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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Seed ortholog | 4899.EPX72953 |
| Preferred name | fcp1 |
| PFAMs | BRCT,NIF,PTCB-BRCT |
| Max annot lvl | 4751|Fungi |
| KEGG ko | ko:K15732 |
| GOs | GO:0000428,GO:0003674,GO:0003824,GO:0004721,GO:0004722,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005829,GO:0006355,GO:0006357,GO:0006464,GO:0006470,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008420,GO:0009889,GO:0009987,GO:0010468,GO:0010556,GO:0016311,GO:0016591,GO:0016787,GO:0016788,GO:0016791,GO:0019219,GO:0019222,GO:0019538,GO:0030880,GO:0031323,GO:0031326,GO:0031974,GO:0031981,GO:0032991,GO:0036211,GO:0042578,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044451,GO:0044464,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0055029,GO:0060255,GO:0061695,GO:0065007,GO:0070013,GO:0070940,GO:0071704,GO:0080090,GO:0140096,GO:1901564,GO:1902494,GO:1903506,GO:1990234,GO:2000112,GO:2001141 |
| Evalue | 1.85e-49 |
| EggNOG OGs | COG5190@1|root,KOG0323@2759|Eukaryota,38IPM@33154|Opisthokonta,3NXKY@4751|Fungi,3QP1Q@4890|Ascomycota,3MBS6@451866|Taphrinomycotina |
| EC | 3.1.3.16 |
| Description | CTD phosphatase Fcp1 |
| COG category | L |
| BRITE | ko00000,ko01000,ko01009,ko03021 |
Relationships
This mRNA is a part of the following gene feature(s):
The following stop_codon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following start_codon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Gvermi12379.t1 ID=Gvermi12379.t1|Name=Gvermi12379.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=mRNA|length=766bp MRGFKQEHVSLPPRVLQHPEHWRLERWLVEPGCSVHREQRIAVFRSLSNA ALEYAIAPRSGKLVATFLPQHSAVDASVSPLALIEFCPHSVVFKGICAVC GETAQSLHFADTKHTVERIPVAYEAAHLAVSRAEAESRASVNARHLLASQ RLSLVLDLDHTLVHATDDARAPEMISCFPPNVDVNSVRAFQLGPVTHPTA SALMHVKLRPHLAQFLQRVSANFELHIYTMGTRAYADQIAAIIDPGKKLF GGRITSREDFAEGRLNQKSIQRLFPCDDSMVLIVDDREDVWISATGQSFM PNLVRAEPYHFWDGLHEIYNRAYATYTVQRLHEMGHQLSPPSGNVPAPTA VPAGSQVPNGGAKQRGASRPCGHAHGQEAHAICAVSGAAQRSAQTEQRDR RLADHGKADAAENENERARSAVAQNCAHTAAGTVCGAVANGNSQADAQNE RLVQNAERKDADKLENESALKVHDEQKDVCGGQGASHSDASGGALAVGNG SLSKLFSDLVKTWWEKDTDPKVSNHLLKLADVLGECHSRFFCVASRTRKE KGTVYTGPAKRFEPPADVKKVLASVRREVLRDCVLSFTGVIPTGVDPRSS ALWNLAQRLGAQCCLDYENGHCTHLVASKERGRNTRKYKQAVESGCAFVV SPAWVEACSVNFERQDEFDYQLDRDDRFKTSDELKSWVNANFAKAGSLSR KRSVVQMYDAEAGDDSTRLKRRKLDSPCPSVRDSGGRSPVAEGGMLSILS QDEIGAAIEAAFATE* back to topspliced messenger RNA >Gvermi12379.t1 ID=Gvermi12379.t1|Name=Gvermi12379.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=mRNA|length=2298bp|location=Sequence derived from alignment at ScGOVlb_3404:4437631..4439928- (Gracilaria vermiculophylla HapMaleFtJ_2017 male)|Notes=Excludes all bases but those of type(s): exon.
ATGCGTGGATTCAAACAGGAACATGTCTCACTTCCTCCGCGAGTCCTTCA ACACCCTGAACACTGGCGTCTGGAGCGCTGGCTAGTAGAGCCTGGCTGTT CGGTGCATCGAGAGCAGCGAATAGCCGTCTTCAGATCCCTGTCAAACGCC GCGCTTGAATATGCGATTGCCCCGCGTTCTGGAAAGTTAGTCGCCACATT TCTCCCACAACATTCTGCTGTAGATGCAAGTGTTTCACCGCTTGCGCTTA TTGAGTTTTGTCCTCACTCTGTAGTCTTCAAGGGCATTTGCGCCGTCTGC GGTGAAACCGCTCAGTCGCTGCACTTTGCCGACACCAAGCACACCGTCGA GCGCATCCCGGTCGCCTACGAGGCTGCGCACCTCGCCGTGTCGAGGGCTG AGGCCGAGTCGAGAGCCTCTGTCAACGCAAGACACCTGCTCGCATCGCAA CGCCTCTCCCTCGTCCTTGATCTCGATCACACGCTCGTCCACGCCACCGA CGACGCCCGTGCCCCCGAGATGATCTCCTGCTTCCCGCCGAATGTTGACG TCAACTCCGTTCGCGCCTTCCAACTCGGCCCAGTCACCCATCCAACCGCC TCCGCCCTCATGCACGTCAAGCTTCGCCCGCACCTCGCCCAGTTCCTGCA ACGCGTGTCGGCCAACTTCGAACTTCACATCTACACAATGGGCACGCGCG CGTACGCTGACCAGATTGCCGCCATCATCGACCCGGGAAAGAAGCTCTTC GGCGGCCGCATCACCAGCCGCGAGGACTTTGCCGAGGGCCGCCTCAACCA GAAGAGCATACAGCGCCTGTTCCCGTGCGACGATTCCATGGTGCTCATCG TGGACGACAGGGAAGATGTGTGGATCTCCGCAACGGGCCAGTCGTTCATG CCAAACCTCGTGCGCGCGGAGCCGTACCACTTTTGGGACGGCCTTCATGA AATCTACAACCGCGCGTACGCCACTTATACGGTGCAAAGGCTGCATGAGA TGGGGCACCAACTGTCGCCGCCATCGGGCAACGTGCCGGCGCCGACCGCC GTGCCTGCGGGCTCGCAAGTGCCCAATGGCGGTGCGAAACAGCGTGGCGC TTCGCGGCCATGTGGCCATGCGCATGGGCAAGAAGCGCACGCTATCTGCG CCGTTTCTGGCGCCGCGCAACGCTCTGCGCAAACGGAGCAACGCGATCGG CGCTTGGCAGATCACGGGAAAGCTGACGCTGCGGAGAACGAAAACGAACG CGCGCGTTCAGCTGTTGCACAAAACTGTGCGCACACCGCTGCAGGCACGG TTTGTGGAGCAGTTGCAAATGGAAACTCTCAGGCCGACGCGCAAAACGAA CGTTTGGTGCAGAACGCTGAGCGCAAAGATGCGGACAAGTTGGAAAACGA GAGCGCGCTCAAAGTGCACGACGAGCAAAAGGATGTTTGTGGCGGTCAAG GGGCGTCACATTCGGACGCTTCAGGAGGAGCATTGGCAGTTGGGAACGGT TCTTTGTCAAAGTTGTTTAGTGATCTCGTGAAAACGTGGTGGGAGAAAGA CACGGATCCCAAAGTGAGTAATCACTTGTTAAAACTAGCTGATGTGCTAG GGGAATGCCATTCACGATTCTTTTGCGTGGCAAGTCGCACTAGGAAGGAG AAGGGCACTGTGTACACCGGGCCCGCGAAACGCTTTGAGCCACCGGCGGA TGTGAAGAAAGTGCTGGCATCCGTTCGCAGAGAGGTTCTTCGCGACTGCG TGCTGAGCTTTACTGGGGTGATACCGACGGGTGTGGATCCGCGCTCTTCC GCGCTGTGGAATCTTGCGCAGAGGCTTGGAGCTCAGTGCTGCTTAGACTA TGAGAATGGGCATTGCACGCACCTGGTTGCGTCCAAGGAACGAGGTAGGA ATACAAGAAAATATAAACAAGCGGTGGAAAGCGGGTGCGCTTTTGTGGTT TCGCCGGCATGGGTGGAGGCGTGCTCAGTGAACTTTGAGAGACAAGACGA GTTTGACTACCAGCTTGACAGGGACGACAGGTTCAAGACGTCCGACGAGT TGAAGTCGTGGGTTAACGCCAACTTTGCCAAGGCAGGCTCGCTGAGTCGG AAACGAAGTGTGGTGCAAATGTACGACGCGGAAGCGGGCGATGACAGCAC GCGGTTGAAGAGGAGGAAGCTCGACTCGCCGTGCCCGAGCGTAAGGGACA GCGGGGGCCGATCGCCCGTGGCGGAGGGCGGCATGCTGTCGATTCTTTCT CAAGACGAAATCGGGGCAGCGATCGAGGCGGCGTTTGCGACGGAGTAG back to topprotein sequence of Gvermi12379.t1 >Gvermi12379.t1 ID=Gvermi12379.t1|Name=Gvermi12379.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=766bp
MRGFKQEHVSLPPRVLQHPEHWRLERWLVEPGCSVHREQRIAVFRSLSNA ALEYAIAPRSGKLVATFLPQHSAVDASVSPLALIEFCPHSVVFKGICAVC GETAQSLHFADTKHTVERIPVAYEAAHLAVSRAEAESRASVNARHLLASQ RLSLVLDLDHTLVHATDDARAPEMISCFPPNVDVNSVRAFQLGPVTHPTA SALMHVKLRPHLAQFLQRVSANFELHIYTMGTRAYADQIAAIIDPGKKLF GGRITSREDFAEGRLNQKSIQRLFPCDDSMVLIVDDREDVWISATGQSFM PNLVRAEPYHFWDGLHEIYNRAYATYTVQRLHEMGHQLSPPSGNVPAPTA VPAGSQVPNGGAKQRGASRPCGHAHGQEAHAICAVSGAAQRSAQTEQRDR RLADHGKADAAENENERARSAVAQNCAHTAAGTVCGAVANGNSQADAQNE RLVQNAERKDADKLENESALKVHDEQKDVCGGQGASHSDASGGALAVGNG SLSKLFSDLVKTWWEKDTDPKVSNHLLKLADVLGECHSRFFCVASRTRKE KGTVYTGPAKRFEPPADVKKVLASVRREVLRDCVLSFTGVIPTGVDPRSS ALWNLAQRLGAQCCLDYENGHCTHLVASKERGRNTRKYKQAVESGCAFVV SPAWVEACSVNFERQDEFDYQLDRDDRFKTSDELKSWVNANFAKAGSLSR KRSVVQMYDAEAGDDSTRLKRRKLDSPCPSVRDSGGRSPVAEGGMLSILS QDEIGAAIEAAFATE* back to topmRNA from alignment at ScGOVlb_3404:4437631..4439928- Legend: polypeptideCDSexonstart_codonstop_codon Hold the cursor over a type above to highlight its positions in the sequence below. >Gvermi12379.t1 ID=Gvermi12379.t1|Name=Gvermi12379.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=mRNA|length=2298bp|location=Sequence derived from alignment at ScGOVlb_3404:4437631..4439928- (Gracilaria vermiculophylla HapMaleFtJ_2017 male) ATGCGTGGATTCAAACAGGAACATGTCTCACTTCCTCCGCGAGTCCTTCA
ACACCCTGAACACTGGCGTCTGGAGCGCTGGCTAGTAGAGCCTGGCTGTT
CGGTGCATCGAGAGCAGCGAATAGCCGTCTTCAGATCCCTGTCAAACGCC
GCGCTTGAATATGCGATTGCCCCGCGTTCTGGAAAGTTAGTCGCCACATT
TCTCCCACAACATTCTGCTGTAGATGCAAGTGTTTCACCGCTTGCGCTTA
TTGAGTTTTGTCCTCACTCTGTAGTCTTCAAGGGCATTTGCGCCGTCTGC
GGTGAAACCGCTCAGTCGCTGCACTTTGCCGACACCAAGCACACCGTCGA
GCGCATCCCGGTCGCCTACGAGGCTGCGCACCTCGCCGTGTCGAGGGCTG
AGGCCGAGTCGAGAGCCTCTGTCAACGCAAGACACCTGCTCGCATCGCAA
CGCCTCTCCCTCGTCCTTGATCTCGATCACACGCTCGTCCACGCCACCGA
CGACGCCCGTGCCCCCGAGATGATCTCCTGCTTCCCGCCGAATGTTGACG
TCAACTCCGTTCGCGCCTTCCAACTCGGCCCAGTCACCCATCCAACCGCC
TCCGCCCTCATGCACGTCAAGCTTCGCCCGCACCTCGCCCAGTTCCTGCA
ACGCGTGTCGGCCAACTTCGAACTTCACATCTACACAATGGGCACGCGCG
CGTACGCTGACCAGATTGCCGCCATCATCGACCCGGGAAAGAAGCTCTTC
GGCGGCCGCATCACCAGCCGCGAGGACTTTGCCGAGGGCCGCCTCAACCA
GAAGAGCATACAGCGCCTGTTCCCGTGCGACGATTCCATGGTGCTCATCG
TGGACGACAGGGAAGATGTGTGGATCTCCGCAACGGGCCAGTCGTTCATG
CCAAACCTCGTGCGCGCGGAGCCGTACCACTTTTGGGACGGCCTTCATGA
AATCTACAACCGCGCGTACGCCACTTATACGGTGCAAAGGCTGCATGAGA
TGGGGCACCAACTGTCGCCGCCATCGGGCAACGTGCCGGCGCCGACCGCC
GTGCCTGCGGGCTCGCAAGTGCCCAATGGCGGTGCGAAACAGCGTGGCGC
TTCGCGGCCATGTGGCCATGCGCATGGGCAAGAAGCGCACGCTATCTGCG
CCGTTTCTGGCGCCGCGCAACGCTCTGCGCAAACGGAGCAACGCGATCGG
CGCTTGGCAGATCACGGGAAAGCTGACGCTGCGGAGAACGAAAACGAACG
CGCGCGTTCAGCTGTTGCACAAAACTGTGCGCACACCGCTGCAGGCACGG
TTTGTGGAGCAGTTGCAAATGGAAACTCTCAGGCCGACGCGCAAAACGAA
CGTTTGGTGCAGAACGCTGAGCGCAAAGATGCGGACAAGTTGGAAAACGA
GAGCGCGCTCAAAGTGCACGACGAGCAAAAGGATGTTTGTGGCGGTCAAG
GGGCGTCACATTCGGACGCTTCAGGAGGAGCATTGGCAGTTGGGAACGGT
TCTTTGTCAAAGTTGTTTAGTGATCTCGTGAAAACGTGGTGGGAGAAAGA
CACGGATCCCAAAGTGAGTAATCACTTGTTAAAACTAGCTGATGTGCTAG
GGGAATGCCATTCACGATTCTTTTGCGTGGCAAGTCGCACTAGGAAGGAG
AAGGGCACTGTGTACACCGGGCCCGCGAAACGCTTTGAGCCACCGGCGGA
TGTGAAGAAAGTGCTGGCATCCGTTCGCAGAGAGGTTCTTCGCGACTGCG
TGCTGAGCTTTACTGGGGTGATACCGACGGGTGTGGATCCGCGCTCTTCC
GCGCTGTGGAATCTTGCGCAGAGGCTTGGAGCTCAGTGCTGCTTAGACTA
TGAGAATGGGCATTGCACGCACCTGGTTGCGTCCAAGGAACGAGGTAGGA
ATACAAGAAAATATAAACAAGCGGTGGAAAGCGGGTGCGCTTTTGTGGTT
TCGCCGGCATGGGTGGAGGCGTGCTCAGTGAACTTTGAGAGACAAGACGA
GTTTGACTACCAGCTTGACAGGGACGACAGGTTCAAGACGTCCGACGAGT
TGAAGTCGTGGGTTAACGCCAACTTTGCCAAGGCAGGCTCGCTGAGTCGG
AAACGAAGTGTGGTGCAAATGTACGACGCGGAAGCGGGCGATGACAGCAC
GCGGTTGAAGAGGAGGAAGCTCGACTCGCCGTGCCCGAGCGTAAGGGACA
GCGGGGGCCGATCGCCCGTGGCGGAGGGCGGCATGCTGTCGATTCTTTCT
CAAGACGAAATCGGGGCAGCGATCGAGGCGGCGTTTGCGACGGAGTAG back to topCoding sequence (CDS) from alignment at ScGOVlb_3404:4437631..4439928- >Gvermi12379.t1 ID=Gvermi12379.t1|Name=Gvermi12379.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=CDS|length=2298bp|location=Sequence derived from alignment at ScGOVlb_3404:4437631..4439928- (Gracilaria vermiculophylla HapMaleFtJ_2017 male) ATGCGTGGATTCAAACAGGAACATGTCTCACTTCCTCCGCGAGTCCTTCA ACACCCTGAACACTGGCGTCTGGAGCGCTGGCTAGTAGAGCCTGGCTGTT CGGTGCATCGAGAGCAGCGAATAGCCGTCTTCAGATCCCTGTCAAACGCC GCGCTTGAATATGCGATTGCCCCGCGTTCTGGAAAGTTAGTCGCCACATT TCTCCCACAACATTCTGCTGTAGATGCAAGTGTTTCACCGCTTGCGCTTA TTGAGTTTTGTCCTCACTCTGTAGTCTTCAAGGGCATTTGCGCCGTCTGC GGTGAAACCGCTCAGTCGCTGCACTTTGCCGACACCAAGCACACCGTCGA GCGCATCCCGGTCGCCTACGAGGCTGCGCACCTCGCCGTGTCGAGGGCTG AGGCCGAGTCGAGAGCCTCTGTCAACGCAAGACACCTGCTCGCATCGCAA CGCCTCTCCCTCGTCCTTGATCTCGATCACACGCTCGTCCACGCCACCGA CGACGCCCGTGCCCCCGAGATGATCTCCTGCTTCCCGCCGAATGTTGACG TCAACTCCGTTCGCGCCTTCCAACTCGGCCCAGTCACCCATCCAACCGCC TCCGCCCTCATGCACGTCAAGCTTCGCCCGCACCTCGCCCAGTTCCTGCA ACGCGTGTCGGCCAACTTCGAACTTCACATCTACACAATGGGCACGCGCG CGTACGCTGACCAGATTGCCGCCATCATCGACCCGGGAAAGAAGCTCTTC GGCGGCCGCATCACCAGCCGCGAGGACTTTGCCGAGGGCCGCCTCAACCA GAAGAGCATACAGCGCCTGTTCCCGTGCGACGATTCCATGGTGCTCATCG TGGACGACAGGGAAGATGTGTGGATCTCCGCAACGGGCCAGTCGTTCATG CCAAACCTCGTGCGCGCGGAGCCGTACCACTTTTGGGACGGCCTTCATGA AATCTACAACCGCGCGTACGCCACTTATACGGTGCAAAGGCTGCATGAGA TGGGGCACCAACTGTCGCCGCCATCGGGCAACGTGCCGGCGCCGACCGCC GTGCCTGCGGGCTCGCAAGTGCCCAATGGCGGTGCGAAACAGCGTGGCGC TTCGCGGCCATGTGGCCATGCGCATGGGCAAGAAGCGCACGCTATCTGCG CCGTTTCTGGCGCCGCGCAACGCTCTGCGCAAACGGAGCAACGCGATCGG CGCTTGGCAGATCACGGGAAAGCTGACGCTGCGGAGAACGAAAACGAACG CGCGCGTTCAGCTGTTGCACAAAACTGTGCGCACACCGCTGCAGGCACGG TTTGTGGAGCAGTTGCAAATGGAAACTCTCAGGCCGACGCGCAAAACGAA CGTTTGGTGCAGAACGCTGAGCGCAAAGATGCGGACAAGTTGGAAAACGA GAGCGCGCTCAAAGTGCACGACGAGCAAAAGGATGTTTGTGGCGGTCAAG GGGCGTCACATTCGGACGCTTCAGGAGGAGCATTGGCAGTTGGGAACGGT TCTTTGTCAAAGTTGTTTAGTGATCTCGTGAAAACGTGGTGGGAGAAAGA CACGGATCCCAAAGTGAGTAATCACTTGTTAAAACTAGCTGATGTGCTAG GGGAATGCCATTCACGATTCTTTTGCGTGGCAAGTCGCACTAGGAAGGAG AAGGGCACTGTGTACACCGGGCCCGCGAAACGCTTTGAGCCACCGGCGGA TGTGAAGAAAGTGCTGGCATCCGTTCGCAGAGAGGTTCTTCGCGACTGCG TGCTGAGCTTTACTGGGGTGATACCGACGGGTGTGGATCCGCGCTCTTCC GCGCTGTGGAATCTTGCGCAGAGGCTTGGAGCTCAGTGCTGCTTAGACTA TGAGAATGGGCATTGCACGCACCTGGTTGCGTCCAAGGAACGAGGTAGGA ATACAAGAAAATATAAACAAGCGGTGGAAAGCGGGTGCGCTTTTGTGGTT TCGCCGGCATGGGTGGAGGCGTGCTCAGTGAACTTTGAGAGACAAGACGA GTTTGACTACCAGCTTGACAGGGACGACAGGTTCAAGACGTCCGACGAGT TGAAGTCGTGGGTTAACGCCAACTTTGCCAAGGCAGGCTCGCTGAGTCGG AAACGAAGTGTGGTGCAAATGTACGACGCGGAAGCGGGCGATGACAGCAC GCGGTTGAAGAGGAGGAAGCTCGACTCGCCGTGCCCGAGCGTAAGGGACA GCGGGGGCCGATCGCCCGTGGCGGAGGGCGGCATGCTGTCGATTCTTTCT CAAGACGAAATCGGGGCAGCGATCGAGGCGGCGTTTGCGACGGAGTAG back to top
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