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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Seed ortholog | 112098.XP_008616131.1 |
| PFAMs | Lipase_3 |
| Max annot lvl | 2759|Eukaryota |
| Evalue | 6.33e-44 |
| EggNOG OGs | KOG4569@1|root,KOG4569@2759|Eukaryota |
| Description | phospholipase A1 activity |
| COG category | G |
Relationships
This mRNA is a part of the following gene feature(s):
The following stop_codon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following start_codon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Gvermi12291.t1 ID=Gvermi12291.t1|Name=Gvermi12291.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=mRNA|length=840bp MSFVKHSKAEEASYPMDTSDDIENWNVVLDQDSPGISQEVNSVRFVIPKT SSRHSKLSKPCDDFSVVSSESGDEDEGRSYGFSAARKEEAVSINLSGKTF TKLEVIGAEEVTKLLWWFHGFILFGILFSIVFVAMANTVYLRLDSIRGTM VRYYNLPLTYEWVLSVANILCFFYATSLAIVFTSRMLRIRRADRTHEQVW VILLTIAAAIYMNPYESIVRIMINADYNLREEKWYDPISRMYDSVRDASF TASTLFYVWATVHSYRVLTGKLGVRFYIPKVLLIIVYMLLKQFAFWRFDI YMSEMPIASMVAMLHLYKALNFWPVKGVVFVTLVTAFELLLVAWIIREIR ITRSFLKGKDYTKYRTKQIGIRFFLYHNLTFYLVFWLCYLLLLLGLPSGA QLAAMKVFNVSYVEVQYVPFGLSILYLSYVSVEAYMNLPSDAIGLKGWLR PQAPRLNGMLEPITYRKREPTSQLVQTNCFVMETHVIMFNFAWLVYYYGT PKMSKLNSMQNKRDYEVRKVVSDEGTDTRVLIVDRDDRIIVAFRGTSSNR NLRTDLKAFHVQLNRILPTSSEEDASIGPFGSIAQEALESRDAQRAKLHR GFAEAYLSVADEVMHGIKELYDSDQRPIFLTGHSLGGALATICALDCALK HHLGTNDIYVATFGSPRVGNSAFRKVYDELVPATWRVSIAADIVTTLPKV EYQHVGKKIMLTTAGDLFIDPNSLELSMWSGDSLSFVHHRKASYLLAMRS WCNRHERGAYKPQFWNWPFSSDDERRWPAAMSPDLRDDAHREHRRNLLHQ DAMIDALNESKAENMEERAADNWSRLTRRLLLNSAIHKV* back to topspliced messenger RNA >Gvermi12291.t1 ID=Gvermi12291.t1|Name=Gvermi12291.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=mRNA|length=2520bp|location=Sequence derived from alignment at ScGOVlb_3404:4107829..4110348- (Gracilaria vermiculophylla HapMaleFtJ_2017 male)|Notes=Excludes all bases but those of type(s): exon.
ATGTCATTTGTCAAACATTCAAAGGCGGAGGAAGCATCTTACCCCATGGA TACATCCGATGACATTGAGAATTGGAACGTGGTTCTCGACCAAGACAGCC CCGGTATCTCGCAGGAAGTAAATTCTGTTCGGTTCGTCATTCCTAAAACA AGTTCAAGGCACTCAAAGCTATCGAAGCCTTGCGATGATTTTTCCGTTGT ATCTTCAGAGTCTGGGGACGAAGATGAGGGAAGGAGCTACGGATTTTCAG CCGCTCGGAAAGAAGAGGCAGTATCCATCAATCTTAGTGGGAAGACATTC ACAAAACTTGAAGTCATTGGTGCTGAAGAAGTCACAAAATTGCTATGGTG GTTTCATGGATTCATTTTATTTGGTATATTGTTTTCCATTGTGTTTGTCG CGATGGCCAACACTGTTTATCTTCGGTTGGACTCTATTCGTGGGACCATG GTTCGCTATTACAATCTACCATTGACTTACGAATGGGTGCTCTCCGTGGC AAACATTTTATGTTTCTTCTATGCGACATCATTGGCCATTGTGTTTACAT CTCGAATGTTGCGGATTCGTCGAGCAGATCGAACTCACGAGCAAGTATGG GTGATTCTTTTGACAATTGCCGCAGCCATATATATGAATCCCTACGAGAG CATTGTTCGAATCATGATCAATGCCGATTACAACCTTCGAGAGGAGAAAT GGTATGACCCAATTTCTCGAATGTACGATTCTGTACGGGATGCGTCATTT ACCGCAAGCACTCTGTTTTATGTGTGGGCAACTGTACATTCATATCGTGT TCTGACCGGAAAGCTTGGAGTAAGGTTTTATATTCCCAAGGTACTCTTGA TCATTGTATATATGCTACTCAAGCAATTTGCGTTTTGGCGTTTTGATATA TACATGTCAGAAATGCCTATTGCATCAATGGTGGCGATGTTGCACCTTTA CAAAGCTTTGAATTTCTGGCCTGTGAAAGGAGTTGTATTTGTAACTCTAG TTACTGCGTTCGAGTTACTTCTTGTGGCATGGATTATTCGAGAGATTCGA ATTACCCGTAGCTTTCTGAAAGGAAAGGATTACACGAAGTATCGCACGAA ACAGATCGGAATTCGTTTCTTCTTATACCACAATTTAACGTTTTATTTAG TATTCTGGCTGTGCTATCTGCTTCTGCTTCTCGGCCTCCCTTCCGGGGCT CAGTTGGCAGCGATGAAGGTGTTCAATGTATCATATGTCGAGGTCCAGTA TGTTCCATTCGGTCTGTCTATATTGTATCTTTCATATGTCTCTGTAGAGG CCTATATGAATCTACCTTCAGATGCCATTGGTTTGAAAGGATGGCTGCGC CCACAAGCTCCGAGATTAAATGGAATGCTAGAACCGATTACGTACAGAAA GCGGGAACCAACCTCTCAACTGGTGCAGACAAATTGTTTTGTAATGGAAA CCCATGTTATCATGTTTAATTTTGCATGGCTTGTGTATTACTATGGAACT CCAAAGATGTCAAAGCTGAATAGTATGCAGAACAAACGTGATTATGAAGT TAGAAAGGTTGTGTCCGACGAAGGAACAGATACGCGTGTACTCATTGTAG ACCGTGACGACCGCATCATTGTTGCTTTTCGAGGGACAAGCAGTAACCGT AACTTACGCACTGACTTGAAAGCATTCCATGTCCAGCTAAACCGCATTCT GCCAACGTCATCAGAAGAAGACGCTTCGATAGGCCCATTTGGGAGCATTG CACAAGAAGCGCTGGAAAGTCGTGATGCCCAGCGAGCAAAACTACATCGT GGGTTTGCGGAGGCGTATTTGAGCGTTGCAGACGAAGTCATGCATGGGAT CAAAGAGCTCTACGATTCCGATCAACGCCCAATATTCCTCACCGGCCACA GTCTTGGTGGTGCTCTAGCGACCATTTGCGCTCTTGACTGCGCACTGAAG CACCACTTAGGCACAAACGACATTTACGTCGCAACGTTCGGCTCCCCCAG GGTGGGAAATTCAGCGTTCAGAAAAGTTTACGACGAATTGGTACCTGCCA CATGGCGAGTGTCTATCGCAGCAGACATTGTAACCACCTTGCCCAAAGTG GAATATCAACATGTTGGGAAAAAAATAATGCTTACCACGGCAGGTGATTT ATTCATTGATCCTAACTCTTTGGAGCTTTCAATGTGGAGTGGTGATTCAT TATCTTTTGTCCATCATCGCAAGGCTTCTTATCTCCTCGCAATGCGGTCG TGGTGCAACCGGCATGAAAGAGGGGCATACAAACCTCAATTTTGGAATTG GCCGTTCTCTTCAGATGATGAGAGACGATGGCCGGCTGCGATGTCTCCAG ATTTAAGAGATGATGCTCATCGTGAACATCGCCGCAACCTACTTCACCAA GATGCTATGATTGACGCGCTCAACGAAAGTAAGGCTGAGAACATGGAAGA ACGAGCTGCTGACAATTGGTCACGATTGACTCGACGCCTTCTGTTGAACA GCGCTATACACAAGGTATGA back to topprotein sequence of Gvermi12291.t1 >Gvermi12291.t1 ID=Gvermi12291.t1|Name=Gvermi12291.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=840bp
MSFVKHSKAEEASYPMDTSDDIENWNVVLDQDSPGISQEVNSVRFVIPKT SSRHSKLSKPCDDFSVVSSESGDEDEGRSYGFSAARKEEAVSINLSGKTF TKLEVIGAEEVTKLLWWFHGFILFGILFSIVFVAMANTVYLRLDSIRGTM VRYYNLPLTYEWVLSVANILCFFYATSLAIVFTSRMLRIRRADRTHEQVW VILLTIAAAIYMNPYESIVRIMINADYNLREEKWYDPISRMYDSVRDASF TASTLFYVWATVHSYRVLTGKLGVRFYIPKVLLIIVYMLLKQFAFWRFDI YMSEMPIASMVAMLHLYKALNFWPVKGVVFVTLVTAFELLLVAWIIREIR ITRSFLKGKDYTKYRTKQIGIRFFLYHNLTFYLVFWLCYLLLLLGLPSGA QLAAMKVFNVSYVEVQYVPFGLSILYLSYVSVEAYMNLPSDAIGLKGWLR PQAPRLNGMLEPITYRKREPTSQLVQTNCFVMETHVIMFNFAWLVYYYGT PKMSKLNSMQNKRDYEVRKVVSDEGTDTRVLIVDRDDRIIVAFRGTSSNR NLRTDLKAFHVQLNRILPTSSEEDASIGPFGSIAQEALESRDAQRAKLHR GFAEAYLSVADEVMHGIKELYDSDQRPIFLTGHSLGGALATICALDCALK HHLGTNDIYVATFGSPRVGNSAFRKVYDELVPATWRVSIAADIVTTLPKV EYQHVGKKIMLTTAGDLFIDPNSLELSMWSGDSLSFVHHRKASYLLAMRS WCNRHERGAYKPQFWNWPFSSDDERRWPAAMSPDLRDDAHREHRRNLLHQ DAMIDALNESKAENMEERAADNWSRLTRRLLLNSAIHKV* back to topmRNA from alignment at ScGOVlb_3404:4107829..4110348- Legend: polypeptideCDSexonstart_codonstop_codon Hold the cursor over a type above to highlight its positions in the sequence below. >Gvermi12291.t1 ID=Gvermi12291.t1|Name=Gvermi12291.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=mRNA|length=2520bp|location=Sequence derived from alignment at ScGOVlb_3404:4107829..4110348- (Gracilaria vermiculophylla HapMaleFtJ_2017 male) ATGTCATTTGTCAAACATTCAAAGGCGGAGGAAGCATCTTACCCCATGGA
TACATCCGATGACATTGAGAATTGGAACGTGGTTCTCGACCAAGACAGCC
CCGGTATCTCGCAGGAAGTAAATTCTGTTCGGTTCGTCATTCCTAAAACA
AGTTCAAGGCACTCAAAGCTATCGAAGCCTTGCGATGATTTTTCCGTTGT
ATCTTCAGAGTCTGGGGACGAAGATGAGGGAAGGAGCTACGGATTTTCAG
CCGCTCGGAAAGAAGAGGCAGTATCCATCAATCTTAGTGGGAAGACATTC
ACAAAACTTGAAGTCATTGGTGCTGAAGAAGTCACAAAATTGCTATGGTG
GTTTCATGGATTCATTTTATTTGGTATATTGTTTTCCATTGTGTTTGTCG
CGATGGCCAACACTGTTTATCTTCGGTTGGACTCTATTCGTGGGACCATG
GTTCGCTATTACAATCTACCATTGACTTACGAATGGGTGCTCTCCGTGGC
AAACATTTTATGTTTCTTCTATGCGACATCATTGGCCATTGTGTTTACAT
CTCGAATGTTGCGGATTCGTCGAGCAGATCGAACTCACGAGCAAGTATGG
GTGATTCTTTTGACAATTGCCGCAGCCATATATATGAATCCCTACGAGAG
CATTGTTCGAATCATGATCAATGCCGATTACAACCTTCGAGAGGAGAAAT
GGTATGACCCAATTTCTCGAATGTACGATTCTGTACGGGATGCGTCATTT
ACCGCAAGCACTCTGTTTTATGTGTGGGCAACTGTACATTCATATCGTGT
TCTGACCGGAAAGCTTGGAGTAAGGTTTTATATTCCCAAGGTACTCTTGA
TCATTGTATATATGCTACTCAAGCAATTTGCGTTTTGGCGTTTTGATATA
TACATGTCAGAAATGCCTATTGCATCAATGGTGGCGATGTTGCACCTTTA
CAAAGCTTTGAATTTCTGGCCTGTGAAAGGAGTTGTATTTGTAACTCTAG
TTACTGCGTTCGAGTTACTTCTTGTGGCATGGATTATTCGAGAGATTCGA
ATTACCCGTAGCTTTCTGAAAGGAAAGGATTACACGAAGTATCGCACGAA
ACAGATCGGAATTCGTTTCTTCTTATACCACAATTTAACGTTTTATTTAG
TATTCTGGCTGTGCTATCTGCTTCTGCTTCTCGGCCTCCCTTCCGGGGCT
CAGTTGGCAGCGATGAAGGTGTTCAATGTATCATATGTCGAGGTCCAGTA
TGTTCCATTCGGTCTGTCTATATTGTATCTTTCATATGTCTCTGTAGAGG
CCTATATGAATCTACCTTCAGATGCCATTGGTTTGAAAGGATGGCTGCGC
CCACAAGCTCCGAGATTAAATGGAATGCTAGAACCGATTACGTACAGAAA
GCGGGAACCAACCTCTCAACTGGTGCAGACAAATTGTTTTGTAATGGAAA
CCCATGTTATCATGTTTAATTTTGCATGGCTTGTGTATTACTATGGAACT
CCAAAGATGTCAAAGCTGAATAGTATGCAGAACAAACGTGATTATGAAGT
TAGAAAGGTTGTGTCCGACGAAGGAACAGATACGCGTGTACTCATTGTAG
ACCGTGACGACCGCATCATTGTTGCTTTTCGAGGGACAAGCAGTAACCGT
AACTTACGCACTGACTTGAAAGCATTCCATGTCCAGCTAAACCGCATTCT
GCCAACGTCATCAGAAGAAGACGCTTCGATAGGCCCATTTGGGAGCATTG
CACAAGAAGCGCTGGAAAGTCGTGATGCCCAGCGAGCAAAACTACATCGT
GGGTTTGCGGAGGCGTATTTGAGCGTTGCAGACGAAGTCATGCATGGGAT
CAAAGAGCTCTACGATTCCGATCAACGCCCAATATTCCTCACCGGCCACA
GTCTTGGTGGTGCTCTAGCGACCATTTGCGCTCTTGACTGCGCACTGAAG
CACCACTTAGGCACAAACGACATTTACGTCGCAACGTTCGGCTCCCCCAG
GGTGGGAAATTCAGCGTTCAGAAAAGTTTACGACGAATTGGTACCTGCCA
CATGGCGAGTGTCTATCGCAGCAGACATTGTAACCACCTTGCCCAAAGTG
GAATATCAACATGTTGGGAAAAAAATAATGCTTACCACGGCAGGTGATTT
ATTCATTGATCCTAACTCTTTGGAGCTTTCAATGTGGAGTGGTGATTCAT
TATCTTTTGTCCATCATCGCAAGGCTTCTTATCTCCTCGCAATGCGGTCG
TGGTGCAACCGGCATGAAAGAGGGGCATACAAACCTCAATTTTGGAATTG
GCCGTTCTCTTCAGATGATGAGAGACGATGGCCGGCTGCGATGTCTCCAG
ATTTAAGAGATGATGCTCATCGTGAACATCGCCGCAACCTACTTCACCAA
GATGCTATGATTGACGCGCTCAACGAAAGTAAGGCTGAGAACATGGAAGA
ACGAGCTGCTGACAATTGGTCACGATTGACTCGACGCCTTCTGTTGAACA
GCGCTATACACAAGGTATGA back to topCoding sequence (CDS) from alignment at ScGOVlb_3404:4107829..4110348- >Gvermi12291.t1 ID=Gvermi12291.t1|Name=Gvermi12291.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=CDS|length=2520bp|location=Sequence derived from alignment at ScGOVlb_3404:4107829..4110348- (Gracilaria vermiculophylla HapMaleFtJ_2017 male) ATGTCATTTGTCAAACATTCAAAGGCGGAGGAAGCATCTTACCCCATGGA TACATCCGATGACATTGAGAATTGGAACGTGGTTCTCGACCAAGACAGCC CCGGTATCTCGCAGGAAGTAAATTCTGTTCGGTTCGTCATTCCTAAAACA AGTTCAAGGCACTCAAAGCTATCGAAGCCTTGCGATGATTTTTCCGTTGT ATCTTCAGAGTCTGGGGACGAAGATGAGGGAAGGAGCTACGGATTTTCAG CCGCTCGGAAAGAAGAGGCAGTATCCATCAATCTTAGTGGGAAGACATTC ACAAAACTTGAAGTCATTGGTGCTGAAGAAGTCACAAAATTGCTATGGTG GTTTCATGGATTCATTTTATTTGGTATATTGTTTTCCATTGTGTTTGTCG CGATGGCCAACACTGTTTATCTTCGGTTGGACTCTATTCGTGGGACCATG GTTCGCTATTACAATCTACCATTGACTTACGAATGGGTGCTCTCCGTGGC AAACATTTTATGTTTCTTCTATGCGACATCATTGGCCATTGTGTTTACAT CTCGAATGTTGCGGATTCGTCGAGCAGATCGAACTCACGAGCAAGTATGG GTGATTCTTTTGACAATTGCCGCAGCCATATATATGAATCCCTACGAGAG CATTGTTCGAATCATGATCAATGCCGATTACAACCTTCGAGAGGAGAAAT GGTATGACCCAATTTCTCGAATGTACGATTCTGTACGGGATGCGTCATTT ACCGCAAGCACTCTGTTTTATGTGTGGGCAACTGTACATTCATATCGTGT TCTGACCGGAAAGCTTGGAGTAAGGTTTTATATTCCCAAGGTACTCTTGA TCATTGTATATATGCTACTCAAGCAATTTGCGTTTTGGCGTTTTGATATA TACATGTCAGAAATGCCTATTGCATCAATGGTGGCGATGTTGCACCTTTA CAAAGCTTTGAATTTCTGGCCTGTGAAAGGAGTTGTATTTGTAACTCTAG TTACTGCGTTCGAGTTACTTCTTGTGGCATGGATTATTCGAGAGATTCGA ATTACCCGTAGCTTTCTGAAAGGAAAGGATTACACGAAGTATCGCACGAA ACAGATCGGAATTCGTTTCTTCTTATACCACAATTTAACGTTTTATTTAG TATTCTGGCTGTGCTATCTGCTTCTGCTTCTCGGCCTCCCTTCCGGGGCT CAGTTGGCAGCGATGAAGGTGTTCAATGTATCATATGTCGAGGTCCAGTA TGTTCCATTCGGTCTGTCTATATTGTATCTTTCATATGTCTCTGTAGAGG CCTATATGAATCTACCTTCAGATGCCATTGGTTTGAAAGGATGGCTGCGC CCACAAGCTCCGAGATTAAATGGAATGCTAGAACCGATTACGTACAGAAA GCGGGAACCAACCTCTCAACTGGTGCAGACAAATTGTTTTGTAATGGAAA CCCATGTTATCATGTTTAATTTTGCATGGCTTGTGTATTACTATGGAACT CCAAAGATGTCAAAGCTGAATAGTATGCAGAACAAACGTGATTATGAAGT TAGAAAGGTTGTGTCCGACGAAGGAACAGATACGCGTGTACTCATTGTAG ACCGTGACGACCGCATCATTGTTGCTTTTCGAGGGACAAGCAGTAACCGT AACTTACGCACTGACTTGAAAGCATTCCATGTCCAGCTAAACCGCATTCT GCCAACGTCATCAGAAGAAGACGCTTCGATAGGCCCATTTGGGAGCATTG CACAAGAAGCGCTGGAAAGTCGTGATGCCCAGCGAGCAAAACTACATCGT GGGTTTGCGGAGGCGTATTTGAGCGTTGCAGACGAAGTCATGCATGGGAT CAAAGAGCTCTACGATTCCGATCAACGCCCAATATTCCTCACCGGCCACA GTCTTGGTGGTGCTCTAGCGACCATTTGCGCTCTTGACTGCGCACTGAAG CACCACTTAGGCACAAACGACATTTACGTCGCAACGTTCGGCTCCCCCAG GGTGGGAAATTCAGCGTTCAGAAAAGTTTACGACGAATTGGTACCTGCCA CATGGCGAGTGTCTATCGCAGCAGACATTGTAACCACCTTGCCCAAAGTG GAATATCAACATGTTGGGAAAAAAATAATGCTTACCACGGCAGGTGATTT ATTCATTGATCCTAACTCTTTGGAGCTTTCAATGTGGAGTGGTGATTCAT TATCTTTTGTCCATCATCGCAAGGCTTCTTATCTCCTCGCAATGCGGTCG TGGTGCAACCGGCATGAAAGAGGGGCATACAAACCTCAATTTTGGAATTG GCCGTTCTCTTCAGATGATGAGAGACGATGGCCGGCTGCGATGTCTCCAG ATTTAAGAGATGATGCTCATCGTGAACATCGCCGCAACCTACTTCACCAA GATGCTATGATTGACGCGCTCAACGAAAGTAAGGCTGAGAACATGGAAGA ACGAGCTGCTGACAATTGGTCACGATTGACTCGACGCCTTCTGTTGAACA GCGCTATACACAAGGTATGA back to top
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