Gvermi12420.t1 (mRNA) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	Gvermi12420.t1
Unique Name	Gvermi12420.t1
Type	mRNA
Organism	Gracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length	1091

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
ScGOVlb_3404	contig	ScGOVlb_3404:4662303..4665575 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.0	2022-05-09

Properties


Property Name	Value
Seed ortholog	130081.XP_005707093.1
Preferred name	RB1
PFAMs	DUF3452,RB_A,RB_B,Rb_C
Max annot lvl	2759\|Eukaryota
KEGG ko	ko:K04681,ko:K06618
KEGG Pathway	ko01522,ko04110,ko04218,ko04350,ko04934,ko05161,ko05165,ko05166,ko05167,ko05169,ko05200,ko05203,ko05212,ko05214,ko05215,ko05218,ko05219,ko05220,ko05222,ko05223,ko05224,ko05225,ko05226,map01522,map04110,map04218,map04350,map04934,map05161,map05165,map05166,map05167,map05169,map05200,map05203,map05212,map05214,map05215,map05218,map05219,map05220,map05222,map05223,map05224,map05225,map05226
KEGG Module	M00692
GOs	GO:0000003,GO:0000070,GO:0000075,GO:0000082,GO:0000083,GO:0000122,GO:0000228,GO:0000278,GO:0000280,GO:0000785,GO:0000790,GO:0000819,GO:0000902,GO:0000904,GO:0000976,GO:0000987,GO:0001047,GO:0001067,GO:0001085,GO:0001102,GO:0001558,GO:0001894,GO:0001932,GO:0001933,GO:0002262,GO:0002376,GO:0002520,GO:0002682,GO:0002684,GO:0002761,GO:0002763,GO:0003170,GO:0003176,GO:0003179,GO:0003180,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0003712,GO:0003713,GO:0005102,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005667,GO:0005694,GO:0005819,GO:0005856,GO:0006325,GO:0006338,GO:0006355,GO:0006357,GO:0006469,GO:0006915,GO:0006996,GO:0007049,GO:0007050,GO:0007059,GO:0007062,GO:0007063,GO:0007064,GO:0007088,GO:0007093,GO:0007154,GO:0007165,GO:0007264,GO:0007265,GO:0007275,GO:0007276,GO:0007283,GO:0007346,GO:0007399,GO:0007507,GO:0007517,GO:0007519,GO:0008104,GO:0008134,GO:0008150,GO:0008219,GO:0008285,GO:0008589,GO:0008608,GO:0009410,GO:0009653,GO:0009719,GO:0009725,GO:0009755,GO:0009888,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009896,GO:0009966,GO:0009968,GO:0009987,GO:0010033,GO:0010389,GO:0010468,GO:0010469,GO:0010556,GO:0010557,GO:0010558,GO:0010563,GO:0010564,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0010638,GO:0010646,GO:0010648,GO:0010941,GO:0010948,GO:0010965,GO:0012501,GO:0014070,GO:0014706,GO:0015630,GO:0016043,GO:0016514,GO:0016604,GO:0016605,GO:0019216,GO:0019219,GO:0019220,GO:0019222,GO:0019899,GO:0019900,GO:0019904,GO:0019953,GO:0021700,GO:0022008,GO:0022402,GO:0022414,GO:0023051,GO:0023052,GO:0023057,GO:0030030,GO:0030071,GO:0030097,GO:0030099,GO:0030154,GO:0030182,GO:0030218,GO:0030518,GO:0030521,GO:0030522,GO:0031134,GO:0031156,GO:0031175,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0031331,GO:0031347,GO:0031348,GO:0031399,GO:0031400,GO:0031625,GO:0031974,GO:0031981,GO:0032092,GO:0032101,GO:0032102,GO:0032103,GO:0032268,GO:0032269,GO:0032270,GO:0032436,GO:0032501,GO:0032502,GO:0032504,GO:0032870,GO:0032879,GO:0032880,GO:0032989,GO:0032991,GO:0033036,GO:0033043,GO:0033044,GO:0033045,GO:0033047,GO:0033365,GO:0033613,GO:0033673,GO:0033993,GO:0034086,GO:0034088,GO:0034101,GO:0034349,GO:0034502,GO:0034613,GO:0035189,GO:0035257,GO:0035258,GO:0035295,GO:0035556,GO:0035914,GO:0040008,GO:0040012,GO:0040017,GO:0042127,GO:0042221,GO:0042325,GO:0042326,GO:0042551,GO:0042592,GO:0042692,GO:0042802,GO:0042981,GO:0043066,GO:0043067,GO:0043069,GO:0043086,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043254,GO:0043353,GO:0043388,GO:0043393,GO:0043401,GO:0043433,GO:0043549,GO:0043550,GO:0043565,GO:0043900,GO:0044087,GO:0044092,GO:0044093,GO:0044212,GO:0044389,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044430,GO:0044446,GO:0044451,GO:0044454,GO:0044464,GO:0044703,GO:0044770,GO:0044772,GO:0044798,GO:0044843,GO:0045165,GO:0045445,GO:0045595,GO:0045596,GO:0045597,GO:0045637,GO:0045639,GO:0045649,GO:0045651,GO:0045732,GO:0045786,GO:0045787,GO:0045840,GO:0045842,GO:0045859,GO:0045862,GO:0045879,GO:0045892,GO:0045893,GO:0045930,GO:0045931,GO:0045934,GO:0045935,GO:0045936,GO:0045944,GO:0048232,GO:0048285,GO:0048468,GO:0048469,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048534,GO:0048545,GO:0048565,GO:0048583,GO:0048584,GO:0048585,GO:0048609,GO:0048666,GO:0048667,GO:0048699,GO:0048731,GO:0048856,GO:0048869,GO:0048871,GO:0048872,GO:0050678,GO:0050680,GO:0050681,GO:0050727,GO:0050728,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0050896,GO:0050920,GO:0050921,GO:0050923,GO:0050924,GO:0051090,GO:0051093,GO:0051094,GO:0051098,GO:0051099,GO:0051101,GO:0051128,GO:0051130,GO:0051146,GO:0051171,GO:0051172,GO:0051173,GO:0051174,GO:0051179,GO:0051219,GO:0051239,GO:0051240,GO:0051246,GO:0051247,GO:0051248,GO:0051252,GO:0051253,GO:0051254,GO:0051276,GO:0051301,GO:0051338,GO:0051348,GO:0051402,GO:0051427,GO:0051641,GO:0051704,GO:0051716,GO:0051726,GO:0051781,GO:0051783,GO:0051785,GO:0051983,GO:0051984,GO:0055123,GO:0060249,GO:0060255,GO:0060341,GO:0060537,GO:0060538,GO:0060548,GO:0061061,GO:0061676,GO:0062033,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070603,GO:0070727,GO:0070887,GO:0070997,GO:0071310,GO:0071383,GO:0071396,GO:0071407,GO:0071459,GO:0071466,GO:0071495,GO:0071695,GO:0071840,GO:0071922,GO:0071930,GO:0072359,GO:0080090,GO:0080134,GO:0090068,GO:0090230,GO:0090575,GO:0097159,GO:0097284,GO:0097718,GO:0098813,GO:0120036,GO:0140014,GO:0140110,GO:1900120,GO:1900122,GO:1901363,GO:1901800,GO:1901970,GO:1901987,GO:1901988,GO:1901989,GO:1901990,GO:1901991,GO:1901992,GO:1902099,GO:1902101,GO:1902105,GO:1902107,GO:1902494,GO:1902679,GO:1902680,GO:1902749,GO:1902806,GO:1902807,GO:1902903,GO:1902905,GO:1903047,GO:1903052,GO:1903053,GO:1903055,GO:1903364,GO:1903506,GO:1903507,GO:1903508,GO:1903664,GO:1903665,GO:1903667,GO:1903669,GO:1903706,GO:1903708,GO:1903827,GO:1903943,GO:1903944,GO:1904019,GO:1904026,GO:1904028,GO:1904035,GO:1904036,GO:1904760,GO:1904761,GO:1904949,GO:1905314,GO:1905634,GO:1905818,GO:1905820,GO:1990837,GO:2000026,GO:2000045,GO:2000112,GO:2000113,GO:2000134,GO:2000677,GO:2000679,GO:2001141,GO:2001252
Evalue	2.35e-22
EggNOG OGs	KOG1010@1\|root,KOG1010@2759\|Eukaryota
Description	regulation of cell cycle
COG category	A
BRITE	ko00000,ko00001,ko00002,ko01009,ko03000

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
Gvermi12420	Gvermi12420	Gracilaria vermiculophylla HapMaleFtJ_2017 male	gene	ScGOVlb_3404 4662303..4665575 -

The following stop_codon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Gvermi12420.t1.stop1	Gvermi12420.t1.stop1	Gracilaria vermiculophylla HapMaleFtJ_2017 male	stop_codon	ScGOVlb_3404 4662303..4662305 -

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Gvermi12420.t1.CDS1	Gvermi12420.t1.CDS1	Gracilaria vermiculophylla HapMaleFtJ_2017 male	CDS	ScGOVlb_3404 4662303..4665575 -

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Gvermi12420.t1.exon1	Gvermi12420.t1.exon1	Gracilaria vermiculophylla HapMaleFtJ_2017 male	exon	ScGOVlb_3404 4662303..4665575 -

The following start_codon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Gvermi12420.t1.start1	Gvermi12420.t1.start1	Gracilaria vermiculophylla HapMaleFtJ_2017 male	start_codon	ScGOVlb_3404 4665573..4665575 -

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
Gvermi12420.t1	Gvermi12420.t1	Gracilaria vermiculophylla HapMaleFtJ_2017 male	polypeptide	ScGOVlb_3404 4662303..4665575 -

Sequences

The following sequences are available for this feature:

mRNA sequence
mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at ScGOVlb_3404:4662303..4665575-
coding sequence from alignment at ScGOVlb_3404:4662303..4665575-

mRNA sequence

>Gvermi12420.t1 ID=Gvermi12420.t1|Name=Gvermi12420.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=mRNA|length=1091bp
MQTERPHQLPHSPSPDDCIDVLVHRLAFPARVANLARSIHDSAIPSPPDL
YSSACALYIASVAHRAHQIPQLPLSQLLDAANAQVRHVPEHILNAQTPQR
QTFNRSTPPSPPPASRAVRPSHTAFMVTAYVWRKLHFLIARRLLHHHPSA
PRLAWLLFIVAKASLSSPSHSGYTHVQAYHLLLACLMQSGLITADDPENA
IFRATCAVPSELHHYRRAVDTLLPPPIQQRLPFFPAPDAHLHTHLDAHCD
ALDHVYSQQLTAVDDLLVSDERIFLHAPQLAAVTAPPLSPSIRPQSSCNG
TPTPSHIPCAPPSSLPHPSSPTQSTSLPQPSSPPSTPLKRKRPLDEQSQS
ASITPRPRRRRRAADFAVTPSSARPPTPRRPRVRSTLLTPLSSPARFSRY
VSTHPDALEALATVAAVTPHCTTTLPPTPPSSNVPLTPVTDSSRSITWIS
ERREKRPETRIETYLTCPLESVPTTDGLRRVTGGGRALQAIIDVGRRYSE
ALCNVIKDLNTNRYKREALAVYFSAMEGILEKEHRRLRRQPEKFSSNVLH
NYILHKSFLTFAWETTVAAYGRRDLHVFTVAYRAFNVSPFELTKALDAFC
TLVPQMPRCLVNHLICCDARILEWMAWRRDSPLVRVLQAYSKDRVRMQEQ
TVRSPQAESEETSDGDAQMVNQTSSADSFDPKREHAEQSSPVTPQKMQGT
FSEEEPQKVLEGEVEVKGTPRLKEMERPERLYRDVEARARVLDFFYEKVF
ALAGTRTEELLRRLDLINLRTPVWRGVKYALWCRWNLVINRHVDLVILCV
IYGVAKVRHIQLQFRHIVWHYNRLDHTNDSTFLSNSPAVFRNISLEDYGH
LLTEDATEDEELKMAGIKDKTGDIIRFYNEAFVPHMRDFILPMGEDLGSF
NTDGHDAGKLAEAVGEDKADDQGAEGLNDLARRASRREGQERKEMFEDLG
RKLLQSPMRIMRTRRSPVRIGSIVVSPMSPSTRNMVLSRQNSVRRSRTNG
VGSMTPGTRALFAFGESPMGSVAVIHRRRERRRYRPLSFDGPVADARSAA
VRREVREVIGRSGRVVESYDSGEGEWDEGSGTDEDEDMGM*

spliced messenger RNA

>Gvermi12420.t1 ID=Gvermi12420.t1|Name=Gvermi12420.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=mRNA|length=3273bp|location=Sequence derived from alignment at ScGOVlb_3404:4662303..4665575- (Gracilaria vermiculophylla HapMaleFtJ_2017 male)|Notes=Excludes all bases but those of type(s): exon.  
ATGCAGACCGAACGCCCTCATCAACTGCCGCACTCGCCCTCCCCCGACGA
TTGCATCGACGTACTCGTCCATCGCCTCGCGTTTCCCGCCCGTGTCGCTA
ATCTGGCTCGTTCTATACACGACTCCGCCATCCCGTCCCCTCCCGATCTG
TACTCCTCGGCTTGTGCTTTGTACATTGCGTCCGTCGCCCACCGCGCGCA
CCAGATCCCCCAACTCCCCCTCTCACAATTGCTCGACGCCGCAAACGCCC
AAGTTCGCCACGTTCCGGAGCACATTCTCAACGCCCAAACCCCTCAACGC
CAAACGTTCAATCGCAGCACACCCCCGTCCCCACCCCCCGCAAGCCGTGC
CGTGCGTCCTTCTCACACCGCCTTCATGGTGACTGCGTACGTGTGGAGGA
AGCTTCACTTTCTCATCGCTCGCCGCTTGCTTCATCATCATCCCAGCGCC
CCACGTCTGGCTTGGCTCTTGTTCATCGTGGCAAAGGCCTCTCTGTCCTC
CCCTTCGCACTCGGGCTACACCCACGTGCAGGCCTACCACCTGCTGCTTG
CTTGCCTCATGCAGTCTGGTCTCATTACAGCCGATGATCCGGAGAACGCC
ATCTTCCGGGCAACATGCGCCGTGCCCAGCGAGCTGCACCATTATCGTCG
CGCAGTTGACACCCTCCTGCCTCCTCCTATCCAGCAACGCTTACCGTTCT
TTCCGGCTCCTGACGCTCATCTCCACACCCATCTCGACGCACACTGCGAC
GCCTTGGATCATGTTTACTCGCAACAACTTACCGCTGTCGATGATCTTCT
CGTGAGCGACGAGCGTATCTTTCTCCACGCTCCGCAGCTTGCCGCCGTCA
CTGCTCCACCTCTTTCACCCTCCATACGACCTCAGTCTTCATGCAATGGA
ACACCCACCCCGTCGCACATTCCATGTGCACCACCATCATCCCTCCCTCA
TCCTTCTTCACCCACCCAATCCACGTCATTACCTCAGCCCTCGTCTCCGC
CCTCGACGCCCCTTAAACGTAAGCGCCCCTTAGATGAACAGAGCCAGTCT
GCCTCTATTACCCCACGCCCTCGACGTCGACGAAGGGCTGCAGACTTTGC
CGTCACTCCGTCTTCAGCACGCCCGCCAACCCCTCGTCGACCACGTGTTC
GCTCCACTTTACTCACGCCGCTGTCCTCGCCGGCGCGCTTCTCTCGCTAT
GTTTCCACACACCCTGATGCATTGGAGGCGCTGGCCACAGTCGCTGCCGT
TACACCCCACTGCACAACCACGTTGCCACCTACACCTCCTTCGTCCAACG
TTCCCCTTACTCCCGTTACGGACAGTAGCCGCTCTATCACGTGGATCAGT
GAGCGACGGGAGAAGCGTCCGGAGACTCGAATCGAAACGTATCTCACATG
CCCACTGGAGAGTGTGCCCACCACGGACGGCCTGAGAAGGGTCACCGGCG
GCGGCCGCGCACTGCAGGCCATCATCGACGTTGGTCGGCGCTACTCGGAG
GCGCTGTGCAACGTGATCAAGGACCTCAACACCAACCGATACAAGCGTGA
AGCACTGGCCGTCTACTTCTCAGCCATGGAAGGCATTCTTGAAAAGGAGC
ATCGTCGGCTGCGCCGACAACCTGAAAAGTTCTCCTCCAACGTTCTTCAC
AACTATATTTTACACAAAAGTTTTCTCACCTTTGCGTGGGAGACTACTGT
CGCTGCGTACGGCAGAAGGGACCTTCACGTCTTCACGGTGGCTTACCGCG
CTTTCAATGTTTCGCCTTTTGAACTAACGAAAGCTTTGGATGCGTTTTGC
ACCCTTGTTCCTCAGATGCCACGATGCTTGGTGAATCATTTGATTTGTTG
TGATGCTCGTATCCTCGAATGGATGGCTTGGAGACGTGACTCGCCCCTGG
TTCGCGTCCTTCAGGCCTACAGCAAAGATCGGGTCCGGATGCAAGAACAG
ACAGTGCGCTCACCACAAGCTGAGTCGGAAGAAACAAGTGATGGTGACGC
ACAGATGGTCAATCAAACATCGTCAGCTGATAGCTTTGATCCGAAGCGCG
AGCATGCGGAACAGTCGTCGCCGGTGACTCCACAAAAAATGCAAGGCACG
TTTTCTGAAGAAGAACCGCAGAAAGTTCTGGAGGGAGAAGTAGAAGTGAA
GGGCACGCCAAGATTGAAGGAAATGGAGCGGCCGGAACGGCTTTACAGGG
ATGTTGAGGCTCGCGCCAGAGTTCTTGACTTTTTTTATGAAAAAGTATTT
GCCTTGGCTGGCACTAGGACTGAGGAGTTGTTGAGAAGACTTGATCTCAT
CAACTTGCGGACACCAGTGTGGAGAGGCGTGAAATACGCCTTATGGTGCC
GATGGAACTTGGTAATCAACAGACATGTTGATTTGGTCATTCTGTGCGTC
ATATACGGGGTGGCCAAGGTTCGTCATATTCAGTTGCAGTTCCGACATAT
TGTGTGGCATTATAACCGACTGGACCACACGAACGATTCAACGTTCTTGA
GCAATTCTCCAGCTGTGTTTCGCAACATCTCACTGGAAGATTACGGACAT
TTGTTGACGGAAGATGCAACTGAAGATGAAGAGTTAAAAATGGCAGGGAT
AAAGGACAAGACAGGCGACATCATTCGCTTTTACAACGAAGCGTTCGTGC
CACACATGCGAGATTTCATTTTGCCCATGGGTGAGGATTTGGGGAGTTTT
AATACAGATGGCCACGATGCAGGTAAGCTTGCAGAGGCTGTCGGCGAAGA
CAAAGCAGATGACCAGGGTGCAGAGGGTTTGAATGATCTTGCAAGACGGG
CAAGTCGAAGAGAAGGACAGGAGCGAAAGGAAATGTTTGAGGATCTTGGT
CGAAAGTTGTTGCAGAGCCCGATGCGAATCATGAGGACGAGAAGATCCCC
CGTGCGAATTGGGTCGATAGTTGTATCTCCCATGTCCCCGTCCACAAGGA
ACATGGTTCTAAGTCGACAGAACAGCGTTAGAAGAAGTAGAACTAATGGA
GTAGGCTCGATGACGCCGGGCACCCGAGCACTGTTCGCCTTTGGGGAGAG
CCCTATGGGAAGCGTTGCTGTGATACACAGAAGACGAGAAAGGAGGCGGT
ATCGACCACTGAGCTTTGATGGACCTGTTGCGGATGCGAGGTCTGCAGCA
GTTCGCCGTGAGGTGCGGGAAGTCATTGGGAGGTCAGGCCGGGTTGTGGA
AAGCTATGATAGTGGCGAGGGGGAGTGGGATGAAGGAAGTGGGACAGATG
AAGATGAAGACATGGGTATGTAA

protein sequence of Gvermi12420.t1

>Gvermi12420.t1 ID=Gvermi12420.t1|Name=Gvermi12420.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=1091bp
MQTERPHQLPHSPSPDDCIDVLVHRLAFPARVANLARSIHDSAIPSPPDL
YSSACALYIASVAHRAHQIPQLPLSQLLDAANAQVRHVPEHILNAQTPQR
QTFNRSTPPSPPPASRAVRPSHTAFMVTAYVWRKLHFLIARRLLHHHPSA
PRLAWLLFIVAKASLSSPSHSGYTHVQAYHLLLACLMQSGLITADDPENA
IFRATCAVPSELHHYRRAVDTLLPPPIQQRLPFFPAPDAHLHTHLDAHCD
ALDHVYSQQLTAVDDLLVSDERIFLHAPQLAAVTAPPLSPSIRPQSSCNG
TPTPSHIPCAPPSSLPHPSSPTQSTSLPQPSSPPSTPLKRKRPLDEQSQS
ASITPRPRRRRRAADFAVTPSSARPPTPRRPRVRSTLLTPLSSPARFSRY
VSTHPDALEALATVAAVTPHCTTTLPPTPPSSNVPLTPVTDSSRSITWIS
ERREKRPETRIETYLTCPLESVPTTDGLRRVTGGGRALQAIIDVGRRYSE
ALCNVIKDLNTNRYKREALAVYFSAMEGILEKEHRRLRRQPEKFSSNVLH
NYILHKSFLTFAWETTVAAYGRRDLHVFTVAYRAFNVSPFELTKALDAFC
TLVPQMPRCLVNHLICCDARILEWMAWRRDSPLVRVLQAYSKDRVRMQEQ
TVRSPQAESEETSDGDAQMVNQTSSADSFDPKREHAEQSSPVTPQKMQGT
FSEEEPQKVLEGEVEVKGTPRLKEMERPERLYRDVEARARVLDFFYEKVF
ALAGTRTEELLRRLDLINLRTPVWRGVKYALWCRWNLVINRHVDLVILCV
IYGVAKVRHIQLQFRHIVWHYNRLDHTNDSTFLSNSPAVFRNISLEDYGH
LLTEDATEDEELKMAGIKDKTGDIIRFYNEAFVPHMRDFILPMGEDLGSF
NTDGHDAGKLAEAVGEDKADDQGAEGLNDLARRASRREGQERKEMFEDLG
RKLLQSPMRIMRTRRSPVRIGSIVVSPMSPSTRNMVLSRQNSVRRSRTNG
VGSMTPGTRALFAFGESPMGSVAVIHRRRERRRYRPLSFDGPVADARSAA
VRREVREVIGRSGRVVESYDSGEGEWDEGSGTDEDEDMGM*

mRNA from alignment at ScGOVlb_3404:4662303..4665575-

Legend: polypeptideCDSexonstart_codonstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

>Gvermi12420.t1 ID=Gvermi12420.t1|Name=Gvermi12420.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=mRNA|length=3273bp|location=Sequence derived from alignment at ScGOVlb_3404:4662303..4665575- (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
ATGCAGACCGAACGCCCTCATCAACTGCCGCACTCGCCCTCCCCCGACGA
TTGCATCGACGTACTCGTCCATCGCCTCGCGTTTCCCGCCCGTGTCGCTA
ATCTGGCTCGTTCTATACACGACTCCGCCATCCCGTCCCCTCCCGATCTG
TACTCCTCGGCTTGTGCTTTGTACATTGCGTCCGTCGCCCACCGCGCGCA
CCAGATCCCCCAACTCCCCCTCTCACAATTGCTCGACGCCGCAAACGCCC
AAGTTCGCCACGTTCCGGAGCACATTCTCAACGCCCAAACCCCTCAACGC
CAAACGTTCAATCGCAGCACACCCCCGTCCCCACCCCCCGCAAGCCGTGC
CGTGCGTCCTTCTCACACCGCCTTCATGGTGACTGCGTACGTGTGGAGGA
AGCTTCACTTTCTCATCGCTCGCCGCTTGCTTCATCATCATCCCAGCGCC
CCACGTCTGGCTTGGCTCTTGTTCATCGTGGCAAAGGCCTCTCTGTCCTC
CCCTTCGCACTCGGGCTACACCCACGTGCAGGCCTACCACCTGCTGCTTG
CTTGCCTCATGCAGTCTGGTCTCATTACAGCCGATGATCCGGAGAACGCC
ATCTTCCGGGCAACATGCGCCGTGCCCAGCGAGCTGCACCATTATCGTCG
CGCAGTTGACACCCTCCTGCCTCCTCCTATCCAGCAACGCTTACCGTTCT
TTCCGGCTCCTGACGCTCATCTCCACACCCATCTCGACGCACACTGCGAC
GCCTTGGATCATGTTTACTCGCAACAACTTACCGCTGTCGATGATCTTCT
CGTGAGCGACGAGCGTATCTTTCTCCACGCTCCGCAGCTTGCCGCCGTCA
CTGCTCCACCTCTTTCACCCTCCATACGACCTCAGTCTTCATGCAATGGA
ACACCCACCCCGTCGCACATTCCATGTGCACCACCATCATCCCTCCCTCA
TCCTTCTTCACCCACCCAATCCACGTCATTACCTCAGCCCTCGTCTCCGC
CCTCGACGCCCCTTAAACGTAAGCGCCCCTTAGATGAACAGAGCCAGTCT
GCCTCTATTACCCCACGCCCTCGACGTCGACGAAGGGCTGCAGACTTTGC
CGTCACTCCGTCTTCAGCACGCCCGCCAACCCCTCGTCGACCACGTGTTC
GCTCCACTTTACTCACGCCGCTGTCCTCGCCGGCGCGCTTCTCTCGCTAT
GTTTCCACACACCCTGATGCATTGGAGGCGCTGGCCACAGTCGCTGCCGT
TACACCCCACTGCACAACCACGTTGCCACCTACACCTCCTTCGTCCAACG
TTCCCCTTACTCCCGTTACGGACAGTAGCCGCTCTATCACGTGGATCAGT
GAGCGACGGGAGAAGCGTCCGGAGACTCGAATCGAAACGTATCTCACATG
CCCACTGGAGAGTGTGCCCACCACGGACGGCCTGAGAAGGGTCACCGGCG
GCGGCCGCGCACTGCAGGCCATCATCGACGTTGGTCGGCGCTACTCGGAG
GCGCTGTGCAACGTGATCAAGGACCTCAACACCAACCGATACAAGCGTGA
AGCACTGGCCGTCTACTTCTCAGCCATGGAAGGCATTCTTGAAAAGGAGC
ATCGTCGGCTGCGCCGACAACCTGAAAAGTTCTCCTCCAACGTTCTTCAC
AACTATATTTTACACAAAAGTTTTCTCACCTTTGCGTGGGAGACTACTGT
CGCTGCGTACGGCAGAAGGGACCTTCACGTCTTCACGGTGGCTTACCGCG
CTTTCAATGTTTCGCCTTTTGAACTAACGAAAGCTTTGGATGCGTTTTGC
ACCCTTGTTCCTCAGATGCCACGATGCTTGGTGAATCATTTGATTTGTTG
TGATGCTCGTATCCTCGAATGGATGGCTTGGAGACGTGACTCGCCCCTGG
TTCGCGTCCTTCAGGCCTACAGCAAAGATCGGGTCCGGATGCAAGAACAG
ACAGTGCGCTCACCACAAGCTGAGTCGGAAGAAACAAGTGATGGTGACGC
ACAGATGGTCAATCAAACATCGTCAGCTGATAGCTTTGATCCGAAGCGCG
AGCATGCGGAACAGTCGTCGCCGGTGACTCCACAAAAAATGCAAGGCACG
TTTTCTGAAGAAGAACCGCAGAAAGTTCTGGAGGGAGAAGTAGAAGTGAA
GGGCACGCCAAGATTGAAGGAAATGGAGCGGCCGGAACGGCTTTACAGGG
ATGTTGAGGCTCGCGCCAGAGTTCTTGACTTTTTTTATGAAAAAGTATTT
GCCTTGGCTGGCACTAGGACTGAGGAGTTGTTGAGAAGACTTGATCTCAT
CAACTTGCGGACACCAGTGTGGAGAGGCGTGAAATACGCCTTATGGTGCC
GATGGAACTTGGTAATCAACAGACATGTTGATTTGGTCATTCTGTGCGTC
ATATACGGGGTGGCCAAGGTTCGTCATATTCAGTTGCAGTTCCGACATAT
TGTGTGGCATTATAACCGACTGGACCACACGAACGATTCAACGTTCTTGA
GCAATTCTCCAGCTGTGTTTCGCAACATCTCACTGGAAGATTACGGACAT
TTGTTGACGGAAGATGCAACTGAAGATGAAGAGTTAAAAATGGCAGGGAT
AAAGGACAAGACAGGCGACATCATTCGCTTTTACAACGAAGCGTTCGTGC
CACACATGCGAGATTTCATTTTGCCCATGGGTGAGGATTTGGGGAGTTTT
AATACAGATGGCCACGATGCAGGTAAGCTTGCAGAGGCTGTCGGCGAAGA
CAAAGCAGATGACCAGGGTGCAGAGGGTTTGAATGATCTTGCAAGACGGG
CAAGTCGAAGAGAAGGACAGGAGCGAAAGGAAATGTTTGAGGATCTTGGT
CGAAAGTTGTTGCAGAGCCCGATGCGAATCATGAGGACGAGAAGATCCCC
CGTGCGAATTGGGTCGATAGTTGTATCTCCCATGTCCCCGTCCACAAGGA
ACATGGTTCTAAGTCGACAGAACAGCGTTAGAAGAAGTAGAACTAATGGA
GTAGGCTCGATGACGCCGGGCACCCGAGCACTGTTCGCCTTTGGGGAGAG
CCCTATGGGAAGCGTTGCTGTGATACACAGAAGACGAGAAAGGAGGCGGT
ATCGACCACTGAGCTTTGATGGACCTGTTGCGGATGCGAGGTCTGCAGCA
GTTCGCCGTGAGGTGCGGGAAGTCATTGGGAGGTCAGGCCGGGTTGTGGA
AAGCTATGATAGTGGCGAGGGGGAGTGGGATGAAGGAAGTGGGACAGATG
AAGATGAAGACATGGGTATGTAA

Coding sequence (CDS) from alignment at ScGOVlb_3404:4662303..4665575-

>Gvermi12420.t1 ID=Gvermi12420.t1|Name=Gvermi12420.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=CDS|length=3273bp|location=Sequence derived from alignment at ScGOVlb_3404:4662303..4665575- (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
ATGCAGACCGAACGCCCTCATCAACTGCCGCACTCGCCCTCCCCCGACGA
TTGCATCGACGTACTCGTCCATCGCCTCGCGTTTCCCGCCCGTGTCGCTA
ATCTGGCTCGTTCTATACACGACTCCGCCATCCCGTCCCCTCCCGATCTG
TACTCCTCGGCTTGTGCTTTGTACATTGCGTCCGTCGCCCACCGCGCGCA
CCAGATCCCCCAACTCCCCCTCTCACAATTGCTCGACGCCGCAAACGCCC
AAGTTCGCCACGTTCCGGAGCACATTCTCAACGCCCAAACCCCTCAACGC
CAAACGTTCAATCGCAGCACACCCCCGTCCCCACCCCCCGCAAGCCGTGC
CGTGCGTCCTTCTCACACCGCCTTCATGGTGACTGCGTACGTGTGGAGGA
AGCTTCACTTTCTCATCGCTCGCCGCTTGCTTCATCATCATCCCAGCGCC
CCACGTCTGGCTTGGCTCTTGTTCATCGTGGCAAAGGCCTCTCTGTCCTC
CCCTTCGCACTCGGGCTACACCCACGTGCAGGCCTACCACCTGCTGCTTG
CTTGCCTCATGCAGTCTGGTCTCATTACAGCCGATGATCCGGAGAACGCC
ATCTTCCGGGCAACATGCGCCGTGCCCAGCGAGCTGCACCATTATCGTCG
CGCAGTTGACACCCTCCTGCCTCCTCCTATCCAGCAACGCTTACCGTTCT
TTCCGGCTCCTGACGCTCATCTCCACACCCATCTCGACGCACACTGCGAC
GCCTTGGATCATGTTTACTCGCAACAACTTACCGCTGTCGATGATCTTCT
CGTGAGCGACGAGCGTATCTTTCTCCACGCTCCGCAGCTTGCCGCCGTCA
CTGCTCCACCTCTTTCACCCTCCATACGACCTCAGTCTTCATGCAATGGA
ACACCCACCCCGTCGCACATTCCATGTGCACCACCATCATCCCTCCCTCA
TCCTTCTTCACCCACCCAATCCACGTCATTACCTCAGCCCTCGTCTCCGC
CCTCGACGCCCCTTAAACGTAAGCGCCCCTTAGATGAACAGAGCCAGTCT
GCCTCTATTACCCCACGCCCTCGACGTCGACGAAGGGCTGCAGACTTTGC
CGTCACTCCGTCTTCAGCACGCCCGCCAACCCCTCGTCGACCACGTGTTC
GCTCCACTTTACTCACGCCGCTGTCCTCGCCGGCGCGCTTCTCTCGCTAT
GTTTCCACACACCCTGATGCATTGGAGGCGCTGGCCACAGTCGCTGCCGT
TACACCCCACTGCACAACCACGTTGCCACCTACACCTCCTTCGTCCAACG
TTCCCCTTACTCCCGTTACGGACAGTAGCCGCTCTATCACGTGGATCAGT
GAGCGACGGGAGAAGCGTCCGGAGACTCGAATCGAAACGTATCTCACATG
CCCACTGGAGAGTGTGCCCACCACGGACGGCCTGAGAAGGGTCACCGGCG
GCGGCCGCGCACTGCAGGCCATCATCGACGTTGGTCGGCGCTACTCGGAG
GCGCTGTGCAACGTGATCAAGGACCTCAACACCAACCGATACAAGCGTGA
AGCACTGGCCGTCTACTTCTCAGCCATGGAAGGCATTCTTGAAAAGGAGC
ATCGTCGGCTGCGCCGACAACCTGAAAAGTTCTCCTCCAACGTTCTTCAC
AACTATATTTTACACAAAAGTTTTCTCACCTTTGCGTGGGAGACTACTGT
CGCTGCGTACGGCAGAAGGGACCTTCACGTCTTCACGGTGGCTTACCGCG
CTTTCAATGTTTCGCCTTTTGAACTAACGAAAGCTTTGGATGCGTTTTGC
ACCCTTGTTCCTCAGATGCCACGATGCTTGGTGAATCATTTGATTTGTTG
TGATGCTCGTATCCTCGAATGGATGGCTTGGAGACGTGACTCGCCCCTGG
TTCGCGTCCTTCAGGCCTACAGCAAAGATCGGGTCCGGATGCAAGAACAG
ACAGTGCGCTCACCACAAGCTGAGTCGGAAGAAACAAGTGATGGTGACGC
ACAGATGGTCAATCAAACATCGTCAGCTGATAGCTTTGATCCGAAGCGCG
AGCATGCGGAACAGTCGTCGCCGGTGACTCCACAAAAAATGCAAGGCACG
TTTTCTGAAGAAGAACCGCAGAAAGTTCTGGAGGGAGAAGTAGAAGTGAA
GGGCACGCCAAGATTGAAGGAAATGGAGCGGCCGGAACGGCTTTACAGGG
ATGTTGAGGCTCGCGCCAGAGTTCTTGACTTTTTTTATGAAAAAGTATTT
GCCTTGGCTGGCACTAGGACTGAGGAGTTGTTGAGAAGACTTGATCTCAT
CAACTTGCGGACACCAGTGTGGAGAGGCGTGAAATACGCCTTATGGTGCC
GATGGAACTTGGTAATCAACAGACATGTTGATTTGGTCATTCTGTGCGTC
ATATACGGGGTGGCCAAGGTTCGTCATATTCAGTTGCAGTTCCGACATAT
TGTGTGGCATTATAACCGACTGGACCACACGAACGATTCAACGTTCTTGA
GCAATTCTCCAGCTGTGTTTCGCAACATCTCACTGGAAGATTACGGACAT
TTGTTGACGGAAGATGCAACTGAAGATGAAGAGTTAAAAATGGCAGGGAT
AAAGGACAAGACAGGCGACATCATTCGCTTTTACAACGAAGCGTTCGTGC
CACACATGCGAGATTTCATTTTGCCCATGGGTGAGGATTTGGGGAGTTTT
AATACAGATGGCCACGATGCAGGTAAGCTTGCAGAGGCTGTCGGCGAAGA
CAAAGCAGATGACCAGGGTGCAGAGGGTTTGAATGATCTTGCAAGACGGG
CAAGTCGAAGAGAAGGACAGGAGCGAAAGGAAATGTTTGAGGATCTTGGT
CGAAAGTTGTTGCAGAGCCCGATGCGAATCATGAGGACGAGAAGATCCCC
CGTGCGAATTGGGTCGATAGTTGTATCTCCCATGTCCCCGTCCACAAGGA
ACATGGTTCTAAGTCGACAGAACAGCGTTAGAAGAAGTAGAACTAATGGA
GTAGGCTCGATGACGCCGGGCACCCGAGCACTGTTCGCCTTTGGGGAGAG
CCCTATGGGAAGCGTTGCTGTGATACACAGAAGACGAGAAAGGAGGCGGT
ATCGACCACTGAGCTTTGATGGACCTGTTGCGGATGCGAGGTCTGCAGCA
GTTCGCCGTGAGGTGCGGGAAGTCATTGGGAGGTCAGGCCGGGTTGTGGA
AAGCTATGATAGTGGCGAGGGGGAGTGGGATGAAGGAAGTGGGACAGATG
AAGATGAAGACATGGGTATGTAA