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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Seed ortholog | 130081.XP_005706935.1 |
| Preferred name | LIPE |
| PFAMs | Abhydrolase_3,HSL_N |
| Max annot lvl | 2759|Eukaryota |
| KEGG ko | ko:K07188,ko:K12389 |
| KEGG Pathway | ko04024,ko04142,ko04152,ko04371,ko04714,ko04910,ko04923,ko04925,map04024,map04142,map04152,map04371,map04714,map04910,map04923,map04925 |
| GOs | GO:0000003,GO:0001676,GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0004806,GO:0005488,GO:0005515,GO:0005575,GO:0005576,GO:0005615,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005739,GO:0005811,GO:0005829,GO:0005886,GO:0005901,GO:0006082,GO:0006139,GO:0006351,GO:0006352,GO:0006353,GO:0006360,GO:0006361,GO:0006363,GO:0006464,GO:0006468,GO:0006629,GO:0006631,GO:0006638,GO:0006639,GO:0006641,GO:0006642,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0007565,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009059,GO:0009062,GO:0009987,GO:0010467,GO:0016020,GO:0016042,GO:0016054,GO:0016070,GO:0016298,GO:0016310,GO:0016787,GO:0016788,GO:0017171,GO:0018130,GO:0019433,GO:0019438,GO:0019538,GO:0019752,GO:0019843,GO:0019899,GO:0019900,GO:0019901,GO:0022414,GO:0032501,GO:0032774,GO:0032787,GO:0034641,GO:0034645,GO:0034654,GO:0036211,GO:0042134,GO:0042221,GO:0042493,GO:0042758,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043412,GO:0043436,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044249,GO:0044255,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044282,GO:0044421,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0044703,GO:0044706,GO:0044853,GO:0045121,GO:0046339,GO:0046340,GO:0046395,GO:0046461,GO:0046464,GO:0046483,GO:0046486,GO:0046503,GO:0047372,GO:0050896,GO:0051704,GO:0052689,GO:0071704,GO:0071944,GO:0072329,GO:0090304,GO:0097159,GO:0097659,GO:0098589,GO:0098590,GO:0098805,GO:0098857,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901575,GO:1901576 |
| Evalue | 1.43e-116 |
| EggNOG OGs | COG0657@1|root,KOG4388@2759|Eukaryota |
| EC | 3.1.1.79 |
| Description | hormone-sensitive lipase activity |
| COG category | I |
| BRITE | ko00000,ko00001,ko01000 |
Relationships
This mRNA is a part of the following gene feature(s):
The following start_codon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following stop_codon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Gvermi12196.t1 ID=Gvermi12196.t1|Name=Gvermi12196.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=mRNA|length=749bp MSLSDELHRAARACQGAADALSHSLRPGSSQSQLSALQIDTFREAEAFSI TVRTVMDKLEPIMPLLECGAACVGKQARVRGSSAVCNGIDTLVHILLSLF NTSNNAILDASGVRSRSLLPPLNAASCFEKMVTHHGQLRAMYGIIHLMSK IIEHVDVSQTLFLPVSEGTEADRDFEPAKFRAAIKLDDFYGRGFGFHYAP EVRNVLRVVNIARGSVHKSHVDHDPSPQFVKNVFMLGWGWVYSNMVLMDN LGFSIDGVSRIGVDENEMSIITLRKFMNLVEEPLVAGVSSFTSADVAINS MFLVPQPGAEGGMEPVDSPWHSERLREVFRTIHTPVRARLMSCKNRPIAP AKPATEIPKKQRAMSSTSSKPEVVVPTMTSVPANGRTHRPRVSPISKPNI QHVNATIAAAAKTSVASTEGSFKVEDGGPSLTKTASGWSDVVEKSYLASA FKSSVTSIHTNVSSFLGIEEAKPAVGLIIHFHGGGFVSQSTSSHQAFMKE ICADIPDSVMFSVDYKLAPEYKYPIALHECTYAYLWALQNASRLGTLAER VVFVGDSAGGNLAVAVALLAVELGFRPPDAVCVAYPALHIKSAWSPSRLL SFFDPLLPLSVLEFCLKSYVGESCPDHDSPLLSPTLASDEQLRRLPPVTL LCGSLDPLLDDSALFVHRLRNAGREQDCLKVYDGMPHGFMNMIQVSISAR RALHFLAKQISVALQVPLSKRTGLVDVEEDDSKRSRLEGELILSGENA* back to topspliced messenger RNA >Gvermi12196.t1 ID=Gvermi12196.t1|Name=Gvermi12196.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=mRNA|length=2247bp|location=Sequence derived from alignment at ScGOVlb_3404:3806641..3808887+ (Gracilaria vermiculophylla HapMaleFtJ_2017 male)|Notes=Excludes all bases but those of type(s): exon.
ATGTCGCTCTCAGACGAATTACATCGTGCGGCTCGCGCCTGTCAAGGCGC TGCTGATGCCTTGTCCCATTCTCTGCGTCCTGGTTCATCACAGTCACAAC TTTCTGCATTGCAAATAGACACTTTTCGCGAAGCCGAAGCGTTTTCCATC ACTGTTCGTACAGTAATGGATAAGCTTGAACCCATCATGCCACTCCTGGA ATGCGGAGCGGCATGTGTTGGAAAACAAGCACGGGTGAGAGGATCGTCTG CAGTTTGCAATGGCATTGACACACTCGTACACATCCTTTTATCTCTTTTC AACACTTCGAACAATGCAATACTGGATGCCTCTGGAGTGAGATCAAGGTC TCTACTCCCACCCCTGAATGCTGCATCATGTTTTGAGAAGATGGTGACGC ACCATGGCCAGCTTCGGGCTATGTACGGCATAATACATCTGATGTCGAAA ATCATAGAACATGTAGATGTGTCTCAAACCCTCTTTTTGCCTGTATCGGA AGGTACAGAAGCGGACCGTGACTTTGAACCAGCCAAATTTCGGGCTGCTA TCAAGCTAGATGACTTCTATGGTCGCGGTTTTGGTTTTCATTATGCACCA GAGGTGCGAAACGTCTTGCGTGTCGTTAATATTGCACGAGGATCAGTGCA CAAATCTCACGTTGATCACGATCCTTCCCCTCAATTTGTCAAGAACGTTT TTATGCTTGGATGGGGCTGGGTTTATTCGAACATGGTTCTGATGGACAAC CTAGGATTTTCTATTGATGGTGTTTCCCGTATTGGTGTTGATGAGAATGA GATGTCCATCATTACGTTGCGAAAGTTTATGAACCTTGTTGAAGAGCCTC TGGTAGCTGGTGTTAGTAGCTTTACAAGTGCGGATGTTGCTATCAACAGC ATGTTCTTGGTGCCTCAGCCTGGTGCCGAGGGAGGCATGGAGCCCGTTGA TAGCCCGTGGCACAGTGAACGTCTTCGAGAAGTTTTCAGAACTATCCATA CGCCTGTGCGAGCGCGCTTAATGAGCTGCAAAAACCGCCCGATAGCGCCT GCAAAACCCGCCACAGAGATTCCAAAGAAGCAACGGGCGATGTCTTCCAC CTCATCAAAACCGGAAGTAGTGGTACCAACAATGACAAGCGTGCCAGCAA ACGGGCGAACTCATCGTCCTCGCGTTTCGCCAATATCGAAGCCAAACATT CAGCACGTCAATGCAACCATCGCCGCGGCCGCGAAAACTTCAGTCGCTTC AACTGAAGGTTCTTTCAAGGTTGAAGACGGAGGTCCATCCTTAACGAAGA CGGCAAGTGGATGGAGTGATGTCGTGGAAAAGAGCTATCTCGCATCGGCG TTCAAATCGAGTGTCACTTCCATCCACACCAACGTTTCCTCCTTCTTAGG CATAGAAGAAGCAAAACCCGCTGTCGGTTTAATCATTCATTTTCATGGTG GAGGGTTTGTGTCACAGAGTACGTCCAGTCACCAAGCATTTATGAAGGAG ATATGTGCAGACATTCCCGACTCGGTAATGTTTTCCGTTGACTACAAATT AGCTCCAGAGTACAAGTATCCAATAGCTCTCCACGAATGTACTTACGCTT ACCTTTGGGCTCTGCAGAACGCTAGTCGGCTTGGAACACTTGCGGAGCGC GTCGTGTTTGTTGGAGACTCTGCAGGGGGAAATCTAGCGGTGGCCGTTGC GTTGCTTGCCGTAGAGCTTGGTTTTCGTCCTCCTGATGCTGTTTGTGTTG CATATCCCGCGCTTCACATAAAGAGCGCTTGGAGCCCTTCGCGTTTACTA TCGTTTTTTGACCCGCTGCTTCCTCTTTCGGTGTTGGAATTCTGTTTGAA GTCGTACGTGGGAGAAAGCTGTCCTGATCACGACAGCCCACTGCTTTCGC CCACATTAGCGTCTGATGAACAATTGCGACGCTTACCGCCGGTAACATTG CTTTGTGGATCTTTAGATCCTCTGCTGGATGATTCCGCGTTGTTTGTGCA CCGGCTACGAAACGCAGGACGCGAACAGGATTGCCTAAAAGTTTACGATG GTATGCCGCACGGATTCATGAATATGATTCAAGTGAGTATATCTGCTCGT CGGGCTTTGCATTTTTTGGCCAAGCAGATCTCCGTCGCTCTTCAAGTACC GCTCAGCAAGCGCACGGGTCTCGTAGATGTGGAAGAAGACGACAGCAAAC GCAGTAGATTAGAGGGGGAACTGATTTTGTCCGGTGAAAACGCATAG back to topprotein sequence of Gvermi12196.t1 >Gvermi12196.t1 ID=Gvermi12196.t1|Name=Gvermi12196.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=749bp
MSLSDELHRAARACQGAADALSHSLRPGSSQSQLSALQIDTFREAEAFSI TVRTVMDKLEPIMPLLECGAACVGKQARVRGSSAVCNGIDTLVHILLSLF NTSNNAILDASGVRSRSLLPPLNAASCFEKMVTHHGQLRAMYGIIHLMSK IIEHVDVSQTLFLPVSEGTEADRDFEPAKFRAAIKLDDFYGRGFGFHYAP EVRNVLRVVNIARGSVHKSHVDHDPSPQFVKNVFMLGWGWVYSNMVLMDN LGFSIDGVSRIGVDENEMSIITLRKFMNLVEEPLVAGVSSFTSADVAINS MFLVPQPGAEGGMEPVDSPWHSERLREVFRTIHTPVRARLMSCKNRPIAP AKPATEIPKKQRAMSSTSSKPEVVVPTMTSVPANGRTHRPRVSPISKPNI QHVNATIAAAAKTSVASTEGSFKVEDGGPSLTKTASGWSDVVEKSYLASA FKSSVTSIHTNVSSFLGIEEAKPAVGLIIHFHGGGFVSQSTSSHQAFMKE ICADIPDSVMFSVDYKLAPEYKYPIALHECTYAYLWALQNASRLGTLAER VVFVGDSAGGNLAVAVALLAVELGFRPPDAVCVAYPALHIKSAWSPSRLL SFFDPLLPLSVLEFCLKSYVGESCPDHDSPLLSPTLASDEQLRRLPPVTL LCGSLDPLLDDSALFVHRLRNAGREQDCLKVYDGMPHGFMNMIQVSISAR RALHFLAKQISVALQVPLSKRTGLVDVEEDDSKRSRLEGELILSGENA* back to topmRNA from alignment at ScGOVlb_3404:3806641..3808887+ Legend: start_codonpolypeptideCDSexonstop_codon Hold the cursor over a type above to highlight its positions in the sequence below. >Gvermi12196.t1 ID=Gvermi12196.t1|Name=Gvermi12196.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=mRNA|length=2247bp|location=Sequence derived from alignment at ScGOVlb_3404:3806641..3808887+ (Gracilaria vermiculophylla HapMaleFtJ_2017 male) ATGTCGCTCTCAGACGAATTACATCGTGCGGCTCGCGCCTGTCAAGGCGC
TGCTGATGCCTTGTCCCATTCTCTGCGTCCTGGTTCATCACAGTCACAAC
TTTCTGCATTGCAAATAGACACTTTTCGCGAAGCCGAAGCGTTTTCCATC
ACTGTTCGTACAGTAATGGATAAGCTTGAACCCATCATGCCACTCCTGGA
ATGCGGAGCGGCATGTGTTGGAAAACAAGCACGGGTGAGAGGATCGTCTG
CAGTTTGCAATGGCATTGACACACTCGTACACATCCTTTTATCTCTTTTC
AACACTTCGAACAATGCAATACTGGATGCCTCTGGAGTGAGATCAAGGTC
TCTACTCCCACCCCTGAATGCTGCATCATGTTTTGAGAAGATGGTGACGC
ACCATGGCCAGCTTCGGGCTATGTACGGCATAATACATCTGATGTCGAAA
ATCATAGAACATGTAGATGTGTCTCAAACCCTCTTTTTGCCTGTATCGGA
AGGTACAGAAGCGGACCGTGACTTTGAACCAGCCAAATTTCGGGCTGCTA
TCAAGCTAGATGACTTCTATGGTCGCGGTTTTGGTTTTCATTATGCACCA
GAGGTGCGAAACGTCTTGCGTGTCGTTAATATTGCACGAGGATCAGTGCA
CAAATCTCACGTTGATCACGATCCTTCCCCTCAATTTGTCAAGAACGTTT
TTATGCTTGGATGGGGCTGGGTTTATTCGAACATGGTTCTGATGGACAAC
CTAGGATTTTCTATTGATGGTGTTTCCCGTATTGGTGTTGATGAGAATGA
GATGTCCATCATTACGTTGCGAAAGTTTATGAACCTTGTTGAAGAGCCTC
TGGTAGCTGGTGTTAGTAGCTTTACAAGTGCGGATGTTGCTATCAACAGC
ATGTTCTTGGTGCCTCAGCCTGGTGCCGAGGGAGGCATGGAGCCCGTTGA
TAGCCCGTGGCACAGTGAACGTCTTCGAGAAGTTTTCAGAACTATCCATA
CGCCTGTGCGAGCGCGCTTAATGAGCTGCAAAAACCGCCCGATAGCGCCT
GCAAAACCCGCCACAGAGATTCCAAAGAAGCAACGGGCGATGTCTTCCAC
CTCATCAAAACCGGAAGTAGTGGTACCAACAATGACAAGCGTGCCAGCAA
ACGGGCGAACTCATCGTCCTCGCGTTTCGCCAATATCGAAGCCAAACATT
CAGCACGTCAATGCAACCATCGCCGCGGCCGCGAAAACTTCAGTCGCTTC
AACTGAAGGTTCTTTCAAGGTTGAAGACGGAGGTCCATCCTTAACGAAGA
CGGCAAGTGGATGGAGTGATGTCGTGGAAAAGAGCTATCTCGCATCGGCG
TTCAAATCGAGTGTCACTTCCATCCACACCAACGTTTCCTCCTTCTTAGG
CATAGAAGAAGCAAAACCCGCTGTCGGTTTAATCATTCATTTTCATGGTG
GAGGGTTTGTGTCACAGAGTACGTCCAGTCACCAAGCATTTATGAAGGAG
ATATGTGCAGACATTCCCGACTCGGTAATGTTTTCCGTTGACTACAAATT
AGCTCCAGAGTACAAGTATCCAATAGCTCTCCACGAATGTACTTACGCTT
ACCTTTGGGCTCTGCAGAACGCTAGTCGGCTTGGAACACTTGCGGAGCGC
GTCGTGTTTGTTGGAGACTCTGCAGGGGGAAATCTAGCGGTGGCCGTTGC
GTTGCTTGCCGTAGAGCTTGGTTTTCGTCCTCCTGATGCTGTTTGTGTTG
CATATCCCGCGCTTCACATAAAGAGCGCTTGGAGCCCTTCGCGTTTACTA
TCGTTTTTTGACCCGCTGCTTCCTCTTTCGGTGTTGGAATTCTGTTTGAA
GTCGTACGTGGGAGAAAGCTGTCCTGATCACGACAGCCCACTGCTTTCGC
CCACATTAGCGTCTGATGAACAATTGCGACGCTTACCGCCGGTAACATTG
CTTTGTGGATCTTTAGATCCTCTGCTGGATGATTCCGCGTTGTTTGTGCA
CCGGCTACGAAACGCAGGACGCGAACAGGATTGCCTAAAAGTTTACGATG
GTATGCCGCACGGATTCATGAATATGATTCAAGTGAGTATATCTGCTCGT
CGGGCTTTGCATTTTTTGGCCAAGCAGATCTCCGTCGCTCTTCAAGTACC
GCTCAGCAAGCGCACGGGTCTCGTAGATGTGGAAGAAGACGACAGCAAAC
GCAGTAGATTAGAGGGGGAACTGATTTTGTCCGGTGAAAACGCATAG back to topCoding sequence (CDS) from alignment at ScGOVlb_3404:3806641..3808887+ >Gvermi12196.t1 ID=Gvermi12196.t1|Name=Gvermi12196.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=CDS|length=2247bp|location=Sequence derived from alignment at ScGOVlb_3404:3806641..3808887+ (Gracilaria vermiculophylla HapMaleFtJ_2017 male) ATGTCGCTCTCAGACGAATTACATCGTGCGGCTCGCGCCTGTCAAGGCGC TGCTGATGCCTTGTCCCATTCTCTGCGTCCTGGTTCATCACAGTCACAAC TTTCTGCATTGCAAATAGACACTTTTCGCGAAGCCGAAGCGTTTTCCATC ACTGTTCGTACAGTAATGGATAAGCTTGAACCCATCATGCCACTCCTGGA ATGCGGAGCGGCATGTGTTGGAAAACAAGCACGGGTGAGAGGATCGTCTG CAGTTTGCAATGGCATTGACACACTCGTACACATCCTTTTATCTCTTTTC AACACTTCGAACAATGCAATACTGGATGCCTCTGGAGTGAGATCAAGGTC TCTACTCCCACCCCTGAATGCTGCATCATGTTTTGAGAAGATGGTGACGC ACCATGGCCAGCTTCGGGCTATGTACGGCATAATACATCTGATGTCGAAA ATCATAGAACATGTAGATGTGTCTCAAACCCTCTTTTTGCCTGTATCGGA AGGTACAGAAGCGGACCGTGACTTTGAACCAGCCAAATTTCGGGCTGCTA TCAAGCTAGATGACTTCTATGGTCGCGGTTTTGGTTTTCATTATGCACCA GAGGTGCGAAACGTCTTGCGTGTCGTTAATATTGCACGAGGATCAGTGCA CAAATCTCACGTTGATCACGATCCTTCCCCTCAATTTGTCAAGAACGTTT TTATGCTTGGATGGGGCTGGGTTTATTCGAACATGGTTCTGATGGACAAC CTAGGATTTTCTATTGATGGTGTTTCCCGTATTGGTGTTGATGAGAATGA GATGTCCATCATTACGTTGCGAAAGTTTATGAACCTTGTTGAAGAGCCTC TGGTAGCTGGTGTTAGTAGCTTTACAAGTGCGGATGTTGCTATCAACAGC ATGTTCTTGGTGCCTCAGCCTGGTGCCGAGGGAGGCATGGAGCCCGTTGA TAGCCCGTGGCACAGTGAACGTCTTCGAGAAGTTTTCAGAACTATCCATA CGCCTGTGCGAGCGCGCTTAATGAGCTGCAAAAACCGCCCGATAGCGCCT GCAAAACCCGCCACAGAGATTCCAAAGAAGCAACGGGCGATGTCTTCCAC CTCATCAAAACCGGAAGTAGTGGTACCAACAATGACAAGCGTGCCAGCAA ACGGGCGAACTCATCGTCCTCGCGTTTCGCCAATATCGAAGCCAAACATT CAGCACGTCAATGCAACCATCGCCGCGGCCGCGAAAACTTCAGTCGCTTC AACTGAAGGTTCTTTCAAGGTTGAAGACGGAGGTCCATCCTTAACGAAGA CGGCAAGTGGATGGAGTGATGTCGTGGAAAAGAGCTATCTCGCATCGGCG TTCAAATCGAGTGTCACTTCCATCCACACCAACGTTTCCTCCTTCTTAGG CATAGAAGAAGCAAAACCCGCTGTCGGTTTAATCATTCATTTTCATGGTG GAGGGTTTGTGTCACAGAGTACGTCCAGTCACCAAGCATTTATGAAGGAG ATATGTGCAGACATTCCCGACTCGGTAATGTTTTCCGTTGACTACAAATT AGCTCCAGAGTACAAGTATCCAATAGCTCTCCACGAATGTACTTACGCTT ACCTTTGGGCTCTGCAGAACGCTAGTCGGCTTGGAACACTTGCGGAGCGC GTCGTGTTTGTTGGAGACTCTGCAGGGGGAAATCTAGCGGTGGCCGTTGC GTTGCTTGCCGTAGAGCTTGGTTTTCGTCCTCCTGATGCTGTTTGTGTTG CATATCCCGCGCTTCACATAAAGAGCGCTTGGAGCCCTTCGCGTTTACTA TCGTTTTTTGACCCGCTGCTTCCTCTTTCGGTGTTGGAATTCTGTTTGAA GTCGTACGTGGGAGAAAGCTGTCCTGATCACGACAGCCCACTGCTTTCGC CCACATTAGCGTCTGATGAACAATTGCGACGCTTACCGCCGGTAACATTG CTTTGTGGATCTTTAGATCCTCTGCTGGATGATTCCGCGTTGTTTGTGCA CCGGCTACGAAACGCAGGACGCGAACAGGATTGCCTAAAAGTTTACGATG GTATGCCGCACGGATTCATGAATATGATTCAAGTGAGTATATCTGCTCGT CGGGCTTTGCATTTTTTGGCCAAGCAGATCTCCGTCGCTCTTCAAGTACC GCTCAGCAAGCGCACGGGTCTCGTAGATGTGGAAGAAGACGACAGCAAAC GCAGTAGATTAGAGGGGGAACTGATTTTGTCCGGTGAAAACGCATAG back to top
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