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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following start_codon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following stop_codon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Gvermi12462.t1 ID=Gvermi12462.t1|Name=Gvermi12462.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=mRNA|length=906bp MDDHNRNIERDENRGSTNQEHNGSGNSQYGEQSVYDLSIRNQNFRESEDG HEQTLSLEGTLESLRQRIEDDDPEATAQYADLMVSISQESPSELVYGMHL YLRAWELGYQHSAAQITNMADILTSGTLSIRASGVHASHLYMLAGQQGYA RALLNHGVLLLRGGPGINRNINEAVQLIASAAERGHERALINLAILIEEE ISLEGLDIPRIVRLLEQAEDGGNQHVLNGLGHIMMNGGVGIRTDIQRAVC LFERAIQSGSTLALRFLGTLLVGGFDEVPTDIPRAVRLYERAVENQDSIA AELLARILVDGVGNVQSNAPRAEQLFRMAIENGSISARSSLAELLIEGAE GVERNPPEAVRLLEDAVQLAGDTTSMMSLGLLLIEGGDGIQKNPERGMSF LERAVAQEDANATLVLGLVLATGTDDIPRNTSRAIRLLEQAIGLGCVDAL LCLAKMLFFGAEGVRKNPTRCVSLLERAVRAENYEAMEFLAFILSNGADG IAADPFRAVSLYEKAIEEGNRETSLVDLGVLLFKGADGLPRDPLRAYAFF QKAAENLEEVGMCNAAVMLVAGVDGIPKDKPRAIDLYEKAIEVKNSAMAK VSLSMFLWVEGQTLQRAVRLCEEAVDEEYVPAFAVLALYLRIGCGFMARD IQRAMYLCERASMDEDEATHLLTMANLCTEGENNLYVDGNAGVEAYEALL GHEKDVTKMVWVKICLRDSYTTLPFRGWRHGVMPENEVVLNAVTLAMVNY ASLLIDGLEGVPRNASKAIQLYRAAIEDDGCIVAMTNLAYLLCTPSLGVG VDSDGEEAIRLLERAIGVSKPHNNVTAMLVLANYLVDDANDEHKNAHRAA ELYGAVVGDTNDAYAFNKLYNLLACGAEGFAADGESADALLVSARECGVE IRRGG* back to topspliced messenger RNA >Gvermi12462.t1 ID=Gvermi12462.t1|Name=Gvermi12462.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=mRNA|length=2718bp|location=Sequence derived from alignment at ScGOVlb_3404:4931607..4934324+ (Gracilaria vermiculophylla HapMaleFtJ_2017 male)|Notes=Excludes all bases but those of type(s): exon.
ATGGATGACCATAATCGTAATATCGAGAGAGATGAGAATCGTGGAAGCAC TAATCAGGAGCACAATGGATCTGGAAATTCGCAATACGGAGAACAAAGTG TTTATGATCTTTCCATAAGAAACCAAAACTTTCGAGAAAGCGAAGACGGA CATGAACAAACCTTATCACTGGAGGGGACCCTTGAGTCTCTTCGTCAACG AATTGAAGATGATGATCCCGAAGCGACGGCCCAATACGCAGATTTGATGG TTTCGATCAGCCAAGAGTCGCCCTCGGAACTGGTGTACGGAATGCATCTT TACCTTCGTGCCTGGGAACTTGGATATCAACACAGCGCTGCTCAGATCAC AAACATGGCTGATATTTTAACATCAGGAACGCTATCGATACGTGCCAGTG GTGTGCATGCAAGTCATCTGTACATGCTTGCTGGTCAACAGGGATACGCC AGAGCGTTGCTTAACCATGGTGTGTTGCTCCTTCGAGGTGGACCTGGTAT CAACAGAAATATCAACGAAGCTGTTCAACTAATTGCATCTGCAGCAGAGA GAGGCCATGAGCGTGCGCTCATAAACCTGGCTATTCTGATTGAAGAAGAA ATATCACTGGAAGGACTTGACATACCCCGCATTGTCAGATTGCTGGAACA AGCCGAAGATGGCGGCAATCAACACGTTCTAAACGGCCTGGGCCATATTA TGATGAACGGCGGGGTAGGGATTCGGACAGACATTCAGCGAGCTGTATGT CTATTTGAAAGGGCGATCCAATCAGGAAGCACGCTGGCATTAAGATTTCT TGGGACTCTTCTGGTAGGAGGCTTTGATGAGGTTCCGACGGATATTCCTC GTGCTGTGCGATTGTATGAGCGGGCTGTTGAGAACCAGGACTCAATTGCT GCTGAGCTTCTGGCTCGTATTTTGGTTGATGGGGTTGGAAATGTGCAAAG CAACGCCCCACGAGCTGAGCAGCTGTTCAGAATGGCGATTGAAAACGGAA GTATTTCAGCGAGATCTAGTTTAGCTGAACTGCTCATAGAGGGAGCTGAA GGGGTGGAACGTAATCCACCAGAAGCCGTGAGATTACTTGAAGATGCGGT TCAGCTAGCAGGTGACACCACTAGCATGATGAGTCTAGGACTCCTTCTCA TCGAAGGCGGAGATGGCATTCAAAAGAACCCAGAACGTGGAATGAGCTTT TTGGAAAGAGCTGTTGCGCAGGAAGATGCAAATGCCACACTGGTCTTAGG ACTTGTTTTGGCCACAGGCACTGACGATATTCCCCGAAACACCAGCAGGG CAATTCGGTTGCTCGAGCAAGCAATCGGCTTAGGTTGCGTCGACGCGCTT TTGTGCCTTGCGAAAATGTTATTCTTCGGCGCAGAGGGCGTCAGAAAGAA CCCGACCAGATGTGTTTCATTGCTTGAAAGAGCGGTCCGTGCGGAAAATT ATGAAGCCATGGAATTTCTGGCATTTATACTTAGTAATGGAGCAGATGGA ATTGCTGCCGATCCTTTTCGCGCCGTAAGCCTTTACGAGAAAGCTATCGA AGAGGGGAACAGAGAGACGTCATTGGTAGACCTCGGGGTACTTTTATTCA AAGGAGCTGACGGCCTTCCAAGAGACCCTTTGCGAGCATATGCGTTTTTC CAAAAGGCCGCAGAAAACCTTGAAGAAGTTGGTATGTGCAACGCTGCAGT GATGCTTGTCGCTGGCGTCGACGGGATTCCAAAGGACAAACCTAGAGCAA TTGATCTGTATGAGAAAGCTATTGAGGTAAAAAATTCGGCAATGGCCAAG GTTTCCTTGTCCATGTTTCTCTGGGTTGAAGGGCAGACTCTGCAACGCGC TGTCCGGTTGTGTGAGGAGGCGGTTGATGAAGAATACGTACCTGCTTTTG CGGTGTTGGCTTTGTATCTAAGAATAGGGTGCGGATTTATGGCAAGGGAT ATACAGAGGGCGATGTATTTGTGCGAAAGAGCGTCAATGGACGAAGATGA AGCTACACATTTGCTGACGATGGCCAATTTGTGTACGGAAGGAGAGAATA ATTTGTACGTTGACGGGAACGCAGGTGTGGAAGCGTATGAAGCGTTACTT GGCCATGAAAAGGATGTGACCAAAATGGTGTGGGTGAAAATTTGTCTTCG GGACTCTTACACTACGCTGCCGTTTCGAGGGTGGCGTCATGGTGTCATGC CCGAGAATGAAGTTGTTCTGAATGCGGTAACGCTAGCCATGGTGAACTAC GCCAGCCTTCTCATCGACGGTTTGGAAGGGGTGCCGAGAAATGCGTCAAA AGCGATTCAGCTGTACCGCGCCGCCATCGAAGATGACGGGTGTATCGTGG CCATGACAAATCTTGCGTATCTGTTGTGCACACCGTCGCTGGGAGTTGGT GTTGACTCGGACGGTGAAGAAGCGATAAGATTACTGGAGAGGGCTATCGG GGTGTCTAAGCCGCACAACAATGTGACGGCAATGCTTGTGCTTGCCAATT ACCTCGTGGATGATGCAAACGACGAGCACAAGAATGCTCATCGTGCGGCG GAACTGTACGGCGCAGTCGTTGGCGACACAAACGACGCTTACGCTTTCAA CAAGCTGTACAATCTGCTGGCGTGCGGCGCTGAGGGATTTGCGGCGGACG GCGAAAGTGCCGACGCTCTACTCGTCAGCGCGCGGGAATGCGGAGTGGAG ATAAGAAGAGGGGGCTGA back to topprotein sequence of Gvermi12462.t1 >Gvermi12462.t1 ID=Gvermi12462.t1|Name=Gvermi12462.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=906bp
MDDHNRNIERDENRGSTNQEHNGSGNSQYGEQSVYDLSIRNQNFRESEDG HEQTLSLEGTLESLRQRIEDDDPEATAQYADLMVSISQESPSELVYGMHL YLRAWELGYQHSAAQITNMADILTSGTLSIRASGVHASHLYMLAGQQGYA RALLNHGVLLLRGGPGINRNINEAVQLIASAAERGHERALINLAILIEEE ISLEGLDIPRIVRLLEQAEDGGNQHVLNGLGHIMMNGGVGIRTDIQRAVC LFERAIQSGSTLALRFLGTLLVGGFDEVPTDIPRAVRLYERAVENQDSIA AELLARILVDGVGNVQSNAPRAEQLFRMAIENGSISARSSLAELLIEGAE GVERNPPEAVRLLEDAVQLAGDTTSMMSLGLLLIEGGDGIQKNPERGMSF LERAVAQEDANATLVLGLVLATGTDDIPRNTSRAIRLLEQAIGLGCVDAL LCLAKMLFFGAEGVRKNPTRCVSLLERAVRAENYEAMEFLAFILSNGADG IAADPFRAVSLYEKAIEEGNRETSLVDLGVLLFKGADGLPRDPLRAYAFF QKAAENLEEVGMCNAAVMLVAGVDGIPKDKPRAIDLYEKAIEVKNSAMAK VSLSMFLWVEGQTLQRAVRLCEEAVDEEYVPAFAVLALYLRIGCGFMARD IQRAMYLCERASMDEDEATHLLTMANLCTEGENNLYVDGNAGVEAYEALL GHEKDVTKMVWVKICLRDSYTTLPFRGWRHGVMPENEVVLNAVTLAMVNY ASLLIDGLEGVPRNASKAIQLYRAAIEDDGCIVAMTNLAYLLCTPSLGVG VDSDGEEAIRLLERAIGVSKPHNNVTAMLVLANYLVDDANDEHKNAHRAA ELYGAVVGDTNDAYAFNKLYNLLACGAEGFAADGESADALLVSARECGVE IRRGG* back to topmRNA from alignment at ScGOVlb_3404:4931607..4934324+ Legend: start_codonpolypeptideCDSexonstop_codon Hold the cursor over a type above to highlight its positions in the sequence below. >Gvermi12462.t1 ID=Gvermi12462.t1|Name=Gvermi12462.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=mRNA|length=2718bp|location=Sequence derived from alignment at ScGOVlb_3404:4931607..4934324+ (Gracilaria vermiculophylla HapMaleFtJ_2017 male) ATGGATGACCATAATCGTAATATCGAGAGAGATGAGAATCGTGGAAGCAC
TAATCAGGAGCACAATGGATCTGGAAATTCGCAATACGGAGAACAAAGTG
TTTATGATCTTTCCATAAGAAACCAAAACTTTCGAGAAAGCGAAGACGGA
CATGAACAAACCTTATCACTGGAGGGGACCCTTGAGTCTCTTCGTCAACG
AATTGAAGATGATGATCCCGAAGCGACGGCCCAATACGCAGATTTGATGG
TTTCGATCAGCCAAGAGTCGCCCTCGGAACTGGTGTACGGAATGCATCTT
TACCTTCGTGCCTGGGAACTTGGATATCAACACAGCGCTGCTCAGATCAC
AAACATGGCTGATATTTTAACATCAGGAACGCTATCGATACGTGCCAGTG
GTGTGCATGCAAGTCATCTGTACATGCTTGCTGGTCAACAGGGATACGCC
AGAGCGTTGCTTAACCATGGTGTGTTGCTCCTTCGAGGTGGACCTGGTAT
CAACAGAAATATCAACGAAGCTGTTCAACTAATTGCATCTGCAGCAGAGA
GAGGCCATGAGCGTGCGCTCATAAACCTGGCTATTCTGATTGAAGAAGAA
ATATCACTGGAAGGACTTGACATACCCCGCATTGTCAGATTGCTGGAACA
AGCCGAAGATGGCGGCAATCAACACGTTCTAAACGGCCTGGGCCATATTA
TGATGAACGGCGGGGTAGGGATTCGGACAGACATTCAGCGAGCTGTATGT
CTATTTGAAAGGGCGATCCAATCAGGAAGCACGCTGGCATTAAGATTTCT
TGGGACTCTTCTGGTAGGAGGCTTTGATGAGGTTCCGACGGATATTCCTC
GTGCTGTGCGATTGTATGAGCGGGCTGTTGAGAACCAGGACTCAATTGCT
GCTGAGCTTCTGGCTCGTATTTTGGTTGATGGGGTTGGAAATGTGCAAAG
CAACGCCCCACGAGCTGAGCAGCTGTTCAGAATGGCGATTGAAAACGGAA
GTATTTCAGCGAGATCTAGTTTAGCTGAACTGCTCATAGAGGGAGCTGAA
GGGGTGGAACGTAATCCACCAGAAGCCGTGAGATTACTTGAAGATGCGGT
TCAGCTAGCAGGTGACACCACTAGCATGATGAGTCTAGGACTCCTTCTCA
TCGAAGGCGGAGATGGCATTCAAAAGAACCCAGAACGTGGAATGAGCTTT
TTGGAAAGAGCTGTTGCGCAGGAAGATGCAAATGCCACACTGGTCTTAGG
ACTTGTTTTGGCCACAGGCACTGACGATATTCCCCGAAACACCAGCAGGG
CAATTCGGTTGCTCGAGCAAGCAATCGGCTTAGGTTGCGTCGACGCGCTT
TTGTGCCTTGCGAAAATGTTATTCTTCGGCGCAGAGGGCGTCAGAAAGAA
CCCGACCAGATGTGTTTCATTGCTTGAAAGAGCGGTCCGTGCGGAAAATT
ATGAAGCCATGGAATTTCTGGCATTTATACTTAGTAATGGAGCAGATGGA
ATTGCTGCCGATCCTTTTCGCGCCGTAAGCCTTTACGAGAAAGCTATCGA
AGAGGGGAACAGAGAGACGTCATTGGTAGACCTCGGGGTACTTTTATTCA
AAGGAGCTGACGGCCTTCCAAGAGACCCTTTGCGAGCATATGCGTTTTTC
CAAAAGGCCGCAGAAAACCTTGAAGAAGTTGGTATGTGCAACGCTGCAGT
GATGCTTGTCGCTGGCGTCGACGGGATTCCAAAGGACAAACCTAGAGCAA
TTGATCTGTATGAGAAAGCTATTGAGGTAAAAAATTCGGCAATGGCCAAG
GTTTCCTTGTCCATGTTTCTCTGGGTTGAAGGGCAGACTCTGCAACGCGC
TGTCCGGTTGTGTGAGGAGGCGGTTGATGAAGAATACGTACCTGCTTTTG
CGGTGTTGGCTTTGTATCTAAGAATAGGGTGCGGATTTATGGCAAGGGAT
ATACAGAGGGCGATGTATTTGTGCGAAAGAGCGTCAATGGACGAAGATGA
AGCTACACATTTGCTGACGATGGCCAATTTGTGTACGGAAGGAGAGAATA
ATTTGTACGTTGACGGGAACGCAGGTGTGGAAGCGTATGAAGCGTTACTT
GGCCATGAAAAGGATGTGACCAAAATGGTGTGGGTGAAAATTTGTCTTCG
GGACTCTTACACTACGCTGCCGTTTCGAGGGTGGCGTCATGGTGTCATGC
CCGAGAATGAAGTTGTTCTGAATGCGGTAACGCTAGCCATGGTGAACTAC
GCCAGCCTTCTCATCGACGGTTTGGAAGGGGTGCCGAGAAATGCGTCAAA
AGCGATTCAGCTGTACCGCGCCGCCATCGAAGATGACGGGTGTATCGTGG
CCATGACAAATCTTGCGTATCTGTTGTGCACACCGTCGCTGGGAGTTGGT
GTTGACTCGGACGGTGAAGAAGCGATAAGATTACTGGAGAGGGCTATCGG
GGTGTCTAAGCCGCACAACAATGTGACGGCAATGCTTGTGCTTGCCAATT
ACCTCGTGGATGATGCAAACGACGAGCACAAGAATGCTCATCGTGCGGCG
GAACTGTACGGCGCAGTCGTTGGCGACACAAACGACGCTTACGCTTTCAA
CAAGCTGTACAATCTGCTGGCGTGCGGCGCTGAGGGATTTGCGGCGGACG
GCGAAAGTGCCGACGCTCTACTCGTCAGCGCGCGGGAATGCGGAGTGGAG
ATAAGAAGAGGGGGCTGA back to topCoding sequence (CDS) from alignment at ScGOVlb_3404:4931607..4934324+ >Gvermi12462.t1 ID=Gvermi12462.t1|Name=Gvermi12462.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=CDS|length=2718bp|location=Sequence derived from alignment at ScGOVlb_3404:4931607..4934324+ (Gracilaria vermiculophylla HapMaleFtJ_2017 male) ATGGATGACCATAATCGTAATATCGAGAGAGATGAGAATCGTGGAAGCAC TAATCAGGAGCACAATGGATCTGGAAATTCGCAATACGGAGAACAAAGTG TTTATGATCTTTCCATAAGAAACCAAAACTTTCGAGAAAGCGAAGACGGA CATGAACAAACCTTATCACTGGAGGGGACCCTTGAGTCTCTTCGTCAACG AATTGAAGATGATGATCCCGAAGCGACGGCCCAATACGCAGATTTGATGG TTTCGATCAGCCAAGAGTCGCCCTCGGAACTGGTGTACGGAATGCATCTT TACCTTCGTGCCTGGGAACTTGGATATCAACACAGCGCTGCTCAGATCAC AAACATGGCTGATATTTTAACATCAGGAACGCTATCGATACGTGCCAGTG GTGTGCATGCAAGTCATCTGTACATGCTTGCTGGTCAACAGGGATACGCC AGAGCGTTGCTTAACCATGGTGTGTTGCTCCTTCGAGGTGGACCTGGTAT CAACAGAAATATCAACGAAGCTGTTCAACTAATTGCATCTGCAGCAGAGA GAGGCCATGAGCGTGCGCTCATAAACCTGGCTATTCTGATTGAAGAAGAA ATATCACTGGAAGGACTTGACATACCCCGCATTGTCAGATTGCTGGAACA AGCCGAAGATGGCGGCAATCAACACGTTCTAAACGGCCTGGGCCATATTA TGATGAACGGCGGGGTAGGGATTCGGACAGACATTCAGCGAGCTGTATGT CTATTTGAAAGGGCGATCCAATCAGGAAGCACGCTGGCATTAAGATTTCT TGGGACTCTTCTGGTAGGAGGCTTTGATGAGGTTCCGACGGATATTCCTC GTGCTGTGCGATTGTATGAGCGGGCTGTTGAGAACCAGGACTCAATTGCT GCTGAGCTTCTGGCTCGTATTTTGGTTGATGGGGTTGGAAATGTGCAAAG CAACGCCCCACGAGCTGAGCAGCTGTTCAGAATGGCGATTGAAAACGGAA GTATTTCAGCGAGATCTAGTTTAGCTGAACTGCTCATAGAGGGAGCTGAA GGGGTGGAACGTAATCCACCAGAAGCCGTGAGATTACTTGAAGATGCGGT TCAGCTAGCAGGTGACACCACTAGCATGATGAGTCTAGGACTCCTTCTCA TCGAAGGCGGAGATGGCATTCAAAAGAACCCAGAACGTGGAATGAGCTTT TTGGAAAGAGCTGTTGCGCAGGAAGATGCAAATGCCACACTGGTCTTAGG ACTTGTTTTGGCCACAGGCACTGACGATATTCCCCGAAACACCAGCAGGG CAATTCGGTTGCTCGAGCAAGCAATCGGCTTAGGTTGCGTCGACGCGCTT TTGTGCCTTGCGAAAATGTTATTCTTCGGCGCAGAGGGCGTCAGAAAGAA CCCGACCAGATGTGTTTCATTGCTTGAAAGAGCGGTCCGTGCGGAAAATT ATGAAGCCATGGAATTTCTGGCATTTATACTTAGTAATGGAGCAGATGGA ATTGCTGCCGATCCTTTTCGCGCCGTAAGCCTTTACGAGAAAGCTATCGA AGAGGGGAACAGAGAGACGTCATTGGTAGACCTCGGGGTACTTTTATTCA AAGGAGCTGACGGCCTTCCAAGAGACCCTTTGCGAGCATATGCGTTTTTC CAAAAGGCCGCAGAAAACCTTGAAGAAGTTGGTATGTGCAACGCTGCAGT GATGCTTGTCGCTGGCGTCGACGGGATTCCAAAGGACAAACCTAGAGCAA TTGATCTGTATGAGAAAGCTATTGAGGTAAAAAATTCGGCAATGGCCAAG GTTTCCTTGTCCATGTTTCTCTGGGTTGAAGGGCAGACTCTGCAACGCGC TGTCCGGTTGTGTGAGGAGGCGGTTGATGAAGAATACGTACCTGCTTTTG CGGTGTTGGCTTTGTATCTAAGAATAGGGTGCGGATTTATGGCAAGGGAT ATACAGAGGGCGATGTATTTGTGCGAAAGAGCGTCAATGGACGAAGATGA AGCTACACATTTGCTGACGATGGCCAATTTGTGTACGGAAGGAGAGAATA ATTTGTACGTTGACGGGAACGCAGGTGTGGAAGCGTATGAAGCGTTACTT GGCCATGAAAAGGATGTGACCAAAATGGTGTGGGTGAAAATTTGTCTTCG GGACTCTTACACTACGCTGCCGTTTCGAGGGTGGCGTCATGGTGTCATGC CCGAGAATGAAGTTGTTCTGAATGCGGTAACGCTAGCCATGGTGAACTAC GCCAGCCTTCTCATCGACGGTTTGGAAGGGGTGCCGAGAAATGCGTCAAA AGCGATTCAGCTGTACCGCGCCGCCATCGAAGATGACGGGTGTATCGTGG CCATGACAAATCTTGCGTATCTGTTGTGCACACCGTCGCTGGGAGTTGGT GTTGACTCGGACGGTGAAGAAGCGATAAGATTACTGGAGAGGGCTATCGG GGTGTCTAAGCCGCACAACAATGTGACGGCAATGCTTGTGCTTGCCAATT ACCTCGTGGATGATGCAAACGACGAGCACAAGAATGCTCATCGTGCGGCG GAACTGTACGGCGCAGTCGTTGGCGACACAAACGACGCTTACGCTTTCAA CAAGCTGTACAATCTGCTGGCGTGCGGCGCTGAGGGATTTGCGGCGGACG GCGAAAGTGCCGACGCTCTACTCGTCAGCGCGCGGGAATGCGGAGTGGAG ATAAGAAGAGGGGGCTGA back to top
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