTGCGCAGCATCTCGTTCCAGTCCAACCAGGGCGAGGACTTCGAC
ACGGCGTGGGGCCAGACGCTGTGCGTGTCGCACGACAAGCAGAGCCCGTC
GCTGGCCAGCCTGGCGTCGGCCAAGTGGCGCCGCGCGCTCAGCCGCTCGC
CCAGTCGCTccgccgccgccgccgccgccgccgcgcgcgccgccgACCAC
GCCCACGCCGCCGACCACGACGCCGCCAGCGCGCGCTCCAGCGCGTCGCT
CGCGTCGGGCAGCCGCGAGCGCTCCGCCAGCGCGCACCACAACGTGCGCG
GCTTCGCCGCGCTGCGCATGCGCGCCAACTTGGGCGGCGCGCACAGGCGC
TCGCTGTGGGCGGGCGCGCGCAGGGAGCGCcagcagcagcagcagccgca
cgcggtcgccgcgcagctgcTCGTGTCGGGCGCCGGCCACGGCTTCCTGG
CCGCGTCCACCGACATGGCCGAGCAGCGCCAGGCGCTGGCCACGGTCGCG
CCGCCGCCGGACGCGCTGGACGGCCCCAACTCCGTGCAGAAGGGCTCGGT
GGACAAGTACGTGGAGTTCATCCACGCCTCGGCGCAGCGCGAGACCAAGG
GCCGCTTCGGCCCGCGCAACTTGCCAAGTCGCGTGCTCAGGCTGTTCCGA
AGAAAGTGGAACTAG back to topCoding sequence (CDS) from alignment at ScGOVlb_425:1846556..1852720+ >Gvermi12867.t1 ID=Gvermi12867.t1|Name=Gvermi12867.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=CDS|length=1665bp|location=Sequence derived from alignment at ScGOVlb_425:1846556..1852720+ (Gracilaria vermiculophylla HapMaleFtJ_2017 male) TTGGCCTTCGAGCCGTGCGCCTCGTCGGCCGACTGCCAGGGCGACCGATC GTGCTCGCAGCTTGCCGGCTCCGCGTCCGGCTCCGTCGATCTCGTCGACT GCGGCGCCGGCATGTGCTTCTGCACCAGCGCCGACGGCTGCGCCGCCACG GACGACTGCCTGGACGGCGAGACGTGCGCCAGCTCCACCTGCCTGTCCAA CTCCTTCGTGCCCGGCGCCGCCGTGCTCGACGACGCCGACCCCGCGCTGG GCCTCAACCTGGACCCGTGCCAGACCATCTCCGACTGCCAGAACCCGCGC AACTGCGTGCAGTACGTGGACGGCGTGTTTGGCCAGTGCTCCGGCCCCAA CTGCTTCTGCATCAAGTTGGACCCGAGCTGCACCTCCGCGTCGCAGTGCT CGCAGGGTGAGTCGTGCACCAAGCGCGAGAGCGCCAACAACGCCATTTGC ATCTCCGAGACCGCCGTCATCGCCGATTCCATGGATGAGCAGATCGATGA CATTCCCGACTCGGGTCCTGCGCTGCCGCCCATGGTGAACGTGCCTGCAA TGCAGCCCCCAGCCGCGCAGCCTTCTGCCTCGCAGCCGCCTTCCACGCAG CCGCCTGCCATGCAGCCTGCCGCCACGCAGCCGCCCGCCACGCAGCCGCC TGCCTCGCAGCCGCCTGCCACGCAGCCGCCTGCCACCTCCACCGCCGCCG TCGACGTTTCGGAACAACCGCAGGAAGCAGAAACAACCGAAACGGCCGAA GTGGTGGAAACGCCCGATAGCGAACAGCAAACGCAGCCGCTTCTGCCGCC GGCTCGCGCGGCCGAGCAGCCGCACCACCCGCAGCCCCCGGTGTGCCACT TCTCGGCCGAGATCACCAACGTCGCGGACGAGCACATGTACTTCTCGGAC GAGGACGAGTTCGACTCGCAGGTGCTGGAcgccagcacgccgcccccgtc gcacaccgccgccgccgacgTGCTGTCCACCAAGGTGCGCCGCGCCGTCA GCGCCCTGCGCAGCATCTCGTTCCAGTCCAACCAGGGCGAGGACTTCGAC ACGGCGTGGGGCCAGACGCTGTGCGTGTCGCACGACAAGCAGAGCCCGTC GCTGGCCAGCCTGGCGTCGGCCAAGTGGCGCCGCGCGCTCAGCCGCTCGC CCAGTCGCTccgccgccgccgccgccgccgccgcgcgcgccgccgACCAC GCCCACGCCGCCGACCACGACGCCGCCAGCGCGCGCTCCAGCGCGTCGCT CGCGTCGGGCAGCCGCGAGCGCTCCGCCAGCGCGCACCACAACGTGCGCG GCTTCGCCGCGCTGCGCATGCGCGCCAACTTGGGCGGCGCGCACAGGCGC TCGCTGTGGGCGGGCGCGCGCAGGGAGCGCcagcagcagcagcagccgca cgcggtcgccgcgcagctgcTCGTGTCGGGCGCCGGCCACGGCTTCCTGG CCGCGTCCACCGACATGGCCGAGCAGCGCCAGGCGCTGGCCACGGTCGCG CCGCCGCCGGACGCGCTGGACGGCCCCAACTCCGTGCAGAAGGGCTCGGT GGACAAGTACGTGGAGTTCATCCACGCCTCGGCGCAGCGCGAGACCAAGG GCCGCTTCGGCCCGCGCAACTTGCCAAGTCGCGTGCTCAGGCTGTTCCGA AGAAAGTGGAACTAG back to top
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