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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Seed ortholog | 130081.XP_005709346.1 |
| PFAMs | PBD,PH,Pkinase |
| Max annot lvl | 2759|Eukaryota |
| KEGG ko | ko:K04409,ko:K08286 |
| KEGG Pathway | ko04010,ko04011,ko04012,ko04014,ko04024,ko04062,ko04360,ko04392,ko04510,ko04650,ko04660,ko04666,ko04810,ko05120,ko05205,ko05211,map04010,map04011,map04012,map04014,map04024,map04062,map04360,map04392,map04510,map04650,map04660,map04666,map04810,map05120,map05205,map05211 |
| GOs | GO:0000278,GO:0000281,GO:0000910,GO:0001891,GO:0001932,GO:0001934,GO:0003674,GO:0003779,GO:0003824,GO:0004672,GO:0004674,GO:0004683,GO:0005488,GO:0005515,GO:0005543,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005856,GO:0005886,GO:0005938,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006897,GO:0006907,GO:0006909,GO:0006928,GO:0006935,GO:0006950,GO:0006996,GO:0007010,GO:0007049,GO:0007154,GO:0007163,GO:0007165,GO:0007264,GO:0007265,GO:0007266,GO:0007346,GO:0008092,GO:0008104,GO:0008150,GO:0008152,GO:0008289,GO:0009267,GO:0009605,GO:0009893,GO:0009966,GO:0009987,GO:0009991,GO:0010562,GO:0010564,GO:0010604,GO:0010646,GO:0016020,GO:0016043,GO:0016192,GO:0016301,GO:0016310,GO:0016477,GO:0016740,GO:0016772,GO:0016773,GO:0016905,GO:0017016,GO:0017022,GO:0017048,GO:0019220,GO:0019222,GO:0019538,GO:0019899,GO:0022402,GO:0022607,GO:0023014,GO:0023051,GO:0023052,GO:0030010,GO:0030029,GO:0030036,GO:0030100,GO:0030587,GO:0031033,GO:0031034,GO:0031036,GO:0031038,GO:0031098,GO:0031152,GO:0031156,GO:0031252,GO:0031254,GO:0031267,GO:0031272,GO:0031273,GO:0031323,GO:0031325,GO:0031344,GO:0031345,GO:0031399,GO:0031401,GO:0031667,GO:0031668,GO:0031669,GO:0032147,GO:0032153,GO:0032154,GO:0032155,GO:0032268,GO:0032270,GO:0032465,GO:0032467,GO:0032502,GO:0032781,GO:0032879,GO:0033036,GO:0033554,GO:0033674,GO:0034613,GO:0034622,GO:0035556,GO:0036211,GO:0040011,GO:0042221,GO:0042325,GO:0042327,GO:0042330,GO:0042594,GO:0043085,GO:0043167,GO:0043168,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043327,GO:0043408,GO:0043412,GO:0043462,GO:0043549,GO:0043900,GO:0043933,GO:0044085,GO:0044087,GO:0044093,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0044764,GO:0044877,GO:0045159,GO:0045787,GO:0045807,GO:0045859,GO:0045860,GO:0045937,GO:0046777,GO:0048365,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048856,GO:0048870,GO:0050764,GO:0050766,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0050896,GO:0051015,GO:0051020,GO:0051049,GO:0051050,GO:0051128,GO:0051129,GO:0051130,GO:0051171,GO:0051173,GO:0051174,GO:0051179,GO:0051234,GO:0051246,GO:0051247,GO:0051301,GO:0051302,GO:0051336,GO:0051338,GO:0051345,GO:0051347,GO:0051641,GO:0051674,GO:0051703,GO:0051704,GO:0051716,GO:0051726,GO:0051781,GO:0060255,GO:0060491,GO:0060627,GO:0061640,GO:0065003,GO:0065007,GO:0065009,GO:0070727,GO:0071496,GO:0071704,GO:0071840,GO:0071944,GO:0080090,GO:0090068,GO:0090702,GO:0097204,GO:0098590,GO:0098630,GO:0098657,GO:0098743,GO:0099120,GO:0099568,GO:0120032,GO:0120033,GO:0120035,GO:0140096,GO:1901564,GO:1902463,GO:1902531,GO:1903047 |
| Evalue | 5.75e-82 |
| EggNOG OGs | KOG0578@1|root,KOG0578@2759|Eukaryota |
| EC | 2.7.11.1 |
| Description | Rac GTPase binding |
| COG category | F |
| BRITE | ko00000,ko00001,ko01000,ko01001,ko03036,ko04131 |
Relationships
This mRNA is a part of the following gene feature(s):
The following start_codon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following stop_codon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Gvermi12710.t1 ID=Gvermi12710.t1|Name=Gvermi12710.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=mRNA|length=643bp MQRKIMWGKESLGSPPSVHVSEPSDFRLVAHVEYDGDQGNLKGIEEFMAR ATIPRGRRSPNNKASGPSLPLPPLRSLGEHFAQMASRESSPISTPSESPV RKSRLTPETARASAANRTTGYGAAIKSPLGVQRRLSPASKRQVSRPLRTK HEVHVVVDPTNPTGFAGLPKAWETILMYSGILPDEAAANPKAVIDVLNFS KTTDPALGERQQFRDSLLRTLPPIVLEDMEVPSMTSFDDDTDEAISRSDS YQQETPARALPSTPTANHARETDGMARFSPLADIENCVQPSSRSPSPRKD AQTCVVNELDSDYMESFIGAERRQNLPGAIPENLEAYFRQDDPHKLFKRM RHIGEGSCGNVYRAVDRDGRFVALKKVKPVNERDWKLYKFEAQVMQDYRD SENLVKCFDAFRSGNELWIVMEYVSAGTLSDLLLGKRMPKCNAQHHRPSA SSSQAVLVQPLEESVIAYICREVLKGLKSLHSTSRVHRDIKGENVLLDMD GSVKVADFGFCAELSKQAGKRNTVVGTPFWMAPEVIRGCNYDCKIDIWST GVLAFECAEGRPPHMGVSPIRAMFLIATQGAPALSNEQQWSSELRDFIGT CCTIKAVDRPSVHEALSHPFIAKACEQAYAAVFFGEALEQRT* back to topspliced messenger RNA >Gvermi12710.t1 ID=Gvermi12710.t1|Name=Gvermi12710.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=mRNA|length=1929bp|location=Sequence derived from alignment at ScGOVlb_425:1096270..1098198+ (Gracilaria vermiculophylla HapMaleFtJ_2017 male)|Notes=Excludes all bases but those of type(s): exon.
ATGCAGCGCAAAATCATGTGGGGCAAAGAAAGCCTGGGTTCTCCCCCCTC TGTACATGTCTCGGAGCCGTCCGACTTCCGCCTCGTTGCGCACGTGGAAT ACGACGGCGACCAAGGCAACTTGAAGGGCATCGAGGAGTTCATGGCGCGT GCGACGATCCCTCGCGGCCGACGCAGCCCGAACAACAAAGCTTCCGGCCC GTCGTTGCCCCTCCCCCCTCTGCGAAGCCTTGGCGAGCACTTTGCGCAAA TGGCCAGTCGGGAGTCGTCTCCGATTTCAACCCCCAGTGAATCTCCAGTG CGCAAATCGCGACTCACTCCAGAAACCGCCCGTGCGTCGGCGGCAAACCG AACAACCGGCTACGGCGCTGCCATCAAGTCGCCTTTGGGAGTGCAGCGAC GACTGTCGCCCGCGTCAAAAAGACAGGTGTCGCGCCCGCTCCGAACAAAA CACGAGGTTCACGTCGTTGTTGATCCCACAAATCCCACTGGGTTCGCCGG CTTGCCAAAGGCTTGGGAGACAATACTGATGTACTCTGGCATATTGCCGG ATGAGGCTGCTGCGAACCCGAAGGCCGTTATCGATGTTCTCAACTTCTCG AAGACAACTGATCCCGCCTTGGGGGAAAGACAGCAATTTCGTGACTCGCT GTTGAGAACTCTCCCTCCGATAGTTCTGGAAGACATGGAAGTCCCAAGCA TGACCTCCTTTGATGACGACACCGATGAAGCTATCAGTCGATCGGATAGT TACCAACAAGAAACCCCCGCAAGAGCTTTGCCAAGCACCCCGACAGCAAA TCATGCTCGAGAGACCGATGGAATGGCACGTTTCTCACCCCTCGCGGATA TTGAAAACTGTGTCCAACCATCTTCTCGGTCGCCCTCGCCGCGCAAAGAT GCGCAAACATGCGTGGTCAATGAATTGGATTCTGACTATATGGAGAGTTT CATCGGTGCTGAAAGGCGCCAAAACCTCCCTGGCGCCATTCCAGAAAATC TGGAGGCCTACTTTCGGCAAGATGACCCACACAAGCTGTTCAAACGGATG AGGCATATCGGAGAGGGCTCTTGCGGGAACGTATACCGCGCAGTTGACAG AGACGGGCGATTTGTGGCGTTGAAGAAAGTCAAGCCCGTGAATGAACGCG ACTGGAAGCTGTACAAATTCGAAGCACAAGTAATGCAAGACTATCGCGAC TCCGAAAACCTGGTGAAGTGCTTTGATGCTTTTCGATCGGGGAACGAGCT TTGGATTGTCATGGAGTATGTCTCAGCAGGAACTTTATCCGATTTACTAC TCGGAAAACGCATGCCCAAATGCAACGCGCAGCACCACCGCCCGAGCGCC TCATCGTCTCAAGCAGTGCTGGTACAGCCATTGGAAGAGAGCGTGATTGC GTACATATGTCGCGAAGTTCTTAAAGGACTAAAGAGTTTGCACTCTACCA GCCGAGTGCATCGCGATATTAAGGGGGAAAACGTGCTACTCGATATGGAC GGATCGGTTAAAGTAGCGGACTTTGGGTTTTGTGCTGAGTTGTCGAAACA GGCTGGGAAGCGTAATACGGTCGTTGGAACTCCCTTTTGGATGGCACCCG AAGTGATCCGCGGCTGCAACTACGACTGCAAAATAGATATTTGGTCAACG GGAGTGCTGGCTTTCGAGTGCGCGGAGGGGAGGCCACCACACATGGGTGT GTCACCGATCCGAGCTATGTTCTTAATAGCAACTCAAGGCGCTCCAGCGT TATCCAACGAGCAGCAATGGTCGTCAGAGTTGCGAGATTTTATTGGCACC TGCTGCACCATCAAGGCCGTGGATCGACCCTCTGTGCACGAAGCGTTGTC TCACCCGTTCATTGCCAAAGCGTGTGAGCAGGCTTACGCCGCAGTGTTTT TTGGAGAGGCCTTGGAGCAAAGAACGTGA back to topprotein sequence of Gvermi12710.t1 >Gvermi12710.t1 ID=Gvermi12710.t1|Name=Gvermi12710.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=643bp
MQRKIMWGKESLGSPPSVHVSEPSDFRLVAHVEYDGDQGNLKGIEEFMAR ATIPRGRRSPNNKASGPSLPLPPLRSLGEHFAQMASRESSPISTPSESPV RKSRLTPETARASAANRTTGYGAAIKSPLGVQRRLSPASKRQVSRPLRTK HEVHVVVDPTNPTGFAGLPKAWETILMYSGILPDEAAANPKAVIDVLNFS KTTDPALGERQQFRDSLLRTLPPIVLEDMEVPSMTSFDDDTDEAISRSDS YQQETPARALPSTPTANHARETDGMARFSPLADIENCVQPSSRSPSPRKD AQTCVVNELDSDYMESFIGAERRQNLPGAIPENLEAYFRQDDPHKLFKRM RHIGEGSCGNVYRAVDRDGRFVALKKVKPVNERDWKLYKFEAQVMQDYRD SENLVKCFDAFRSGNELWIVMEYVSAGTLSDLLLGKRMPKCNAQHHRPSA SSSQAVLVQPLEESVIAYICREVLKGLKSLHSTSRVHRDIKGENVLLDMD GSVKVADFGFCAELSKQAGKRNTVVGTPFWMAPEVIRGCNYDCKIDIWST GVLAFECAEGRPPHMGVSPIRAMFLIATQGAPALSNEQQWSSELRDFIGT CCTIKAVDRPSVHEALSHPFIAKACEQAYAAVFFGEALEQRT* back to topmRNA from alignment at ScGOVlb_425:1096270..1098198+ Legend: start_codonpolypeptideCDSexonstop_codon Hold the cursor over a type above to highlight its positions in the sequence below. >Gvermi12710.t1 ID=Gvermi12710.t1|Name=Gvermi12710.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=mRNA|length=1929bp|location=Sequence derived from alignment at ScGOVlb_425:1096270..1098198+ (Gracilaria vermiculophylla HapMaleFtJ_2017 male) ATGCAGCGCAAAATCATGTGGGGCAAAGAAAGCCTGGGTTCTCCCCCCTC
TGTACATGTCTCGGAGCCGTCCGACTTCCGCCTCGTTGCGCACGTGGAAT
ACGACGGCGACCAAGGCAACTTGAAGGGCATCGAGGAGTTCATGGCGCGT
GCGACGATCCCTCGCGGCCGACGCAGCCCGAACAACAAAGCTTCCGGCCC
GTCGTTGCCCCTCCCCCCTCTGCGAAGCCTTGGCGAGCACTTTGCGCAAA
TGGCCAGTCGGGAGTCGTCTCCGATTTCAACCCCCAGTGAATCTCCAGTG
CGCAAATCGCGACTCACTCCAGAAACCGCCCGTGCGTCGGCGGCAAACCG
AACAACCGGCTACGGCGCTGCCATCAAGTCGCCTTTGGGAGTGCAGCGAC
GACTGTCGCCCGCGTCAAAAAGACAGGTGTCGCGCCCGCTCCGAACAAAA
CACGAGGTTCACGTCGTTGTTGATCCCACAAATCCCACTGGGTTCGCCGG
CTTGCCAAAGGCTTGGGAGACAATACTGATGTACTCTGGCATATTGCCGG
ATGAGGCTGCTGCGAACCCGAAGGCCGTTATCGATGTTCTCAACTTCTCG
AAGACAACTGATCCCGCCTTGGGGGAAAGACAGCAATTTCGTGACTCGCT
GTTGAGAACTCTCCCTCCGATAGTTCTGGAAGACATGGAAGTCCCAAGCA
TGACCTCCTTTGATGACGACACCGATGAAGCTATCAGTCGATCGGATAGT
TACCAACAAGAAACCCCCGCAAGAGCTTTGCCAAGCACCCCGACAGCAAA
TCATGCTCGAGAGACCGATGGAATGGCACGTTTCTCACCCCTCGCGGATA
TTGAAAACTGTGTCCAACCATCTTCTCGGTCGCCCTCGCCGCGCAAAGAT
GCGCAAACATGCGTGGTCAATGAATTGGATTCTGACTATATGGAGAGTTT
CATCGGTGCTGAAAGGCGCCAAAACCTCCCTGGCGCCATTCCAGAAAATC
TGGAGGCCTACTTTCGGCAAGATGACCCACACAAGCTGTTCAAACGGATG
AGGCATATCGGAGAGGGCTCTTGCGGGAACGTATACCGCGCAGTTGACAG
AGACGGGCGATTTGTGGCGTTGAAGAAAGTCAAGCCCGTGAATGAACGCG
ACTGGAAGCTGTACAAATTCGAAGCACAAGTAATGCAAGACTATCGCGAC
TCCGAAAACCTGGTGAAGTGCTTTGATGCTTTTCGATCGGGGAACGAGCT
TTGGATTGTCATGGAGTATGTCTCAGCAGGAACTTTATCCGATTTACTAC
TCGGAAAACGCATGCCCAAATGCAACGCGCAGCACCACCGCCCGAGCGCC
TCATCGTCTCAAGCAGTGCTGGTACAGCCATTGGAAGAGAGCGTGATTGC
GTACATATGTCGCGAAGTTCTTAAAGGACTAAAGAGTTTGCACTCTACCA
GCCGAGTGCATCGCGATATTAAGGGGGAAAACGTGCTACTCGATATGGAC
GGATCGGTTAAAGTAGCGGACTTTGGGTTTTGTGCTGAGTTGTCGAAACA
GGCTGGGAAGCGTAATACGGTCGTTGGAACTCCCTTTTGGATGGCACCCG
AAGTGATCCGCGGCTGCAACTACGACTGCAAAATAGATATTTGGTCAACG
GGAGTGCTGGCTTTCGAGTGCGCGGAGGGGAGGCCACCACACATGGGTGT
GTCACCGATCCGAGCTATGTTCTTAATAGCAACTCAAGGCGCTCCAGCGT
TATCCAACGAGCAGCAATGGTCGTCAGAGTTGCGAGATTTTATTGGCACC
TGCTGCACCATCAAGGCCGTGGATCGACCCTCTGTGCACGAAGCGTTGTC
TCACCCGTTCATTGCCAAAGCGTGTGAGCAGGCTTACGCCGCAGTGTTTT
TTGGAGAGGCCTTGGAGCAAAGAACGTGA back to topCoding sequence (CDS) from alignment at ScGOVlb_425:1096270..1098198+ >Gvermi12710.t1 ID=Gvermi12710.t1|Name=Gvermi12710.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=CDS|length=1929bp|location=Sequence derived from alignment at ScGOVlb_425:1096270..1098198+ (Gracilaria vermiculophylla HapMaleFtJ_2017 male) ATGCAGCGCAAAATCATGTGGGGCAAAGAAAGCCTGGGTTCTCCCCCCTC TGTACATGTCTCGGAGCCGTCCGACTTCCGCCTCGTTGCGCACGTGGAAT ACGACGGCGACCAAGGCAACTTGAAGGGCATCGAGGAGTTCATGGCGCGT GCGACGATCCCTCGCGGCCGACGCAGCCCGAACAACAAAGCTTCCGGCCC GTCGTTGCCCCTCCCCCCTCTGCGAAGCCTTGGCGAGCACTTTGCGCAAA TGGCCAGTCGGGAGTCGTCTCCGATTTCAACCCCCAGTGAATCTCCAGTG CGCAAATCGCGACTCACTCCAGAAACCGCCCGTGCGTCGGCGGCAAACCG AACAACCGGCTACGGCGCTGCCATCAAGTCGCCTTTGGGAGTGCAGCGAC GACTGTCGCCCGCGTCAAAAAGACAGGTGTCGCGCCCGCTCCGAACAAAA CACGAGGTTCACGTCGTTGTTGATCCCACAAATCCCACTGGGTTCGCCGG CTTGCCAAAGGCTTGGGAGACAATACTGATGTACTCTGGCATATTGCCGG ATGAGGCTGCTGCGAACCCGAAGGCCGTTATCGATGTTCTCAACTTCTCG AAGACAACTGATCCCGCCTTGGGGGAAAGACAGCAATTTCGTGACTCGCT GTTGAGAACTCTCCCTCCGATAGTTCTGGAAGACATGGAAGTCCCAAGCA TGACCTCCTTTGATGACGACACCGATGAAGCTATCAGTCGATCGGATAGT TACCAACAAGAAACCCCCGCAAGAGCTTTGCCAAGCACCCCGACAGCAAA TCATGCTCGAGAGACCGATGGAATGGCACGTTTCTCACCCCTCGCGGATA TTGAAAACTGTGTCCAACCATCTTCTCGGTCGCCCTCGCCGCGCAAAGAT GCGCAAACATGCGTGGTCAATGAATTGGATTCTGACTATATGGAGAGTTT CATCGGTGCTGAAAGGCGCCAAAACCTCCCTGGCGCCATTCCAGAAAATC TGGAGGCCTACTTTCGGCAAGATGACCCACACAAGCTGTTCAAACGGATG AGGCATATCGGAGAGGGCTCTTGCGGGAACGTATACCGCGCAGTTGACAG AGACGGGCGATTTGTGGCGTTGAAGAAAGTCAAGCCCGTGAATGAACGCG ACTGGAAGCTGTACAAATTCGAAGCACAAGTAATGCAAGACTATCGCGAC TCCGAAAACCTGGTGAAGTGCTTTGATGCTTTTCGATCGGGGAACGAGCT TTGGATTGTCATGGAGTATGTCTCAGCAGGAACTTTATCCGATTTACTAC TCGGAAAACGCATGCCCAAATGCAACGCGCAGCACCACCGCCCGAGCGCC TCATCGTCTCAAGCAGTGCTGGTACAGCCATTGGAAGAGAGCGTGATTGC GTACATATGTCGCGAAGTTCTTAAAGGACTAAAGAGTTTGCACTCTACCA GCCGAGTGCATCGCGATATTAAGGGGGAAAACGTGCTACTCGATATGGAC GGATCGGTTAAAGTAGCGGACTTTGGGTTTTGTGCTGAGTTGTCGAAACA GGCTGGGAAGCGTAATACGGTCGTTGGAACTCCCTTTTGGATGGCACCCG AAGTGATCCGCGGCTGCAACTACGACTGCAAAATAGATATTTGGTCAACG GGAGTGCTGGCTTTCGAGTGCGCGGAGGGGAGGCCACCACACATGGGTGT GTCACCGATCCGAGCTATGTTCTTAATAGCAACTCAAGGCGCTCCAGCGT TATCCAACGAGCAGCAATGGTCGTCAGAGTTGCGAGATTTTATTGGCACC TGCTGCACCATCAAGGCCGTGGATCGACCCTCTGTGCACGAAGCGTTGTC TCACCCGTTCATTGCCAAAGCGTGTGAGCAGGCTTACGCCGCAGTGTTTT TTGGAGAGGCCTTGGAGCAAAGAACGTGA back to top
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